Puntigrus tetrazona (Sumatra barb): 122345757
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Entry
122345757 CDS
T08985
Symbol
tncb
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04510
Focal adhesion
ptet04512
ECM-receptor interaction
ptet04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122345757 (tncb)
04518 Integrin signaling
122345757 (tncb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122345757 (tncb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ptet00536
]
122345757 (tncb)
Glycosaminoglycan binding proteins [BR:
ptet00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122345757 (tncb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
fn3
EGF_Teneurin
Fibrinogen_C
EGF_Tenascin
EGF_2
DUF7949
Fn3_PBP1
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
EGF
Fn3_Dep-1_2nd
Pur_ac_phosph_N
NDNF
hEGF
EGF_PEAR1L
fn3_2
SPE9_EGF_3rd
Big_5
Motif
Other DBs
NCBI-GeneID:
122345757
NCBI-ProteinID:
XP_043096130
LinkDB
All DBs
Position
5:9072780..9104866
Genome browser
AA seq
1813 aa
AA seq
DB search
MGMRGLLLACVAVAMLVHLSSAGLVKRVIRHRRESLSPTTENLTLPSPDQPVVFNHVYNI
NVPSGSLCSVDLDSPGTTPVKPKPANLQSDQHIEHTTDGENQIVFTHRINIPKQACGCDN
HMPDLKDLLNRLEMLEAEVSSLREQCTSGTGCCSAQVSAGEVTTKPYCSGRGNYSTDTCS
CVCEPGWKGVNCSEPECPNFCQDQGRCEDGKCVCFEGFGGEDCSVELCPVDCGENGECID
GACICAEGFIGEDCSMTNCLNNCLGRGRCVDDECVCDEPWTGFDCSELICPNDCYDRGRC
DNGTCYCEEGFTGEDCGELTCPKNCNHRGRCVNGQCVCNIGYSGDDCSKLTCLNDCNQRG
HCFNGKCICDPGFEGEDCGILSCPDNCNDRGQCVNGECICDDGYEGDDCSELSCPNNCHD
RGRCVNGKCICKVGFAGEDCSIKTCPHDCHGRGECVDGKCVCHDGFAGEHCGIKTCPHHC
HGRGQCVDGKCVCHHGFAGEDCSIKTCPSHCHGHGQCVDGKCICHHGFTGDDCSIKTCPN
DCHGRGKCVDGKCICHDGFAGEDCSIKTCPNNCHDRGQCVDGKCVCHAGFTGHDCSELTC
PNDCHNRGLCVNGQCVCNIGFSGEDCSTKTCPNNCLDRGYCEDGKCVCSEGYTGEDCSVL
TCPANCNDQGQCLNGMCICDLGFTGDDCSEISPPRDLTVTEVDPETVDVAWVNEMLVTEY
LITYVPTAPGGLEMEMRVTGEKKMATIRELEPGIEYLISVFAVLNSKMSVPVSARIATHL
PEPEGLKFKSVRETSVEVEWDPLNIPFDGWNLIFRNTKEEDGEILNSLTPPETTFEQSGL
GPGQEYEVKLEVVKNNTRGPPASKNVVTMIDAPSQVDVRDVTDTTALITWLQPVAQVDGI
SLSYRPITNLDKTTIELSSIDTQYHLAELYPDTEYEVSLMARRGEMTSFPVDERFTTDLD
APKNLRAVEQTDESITLEWENSEANVFIYRVKYGPISGGEHGELVFPSGPKDTTQAKITG
LRPGTEYGMGVTSIKEERESLPATTNAVTDIDAPKDFEVSETTETTLALVWRRPVAKIDT
YTLAFTSEDGTEAEHEIPGAANTYILSDLSPGMLYTISLTAKRGRKMSAPATLSASTDEE
KPQVGNITISDVSWDSFSVSWELDRGEVEGFLVEVSDPDGLSDGQNHTLSSQEFSLAVSD
LSPSTFYRVTLYGLYKGELLDPVFAEAITETEPEVEHLMVSDITPHSFKLTWTAPEGVFD
TFTLKIVDSNGLGQPLQISVFGVERTEVVTGLKEDMEYEIELFGIIMGRKFQPILAVART
GLGTPKGIRFSDVTDTSATVHWTLPQTHVDSYRVTYVPIQGGSPMTLRVDGGESQAMLPN
LTPGVTYQVTVIAVKGLDESEPGSERVTTALDKPRGLTAVNITDTEALLLWQPSIATVDG
YVITYSADSVAPVMERVSGNTVEFEMSSLTPATLYTVKVYAVREAAKSAATTTEFTTDVD
APQNLAASNIQTESAMLTWKPPRADISGYILSFESADGIVKDVVLSPTATFYSMSQLTSS
TEYTVRLQAIAGPKRSRIISTVFTTIGVLYKHPKDCSQTLLNGEATSGLYTIYLRGDESQ
PLQVYCDMTTDGGGWIVFVRRQSGKVEFFRNWKNYTAGFGDLNDEFWLGLSNLHKITSSG
QYELRVDLSDKGESAYAQYDKFSVSEPRSRYKVHVGGYSGTAGDSMTYHHGRPFSTYDND
HDIAVTNCALSYKGAFWYKNCHRVNIMGRYGDNSHSKGVNWFHWKGHEHSIEFAEMKIRP
ANFRNFEGRRKRS
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atggggatgcgaggcctgcttctggcctgtgtggcagtagccatgttagttcatctctct
agtgctggcctggtgaaaagagtaattagacacagaagagaatcactgtcaccgaccact
gagaacttgaccctcccaagtcctgatcagcctgtggtttttaaccatgtatacaacatc
aacgttccctctggctccctgtgctctgtggacttggattcacctggaacaacaccagtg
aagccaaaaccggccaatcttcagtctgaccagcacatagaacacaccacggatggagag
aatcagattgtttttacgcataggattaacattcccaagcaagcttgcggttgtgataac
cacatgcctgacctgaaggatcttctgaacaggctggaaatgctggaggcggaggtatcc
agtctaagagagcagtgcaccagtggaacaggctgttgtagtgctcaggtgtcagcaggt
gaagtcacaaccaaaccctactgcagtggccgcggaaactacagcaccgacacctgcagc
tgtgtgtgcgagcccggttggaagggagtcaactgctctgagccagaatgccccaacttt
tgccaagatcaaggccgctgtgaagatggcaagtgcgtctgcttcgagggcttcggcggt
gaggactgcagcgtcgagctgtgcccagtggattgcggtgagaatggagagtgcatcgac
ggggcttgcatctgcgctgagggcttcatcggtgaggattgcagtatgaccaactgcctg
aacaactgcctgggcagggggcgctgtgtggatgacgaatgtgtgtgtgatgagccttgg
acaggctttgactgctccgagctcatctgtcccaatgactgctacgaccgtggccgctgt
gacaatggaacctgctattgtgaagagggctttactggggaggactgcggggagcttacc
tgccccaaaaactgcaatcaccgtggcaggtgcgtcaatggacagtgcgtctgcaacatt
ggctacagcggagatgactgctccaagctaacctgcctcaatgactgcaatcagagaggg
cactgcttcaatgggaagtgcatatgcgatcctgggtttgagggtgaggactgcggcatt
ctttcctgccctgacaactgcaatgataggggacagtgtgtcaatggtgagtgtatttgc
gatgatggatatgaaggtgatgactgctccgagctctcttgccccaataactgtcacgat
cggggccgatgcgtcaacgggaagtgcatttgcaaagtaggctttgctggagaagattgc
agcattaagacctgtccccatgactgccatggacgcggagagtgtgttgacggcaaatgc
gtttgccatgatggctttgctggagaacactgtggcatcaagacctgcccccatcattgc
catggacggggacagtgtgtggacggcaagtgtgtttgccaccatggctttgccggagaa
gattgcagcatcaagacctgtcccagtcactgccatggacatggacagtgtgtggatggc
aagtgcatttgccaccatggctttactggagacgattgcagcatcaaaacctgtcccaat
gactgtcatgggcgtggaaagtgcgtggacggcaagtgcatttgccatgatggttttgct
ggagaagactgcagcatcaaaacctgtcccaataattgtcatgaccgtggacagtgtgtg
gacggcaagtgcgtttgtcatgctggctttacaggccatgactgtagtgagttgacttgc
cccaatgactgccataaccgaggactttgtgtaaatggccaatgtgtgtgtaacatcggg
ttctctggggaggactgtagtacaaagacatgtcccaacaactgcctggaccgtggctac
tgtgaagatggaaagtgtgtctgctctgagggctacaccggtgaggactgctctgttttg
acctgcccagcaaactgcaatgaccaaggccaatgtctgaatggaatgtgcatatgtgat
ttaggcttcactggcgacgactgctctgaaatctccccacccagagacttgactgtgact
gaggtcgatccagaaacggtggacgttgcctgggtcaatgagatgcttgtgacggagtat
cttatcacttatgtgcctacggctcctggcggtttggagatggaaatgagagttactggt
gaaaagaagatggccactattagggagcttgagcctggcatagagtacctaataagtgtc
tttgctgtcctgaacagcaagatgagtgtccctgtcagtgccagaatagccacacatctt
cctgaacccgagggcctgaaattcaaatcggttagagagacctcagtggaggttgagtgg
gaccccttgaacatcccgtttgatggctggaacctcatcttcagaaacacaaaagaagag
gatggagagattttgaactctctcacccctcctgagaccacctttgagcagtctggtctt
ggacctggacaagaatatgaagtcaagcttgaggttgtaaagaacaacacccgcggaccc
ccagccagcaagaacgttgtcacaatgattgatgctcccagccaagtggatgtgcgtgat
gtgacagacaccacagcccttatcacctggcttcagcctgtcgctcaggtggacgggatc
tctctgtcctatcgccctatcacaaatttagacaaaacaacaatagagctttcctccata
gatacccagtatcatctggctgagctgtaccctgacacagagtatgaggtctctctcatg
gctcgcaggggagagatgaccagctttccggtcgatgagcgcttcaccacagaccttgat
gcccccaaaaacctcagggcggttgaacagacagatgagagcataactctggagtgggaa
aacagcgaggccaatgtcttcatttaccgcgtcaaatacggcccaatttctggaggggag
catggagagctggtcttccccagcggccctaaggataccactcaggctaaaatcactggc
cttaggcccgggacggagtatggaatgggcgtgacgtcaatcaaggaagagcgtgagagt
ttgcctgcaacgactaatgctgtgactgatattgatgctcccaaagactttgaagtaagt
gagaccacagagaccacattggcactggtttggaggagaccggtcgccaaaatcgacacc
tatacgctagcgtttacatctgaggatggaactgaagctgaacacgagatacctggtgct
gccaatacctacatcctcagtgacctgtcccccggcatgctgtacaccatcagcctgact
gccaagagaggaagaaagatgagcgcaccagccactctgtcagcatccacagatgaagag
aagcctcaggtgggcaacatcaccatctctgatgtgtcctgggacagcttcagtgtgtcc
tgggagctggacagaggagaggttgagggctttctggttgaagtatctgacccagatggt
ttatctgatggccagaaccatactctatccagccaggagttcagcctggctgtctctgac
ctctcccctagtactttctacagggtcacactgtatgggctgtacaagggagagctctta
gatcctgtctttgctgaagccatcacagaaactgaacctgaagtggagcatcttatggtc
tcggacatcaccccgcacagctttaaactgacatggacggcaccagaaggcgtctttgat
acattcactctcaaaatcgtcgattctaatggcctgggccaacctctccagatcagtgtt
tttggagtcgagcgaacagaagtggtgacaggtctcaaagaagatatggagtatgaaatc
gagctctttgggatcattatgggaaggaaattccagcccattttggctgtagctcgaaca
ggtttgggaacacccaaggggatacgcttttctgatgtgacggatacatcggctactgtt
cactggactttgcctcaaacccatgtagacagctaccgggtcacctatgtgcccattcag
ggtggcagccctatgacactgagagtagatggaggagaatcccaagccatgctgcctaat
ctgacccctggagtgacctaccaggtcactgtcatcgctgtgaagggcttggacgagagc
gaaccaggatctgagagagtcacgacagccctggataagccgagaggtctgacagcagtc
aacatcactgacactgaagctctgctgctgtggcagccgtccattgctactgtggatgga
tatgtcatcacttacagcgcagacagtgtggctccagtgatggaacgggtgtctgggaac
actgtggagtttgagatgagctccctcacacctgccaccttatacactgttaaagtctat
gctgtcagagaggcagccaagagcgccgcaaccaccacagagttcaccacagatgttgat
gcccctcagaatctggctgccagtaatattcaaacagagagcgccatgttgacatggaaa
ccaccaagagcagacatcagtgggtatatcctcagctttgagtctgctgatggcatcgtg
aaggatgttgtccttagccccacggcaacattttacagcatgtctcagctgacttcctcc
acagaatacacagtcagactgcaggccatcgctgggccgaagagaagcagaatcatctcc
acagtcttcaccaccattggagtgctatacaagcatcctaaagactgctcgcagactctg
ttaaacggagaagcaacctcgggcctgtacactatttaccttcgtggagatgagagtcag
cctctgcaggtctactgtgatatgaccactgatggaggaggctggattgtgtttgtgaga
cggcagagcggtaaagtggagtttttcagaaactggaagaactacactgcaggcttcggt
gacctgaatgatgaattctggttgggtctctctaacctccataagatcacctcctctggg
cagtatgagttgcgtgtggacctcagtgataagggagagtctgcatatgcgcagtatgac
aagttttcagtctcagaaccacgcagtcgctacaaagtacatgttggcggatacagcggc
actgcaggtgactcaatgacgtatcaccacggccgtccattctcgacctacgataatgac
cacgatatagccgtcaccaactgtgctctgtcttacaagggagctttctggtataaaaac
tgtcatcgagtgaatataatgggacgatacggcgataacagtcatagcaagggtgtaaac
tggttccactggaagggtcacgagcactccattgagtttgcagagatgaagatcaggcct
gctaacttcaggaatttcgagggaaggagaaagcgatcgtaa
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integrated database retrieval system
