Puntigrus tetrazona (Sumatra barb): 122345626
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Entry
122345626 CDS
T08985
Symbol
spast
Name
(RefSeq) LOW QUALITY PROTEIN: spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122345626 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ptet04812
]
122345626 (spast)
Enzymes [BR:
ptet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
122345626 (spast)
Membrane trafficking [BR:
ptet04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
122345626 (spast)
Cytoskeleton proteins [BR:
ptet04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
122345626 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
TIP49
AAA_22
AAA_5
TniB
AAA_14
Mg_chelatase
AAA_16
IstB_IS21
MIT
DUF815
AAA_24
AAA_2
nSTAND3
Bac_DnaA
DUF5906
Motif
Other DBs
NCBI-GeneID:
122345626
NCBI-ProteinID:
XP_043095868
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All DBs
Position
1:complement(24883400..24891467)
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AA seq
570 aa
AA seq
DB search
MNPGARARQTGPARAGGRTCGQVSDRTGRSPLRSFVRNLRRFPVSLLRALLLLLLSLIRP
IRRTMAAKAKDRGSEGCEEIGELIRNYHKQAFEFISVALQIDEDEKGDKEQAVRWYRKGV
AELEKGICIQVTGAGEKADRARKLQDKMINNLSMAKDRLELLGKLLPKSPAEGSSDHTSL
SFSNGNLRPVAGGGAVSKKKDALTITNVRPKNPPKSAPASAPRRTPSTGHSGRTGPQSNL
KGPPARAGNRHNTSNTATASPQRKRDMKNFKNVDSKLANLILNEIVDSGAAVQFDDIAGQ
ELAKQALQEIVILPALRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAMESNATFFNIS
AASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEIDSLLCERREGEHDASRRLKTEFLI
EFDGVQSSGDDRVLVMGATNRPQELDEAVLRRFAKRIYVALPTEETRLKLLKNLLSKHRN
TLSQKELSQLARMTEGYSGSDLTSLAKDAALGPIRELRPEQVRNMPADKMRDICFNDFVD
SLKRIKRSVSPQTLDQYVRWNRQYGDTTAV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctggggccagagcgagacagacaggaccagcgcgcgcaggaggacgcacctgc
ggacaggtgtctgacagaaccggccggagtccgctgcgctcgttcgtccgaaacctccgc
cggttcccggtgtccctgctgagagctctcctcctgctcctcctgagtctgatccggccc
atccgccgaaccatggcggccaaggccaaagaccgagggtccgagggctgcgaggaaatc
ggagagctgatccgaaactaccacaaacaagccttcgagttcatttctgtggctctgcag
atcgacgaggatgagaaaggtgataaggagcaggcggtccggtggtacaggaaaggcgtc
gctgagctggagaaaggcatctgtatccaggtcactggagctggggagaaggcagacaga
gccagaaagcttcaggacaaaatgattaacaacctctccatggccaaagaccgactggag
cttctgggcaaactgcttccaaagtcgccagcagagggcagctctgatcacacaagcctg
tctttctccaacgggaacctgcgtccagttgcaggcggtggagcggtttccaagaagaag
gatgctctcacaatcacaaacgtgcgacccaaaaacccacccaaatccgcccctgcatct
gccccgcgccggacaccttcgaccggtcacagcggcaggaccggccctcagagcaacctg
aaggggcccccggcaagagccggtaacagacacaacaccagcaacaccgccactgcgtcg
cctcagaggaagagagacatgaagaactttaaaaacgtggacagcaaactggccaacctc
atcctcaatgagatcgtagacagcggggctgcggtgcagtttgatgacatagctgggcag
gaactggctaaacaagccctgcaggaaatcgttattctgcctgctctacgtccagagctg
tttactggtcttagggctcctgctagaggcctcctgctctttggcccacctggaaatggg
aagactatgctggcaaaagcggtggcgatggaatctaacgctacgtttttcaacatcagc
gctgccagtctcacctccaaatacgtgggagaaggtgagaagctggttcgggctttgttt
gcggttgctagggaactgcagccgtcaatcatcttcatagatgagattgacagtctgctg
tgtgagaggagagagggagagcatgacgccagcagaagactcaaaactgagttccttatt
gagtttgatggagtgcagtcaagtggagatgaccgagtgttggtgatgggagccactaac
aggcctcaggagcttgatgaggcagttctcaggcgattcgctaaacgcatttatgtggct
ttacctacagaggagactcgtctgaagctgctcaagaacctcctcagcaaacacagaaac
actttatctcagaaagagctgagtcagttagccaggatgacggagggttactccggcagt
gatctgacctcgctggctaaagatgctgctcttggtcctatacgagagctgaggcctgaa
caagtgaggaacatgccagccgataagatgagggacatctgtttcaatgatttcgtggat
tcgctcaagaggatcaagcggagcgtcagtcctcagactctggatcagtacgtgcgctgg
aacagacagtatggagacacaacagccgtatga
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