Puntigrus tetrazona (Sumatra barb): 122345787
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Entry
122345787 CDS
T08985
Symbol
pdlim5a
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ and LIM domain protein 5a
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122345787 (pdlim5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ptet04990
]
122345787 (pdlim5a)
Domain-containing proteins not elsewhere classified [BR:
ptet04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
122345787 (pdlim5a)
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
122345787
NCBI-ProteinID:
XP_043096178
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Position
5:complement(32684513..32719171)
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AA seq
555 aa
AA seq
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MSGKYSVVLQGPAPWGFRLQGGKDFNMPLSISRLSDGGKAAKAGVAVGDLVLSIDGIGTD
GMNHLEAQNKIKSSTDKLSLSLQKASSLPKPDVAPKDYSVEIIKPVPMTTSIPSSSDITN
STHITSSSNRSARPFGGVGSPHIASIPSAASAFAPASSAQNPNTQAPPTPTDHLPAVPRP
SVYNTPINLYSNENACEVAMGQRRGLLESQGESAQLNGKPAANRIPRKPITETDIEFYHV
PTHGDASRKRIMEDTEDWXPRTGTSQSRSFRILAQITGTESEFDRSQEAESAKKTTNEEL
DESQPSTHVTCPVKTMMKAPGTPVRSTAGLITPTFGVVSSTTPLGPALDRPTPXPHPKDE
ASLVQMAEHIPAGTRTPVCAHCDTIIRGPFLMAMGKSWHPEEFTCAHCSVSLSELGFVEE
QGSVYCQHCYEEFFAPTCARCQYKILGEVISALKQTWHVYCFLCASCQQPIRNDTFHLED
GEPYCERDYYGLFGTGCRGCDFPIEAGDKFLEALGGTWHDTCFVCSVCSVSLEGQTFFSK
KDKPLCKKHAHALKI
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtaaatacagtgtggtgttacagggtccggccccgtggggcttcagactgcag
ggggggaaagacttcaacatgcctctctccatttcacggctgtcggacggagggaaggct
gctaaagcgggagtggctgtgggagatctggtcctgtccatcgacggcatcggcactgac
ggcatgaaccacctcgaggctcagaacaagatcaaatccagcacagacaaactcagcctc
tctttacagaaagcttccagtcttccaaaaccagatgtggcaccgaaggattattctgtg
gaaatcatcaaacctgttcccatgacaacctccattccatcttcttctgacatcacaaac
tccacccacatcacttcatcttccaataggagcgctcgtccgtttggaggggtggggtca
ccgcacatagcctccattccgtccgccgcgtctgcttttgcacccgcctcctcagctcaa
aaccctaatacacaagctccgcccactcctactgatcatctaccggcggtgccccgccct
tcagtgtataacacgcccatcaatctctactccaatgagaatgcctgtgaggttgccatg
ggccagaggcggggcctgctggaaagccagggcgaaagcgctcagctgaatggaaaaccc
gcagcgaacagaattcctcgtaaacccatcacagaaacggacattgagttttatcatgtc
ccgactcacggtgacgccagcaggaaacgcatcatggaggacacagaggactggncgccg
cggacaggaacttcacaatcccgctcgttccgtatcctggcccaaatcaccggcactgaa
tctgaattcgatcgctcacaggaggccgagtcggcaaagaagaccacaaatgaggagctg
gatgaatctcagcccagcacccatgtcacctgtcccgtgaagaccatgatgaaagccccg
ggaacacccgtcagaagcacagcaggtctcatcactcccacttttggcgtcgtgagcagc
actactcctttaggccccgccttggatcgtcccacgcccngcccgcaccccaaagacgaa
gcctcattggtccagatggcagaacacatccctgctggaacacgcactcctgtgtgcgct
cactgcgacacgatcatcagggggccgttcctgatggcgatggggaaatcgtggcacccg
gaggagttcacgtgcgctcactgcagtgtttctctgagcgagctggggtttgtggaggaa
cagggctctgtttactgccagcactgctacgaggagttcttcgccccgacctgtgctcgc
tgccagtacaaaatcctgggggaagtgatcagcgcgctcaagcaaacctggcatgtgtat
tgtttcctgtgtgcttcctgccagcaaccgataagaaacgatacttttcatcttgaggat
ggagagccgtactgcgagagagattactacggtctgttcgggacgggctgccgcggttgt
gatttcccgatagaagcaggagacaagttcctggaggccctgggcggcacctggcacgac
acctgcttcgtgtgctcggtgtgcagcgtcagtctggagggacagaccttcttctccaaa
aaagacaaaccgctttgcaagaaacacgctcacgctctcaaaatataa
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