Puntigrus tetrazona (Sumatra barb): 122345458
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Entry
122345458 CDS
T08985
Symbol
cacna1ba
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04010
MAPK signaling pathway
ptet04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122345458 (cacna1ba)
04020 Calcium signaling pathway
122345458 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122345458 (cacna1ba)
Ion channels [BR:
ptet04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122345458 (cacna1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
122345458
NCBI-ProteinID:
XP_043095530
LinkDB
All DBs
Position
5:8725190..8816007
Genome browser
AA seq
2375 aa
AA seq
DB search
MARFEDDLPTRYGGGGSPAGPGRGANRQPGPLGGQRMYKQTMAQRARTMAIYNPIPVKQN
CLTVNRSLFIFSEDNIIRKYAKKITEWPPFEYMILATIIANCIVLGLEQHLPALDKTPMS
KRLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILTIVGPDFD
LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMG
KFHMTCFRNDTDEQVADFPCGSESPARLCEGDTECRGYWTGPNFGITNFDNILFAVLTVF
QCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEK
RQEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKEDGAWYKRKCNNPVLKRA
KKSKNDLINAEEGEDHFTDISSVAPQGSPFTRTSVKSSKNESSSYFRRKEKRFRFFIRRM
VKAQSFYWTVLCIVGLNTLCVAIVHYDQPEWLTYALYLAEFVFLGLFLIEMSLKMYGLGP
RTYFHSSFNCFDFGVIVGSIFEVIWAAVKPGASFGISVLRALRLLRIFKVTKYWNSLRNL
VVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVFQ
ILTGEDWNAVMYHGIESQGGVHRGMFCSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQEL
TKDEEEQEEAISKKLALQKAKEVKEVSPMSAANISITAFIRPNPGALSRSSSNSSSHSPS
YVCSPAHHYLSKEQQRSLKMMSVWEQRTTQIRKHMLASSEALYQEELNPRLTSNLHLRPD
MKTHLDRPLVVEPQCDGPISPHRGWDKPQDQQGEGGTPEERVPPAIEPPQSHPPRKHHRH
RERPSNETNENGDTGHGKEGRHHVHHSRTKEHDGTRCKEGKSDRSRSREGGRRHHHQSSV
DEGVGVGEREHRHHHSHRHSREGNGVVSAGKSERRIRQKDGSRSGTREGERCSRGENGGN
GGRRRHRPRTSKAQSTLEGEEQRGNGDQDEGKLHSHRHTDMGGDSLAVNPHQPSVWNRRC
HEKPEDLDNKQNIGQTGGMGTHIPVTVTSPPGETTLIPMNSIDSETMPMTEKNLEDLNQS
NPRPILPFSSMFIFSQTNPVRRLCHYIVSLRYFEMCILVVIAMSSIALAAEDPVHANSPR
NDVLKYLDYVFTGVFTFEMVIKMVDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFTSL
MGSHQSVNSRGNKAKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILI
VYILFMFIFAVIAVQLFKGKFFYCTDESKSLEKDCRGLFLDYDKDEVAAQPREWRKYEFH
YDNVLWGFLTLFTVSTGEGWPTVLKHSVDATFEDQGPSPGYRMEMSIFYVVYFVVFPFFF
VNIFVALIIITFQEQGDKALSECSLEKNERACIDFAINAKPLTRYMPQNQQSFQYRLWKF
VVSPPFEYSVMIMIALNTVVLMMKFHGAPNFYDSMLKYLNIVFTALFSMECILKIIAFGP
LNYLKDAWNVFDFVTVLGSITDIVVTEIKTMDRLLNLSFLRLFRAARLVKLLRQGYTIRI
LLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIDLNDDTAINRHNNFRTFLQALML
LFRSATGEAWHEIMLSCLSERSCDANSGNSDKECGSDFAYFYFVSFIFLCSFLMLNLFVA
VIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRVKYLDMYEMLLHMSPPLGLGKK
CPPRIAYKRLVKMNMPIADDNSVHFTSTLMALIRTALEIKLASGMVAQRLSDAELKKELA
TVWPNLSQKTMDLLVTPHKPNELTVGKVYAALMIFDYYKQNRAKRLQMQQQQLREQAGPG
SQNKVSALLEPILPLTHMQDQPVNSVDSASEFQPQTRPSSTTLNNGRTHLDNTIKGSSSW
ASEKSKEVPSSKRRPMSRGQSEDASNANTAQESVEMREMENSANTVTSGGLEGQGRAVSM
PKLNAEMQRSHSRHSPGTLLETIPDSPMRRSASTFAPQRPQEVNLNDYTLAKPVQERHHH
HHHHHRCHHRRDRDKKQRSLDRSPTGQHKAAGTAADPVEERPHDRGRSHERKHHSSSTEK
QRYYSCDRYGSREHCPSKSAVASCATSPSEAQEASLNKQGSGWAKGSPVLLTSGASTPSR
GRRQLPQTPLTPRPSVAYRTANSSPVQFLGTQAGLLPPSPGRLSRGLSEHNALLHSGSIS
SSPAPVSRINSEPFLGPPDHPAGLQPETYAVFQEDPIPQTARSAQTLVMPIVAIPPPPQQ
QFRGVPNGYHFIKGPGASRGRARQYYPEAEVDDWC
NT seq
7128 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcgaagacgatctcccgacccggtacggaggcggtggctctccagcgggt
ccaggcagaggggccaaccggcagccaggccccctgggcggacagaggatgtacaagcaa
acaatggcccaaagagcccggacaatggccatatacaacccgataccggtcaaacagaac
tgtctcaccgtcaaccgatccctgttcatcttcagcgaagataatatcattcggaaatat
gcaaagaaaataacagagtggcctccatttgagtacatgattcttgccaccattatagca
aactgcattgtactgggcttagagcagcatttaccagctttagacaagacgcctatgtca
aagcgactggacgacactgaaccctacttcatcgggatattttgcttcgaggccgggatc
aagatcatcgctctaggctttgcttttcataaaggctcctacctccgcaatgggtggaat
gttatggactttgttgtggttttgacagggattctgaccatagtggggccagactttgat
ttgcggacactcagggcagtaagagtcttgcggccactcaaactggtgtctggaattcca
agtctccaagtggttctgaagtccatcatgaaagcaatggttcctctgcttcaaattggc
cttctgctcttttttgctatactcatgtttgccatcattggcctagacttctacatgggc
aagtttcacatgacctgcttcagaaacgatactgacgaacaggtagctgactttccatgt
ggaagcgaatctccagctcggttgtgtgaaggggacacagaatgtaggggatactggacc
ggtccaaacttcgggattacaaactttgacaacatcctattcgctgtgctcaccgtcttc
cagtgcatcactatggaaggatgggtggacatcctttacaatgccaacgatgcctcaggg
aacacctggaactggctctacttcatcccactcatcatcatcggctctttcttcatgctc
aacttggttctgggtgtgctgtcaggggagtttgcaaaggagcgagagcgcgtggagaaa
aggcaggagttcctgaagcttcgcagacaacagcagatcgagagagagctgaccggctac
ctggagtggatctgcaaagcagaggaagtcatgcttgctgaagaagataaaaacgcagaa
gaaaaggaggatggtgcctggtacaagaggaaatgcaacaacccagtattgaagagagcc
aagaagagtaaaaatgacctcatcaatgcagaggaaggagaagaccacttcaccgacatc
tcatcagtcgctccccagggctctccattcacccgtacaagcgtgaagagcagcaagaac
gagagctcatcgtactttcgcaggaaagagaagaggtttcgcttcttcatccgccgtatg
gtgaaggcccagagcttctactggactgttctgtgtatagtgggactgaacacactgtgt
gtggctatagttcactacgaccagcccgagtggctcacatatgcactgtatttggcggag
tttgtgttccttggtctatttctaatagagatgagtctgaagatgtatggcctcgggccc
aggacatactttcactcctcatttaactgctttgactttggggtgatcgtgggtagcatt
ttcgaggtgatttgggcagcggtaaaaccaggagcctcttttggcattagtgtcttgcga
gccctgcgattgctgaggatattcaaggttaccaagtattggaactcgttacggaacctg
gtggtgtctctgctcaactcaatgaagtccatcatcagtcttctgttcctgctgtttctc
ttcattgtagtgtttgctctgctggggatgcagctctttggaggacagtttaattttgaa
gatgagaccccgacgaccaactttgacacattcccagctgctatcctgacagtgtttcag
attctgacaggagaggactggaatgctgtgatgtatcatggaattgaatcccagggagga
gttcaccggggaatgttctgctcagtgtacttcattgtgctcacattgtttggaaactac
actctcctcaatgtctttttggccatcgctgttgataatcttgccaatgcgcaagaactc
accaaggatgaggaggagcaggaggaggccatcagtaagaaactggctctgcagaaagcc
aaggaggtaaaggaggtcagccccatgtcggccgcaaacatttccatcacagcttttata
aggccaaatcccggtgctctttcacgcagctcctccaactccagctctcattcaccgagt
tatgtctgctcccctgcacatcactacttgagtaaagaacagcagcgttctctaaagatg
atgtccgtgtgggagcagcgcaccacgcagattcggaagcacatgctggctagcagcgaa
gcgttgtaccaagaggagctcaacccccggctgacctccaaccttcatctccgccctgac
atgaaaacccacctggaccggcctctggtggtggaaccccaatgtgatggtcccatcagt
ccccacagaggctgggacaaaccgcaggaccagcaaggggagggtggcacaccagaggaa
cgagtaccccctgcgattgagcccccacagtcacacccaccacgcaaacaccaccgtcac
agggagcggccctccaacgagaccaatgaaaacggtgacacaggtcatggcaaagaaggc
cggcatcacgtccatcacagccgcactaaggagcacgatgggacacggtgcaaggagggg
aagagtgacaggagccggagccgagagggaggccgcagacatcaccatcagagctccgtg
gatgagggagtcggagtcggggagagggaacatcgtcaccatcactctcacaggcatagc
agagagggcaatggagtggtcagcgcagggaagagtgaacggcggatcaggcagaaggat
ggctcacgttcgggaacaagggaaggggagaggtgctccaggggcgaaaatggaggtaac
ggaggaaggagacggcaccgaccacggaccagtaaagctcagtcgacactggaaggagag
gagcaacgagggaatggagatcaggatgagggcaagttacacagccacaggcacactgac
atgggaggagattcattggctgtaaatccccatcaaccttcagtttggaaccgacggtgt
catgagaaaccagaagacttggacaataaacaaaatattggtcagactggaggaatgggc
acacacatacctgtgaccgtcacgtctccccctggagaaacaacccttattcctatgaac
agtatagacagtgagacaatgcccatgactgagaagaatctggaggatctgaaccagagc
aaccctcgtcccatccttcccttcagctccatgttcattttcagccaaaccaatccggtg
agacgcctgtgccactacatagtgagcctgcgctactttgagatgtgtatactggtggta
attgccatgagcagtatagccctggctgcggaggacccagtccatgcaaattcccctcgt
aacgatgtcctgaagtatttagactatgtcttcactggtgtcttcacatttgagatggtc
attaagatggtggatttaggtttactgcttcatcctggttcctacttcagagatctgtgg
aacattctggacttcattgtggtcagtggtgcactggtggcattcgcattcacgagctta
atgggatcacatcaaagcgtaaacagtagaggtaacaaggccaaagacatcaacactatc
aagtccctgagggtgttgcgagtcttgcgaccactgaagaccattaaacgactaccaaaa
ctgaaggccgtgtttgactgtgtggtcaactccctgaagaacgtgttgaatatcctcatt
gtctacatcctgttcatgttcatcttcgctgtcattgctgtacagctcttcaagggcaag
tttttctactgcacagacgagtccaaaagcctggagaaagactgcagagggctgttcttg
gattacgataaggatgaagtggcggctcagcccagggaatggaggaagtatgaattccac
tacgacaatgtgctgtgggggtttctcactctcttcaccgtttctactggagagggctgg
ccaacggttttgaagcactctgtagatgccacttttgaagaccaaggtcctagtccaggt
taccgcatggagatgtccatcttctacgtggtctacttcgtggtctttccctttttcttc
gtcaacattttcgtggccttaataattattacattccaggaacagggtgataaggccttg
tcagagtgcagtctggagaagaatgagagagcctgcatcgacttcgctatcaatgccaaa
ccgctgacccgctatatgccacagaaccagcagtcctttcagtaccgcttatggaagttt
gtggtttctccaccgtttgagtactccgtaatgatcatgatcgctctcaacactgtggtg
ctcatgatgaagttccatggggcacctaatttttatgattctatgctcaagtatctcaac
attgttttcactgctctcttttcaatggagtgtattctcaagattattgctttcggcccc
ttgaattacctgaaagatgcctggaatgtgtttgactttgtgactgtgctgggcagcatc
actgacatcgtagtcactgagattaaaactatggaccgtctgttgaacttgagtttcctg
aggctcttcagagcagccagactcgtcaaactcctccggcaggggtacaccattcgcatc
ctgctctggacattcgtccaatcttttaaggcactgccttatgtttgccttttaatcgcc
atgctgtttttcatctacgccatcattggaatgcaggtgtttgggaacattgacttgaat
gatgataccgccatcaatcgtcacaacaactttcgcactttcctccaagcccttatgctg
ttattcaggagtgccactggcgaagcctggcatgagattatgttgtcctgtctgagtgag
cgctcctgtgacgcaaactcaggcaattcagacaaagaatgcgggagtgactttgcctac
ttctacttcgtctccttcattttcctttgttctttcttgatgttgaacctgtttgtggct
gtcattatggacaactttgaatatctgacacgtgactcctccatcttgggccctcaccac
ctggatgagtttatccgagtgtgggcggagtatgacccagccgcatgtggccgtgtcaag
tacctcgatatgtatgagatgctgctccacatgtccccacctttaggtttgggaaagaaa
tgccctccacgaatcgcctacaagcggctggtgaaaatgaacatgcccattgcagatgac
aacagtgtgcacttcacctcaaccctgatggctctgatccgtacagccttggagatcaaa
ctggcttcaggtatggtggcccaacgtctgtcagacgctgaactgaaaaaggagcttgct
acagtctggccaaacctgtctcagaagactatggacctgctggtcactccacacaaaccc
aatgagcttacggtggggaaggtgtatgcggctcttatgatttttgactattataaacaa
aacagagctaagagacttcagatgcagcaacagcagctgagagaacaggcaggacctgga
tctcagaataaagtcagtgctcttctagagcctattctcccactaacccacatgcaagat
cagcctgtgaacagtgtagattcagcctcagagtttcaacctcagaccagacccagctcc
accacgctcaacaacggacgcacacatcttgacaacacaataaagggatcatcatcctgg
gcctcagagaagtccaaggaggtcccatcatctaaacgaaggccaatgtccagaggtcaa
tcagaggatgcctcaaatgcaaacactgcccaggagtcggtagaaatgagagagatggaa
aacagtgccaacacagtgacctctggcggcctcgaaggccaaggacgtgcagtatccatg
ccaaaactcaacgcagagatgcagaggagtcattctcgtcattctcctgggactttactg
gaaaccattcccgattcccccatgagacgctccgcatccacttttgcaccacagcgccct
caggaggtgaatctgaatgactacactctagcgaaacctgttcaagaacgacaccaccac
caccaccatcatcaccgatgccaccatcgtagggacagagacaagaaacagagatccctg
gacaggtcgcccactggacaacacaaagctgcaggcacagcagctgaccctgtagaggag
aggccacatgaccgaggtcgttcccatgagaggaagcatcattcgtcttcgactgagaag
cagcggtattactcttgtgatcgctacggcagtcgggaacactgtcccagcaagtctgcc
gtggcaagctgtgccacctcgcccagcgaggcccaggaggccagtctcaacaagcagggc
agtgggtgggctaaggggagcccggtgttgttgacctcaggggcgagcactccaagccgt
gggcgcagacagctgccccagaccccccttactcctcgtccctccgtggcctacaggact
gccaactcttcccctgtgcaatttctgggcacacaggccggcttgcttcccccgagtccc
ggcaggctgagccgcggtctgtccgagcacaacgccctcttacacagcggctccatctcc
agctcgccggcccccgtcagtcgcattaactcagaacccttcttggggcccccggaccac
cctgccggcctccagcccgaaacctatgctgtcttccaagaggatcccatccctcagacg
gcccgctctgcccagactttagtgatgccgattgtggcgattcccccacctccacaacag
cagttccgtggagttcccaacggataccacttcatcaagggccccggggccagcagagga
cgggcacggcagtactacccagaggcagaggtggacgactggtgctag
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