Puntigrus tetrazona (Sumatra barb): 122345812
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Entry
122345812 CDS
T08985
Symbol
tmc1
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptet02000
]
122345812 (tmc1)
03037 Cilium and associated proteins [BR:
ptet03037
]
122345812 (tmc1)
Transporters [BR:
ptet02000
]
Other transporters
Pores ion channels [TC:
1
]
122345812 (tmc1)
Cilium and associated proteins [BR:
ptet03037
]
Other cilia and associated proteins
Stereociliary proteins
122345812 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
COX16
Motif
Other DBs
NCBI-GeneID:
122345812
NCBI-ProteinID:
XP_043096227
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All DBs
Position
5:10297132..10306693
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AA seq
999 aa
AA seq
DB search
MLVKSELFMQGTHQRQVLFSQGMVHCYNIITHTHTLICMDTHTQGQPHAEXRPLGRRMPR
HKLIASESDVSIEVDEGKDNEFSLYYVEMEENSKGGKEKQTTRDGKRRREKNGEVSRRRA
SEKRTEMGNKRAEKKPEKHHKTARKEGEKHRKRQRRRNADEEEAEEESSKEKKNIKNERT
KTLKPEDEKEKDVKKKRKKHVKNDEDDANPRKTKPKDCRDVTLKEKEKKKKTKKPETTSE
SESQSEPNSDSESKDNQAVGVLGSLSPEELEKLKEAVDERKKLITTLKGKPWPMKKKLIV
LRESQEFVEKYEGALGKGKGRKLYAYKVMMMKKWTKFQRDLENFKTACIPWEMKIKEIES
HFGSSVASYFIFLRWMYGINMILFGLTFGLVMVPEALMGKPYGSMPRKTVPREEEASAMN
FAVLWDFGGYAKYSVLFYGYYNNQRAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMARN
ANEEGGGDDTSFNFSWKTFTSWDYLIGNPETADNKFASITTSFKEAIVEEQESRKDDNIH
LTRFLRVLANFLVLCCLAGSGYLIYFVVRRSQKFALEGLENHSWWERNEVNMVMSLLGMF
CPMLFDVISTLENYHPRIALQWQLGRIFALFLGNLYTFIIALMDAIQLKRAEEEIVKKNM
TIWQANLYNGTVPDNSTAPPITVHPADVPRGPCWETMVGQEFVRLIISDTMTTYITLLIG
DFLRAVLVRFLNNCWCWDLEYGFPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNL
LRLHVSMYLQCWAVMCCNVPQERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVSIPPSF
DCGPFSGKNRMFDVIQETLETDFPAWFSKVFSYASNPGLVLPFLLLLVLAIYYLQSTSKT
YKRVNMELKKKLQTQNEENKKKNKLAALKAANELEQARKAGEQHSNSASDLGENAQNSEP
PVSSTHATTRPPASRSHAASGHLPGHPQQPQKNSYSNRR
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgctagtaaaaagtgaactcttcatgcagggtactcatcagcgccaggttctgttcagc
cagggcatggtccactgctacaacatcatcacacacacacacacactcatatgcatggac
acacacacgcaaggtcaaccacatgcagagtgaaggccactcgggaggaggatgccacgg
cataaactcatcgcatcagaaagtgacgtgagcattgaggtggatgaagggaaggataat
gaattcagcctttactatgtggaaatggaggaaaactcaaaaggaggtaaggagaagcag
acgacgcgagatggcaaacggagaagagagaaaaatggtgaagttagcaggagaagagct
tcagagaagagaactgagatgggtaataaaagagcagaaaagaaacctgagaaacaccac
aaaacagcaaggaaagagggtgagaaacacagaaaaaggcaaagaagaaggaatgctgat
gaagaggaggcagaggaagaatccagcaaagagaaaaagaacattaaaaatgaaaggacc
aagacgctaaaaccggaagatgagaaggaaaaagatgtgaagaaaaagagaaagaagcat
gttaaaaatgatgaggacgatgcaaatcctcgaaagacaaaaccgaaagattgtcgagac
gttaccttgaaggaaaaggaaaagaaaaagaaaacaaagaagccagagactacctcagaa
tctgagtcacaatctgaaccgaactctgactccgagtcgaaagacaatcaggcggtggga
gttttggggtctctgtccccagaggagctggaaaagttaaaagaagcagtggacgaaagg
aaaaagctgataaccacactaaaaggaaaaccctggcccatgaagaaaaaactaattgtc
cttagagagtcgcaggagtttgtggagaaatatgaaggggctttggggaaaggcaaaggc
aggaagctgtacgcctacaaggtcatgatgatgaagaaatggacgaagtttcaacgtgat
cttgagaacttcaagactgcctgcatcccgtgggagatgaagataaaggaaatagaaagt
cattttggttcgtcagttgcctcttactttatatttctgaggtggatgtatggcatcaat
atgattttatttggactaacgtttgggttagtaatggttccagaggctcttatgggaaaa
ccatatggtagtatgcccaggaagacagttcccagagaggaagaggccagtgctatgaat
tttgcagtcttgtgggattttgggggctatgcaaagtactctgttctcttctatggctac
tacaataaccagcgggccattggttggctcaaatttcgcatgcccctgtcctacttcctg
gtgggtgtgggtacagtggcgtacagctacatggtggtaatcaggaccatggcccgaaat
gccaatgaagaaggtggcggagatgacaccagttttaatttcagttggaagacattcact
agttgggattacctcattggaaatcctgagacggcagacaacaagtttgcgtccatcacc
actagtttcaaggaggccattgtggaggagcaagagagcagaaaagatgacaacatccac
ctgacaagattccttagagtgctggccaacttcctggtgctctgctgtctggcggggagt
gggtacttgatctactttgtagtacgcaggtctcagaagtttgctctggagggactggag
aaccacagctggtgggagaggaatgaggtgaacatggtgatgtctctgttgggaatgttc
tgtccgatgctgttcgatgtgatcagcactttagagaactatcatccacgcatcgccctc
cagtggcagctgggacggatatttgcccttttcctggggaacctctacacgttcatcatc
gctctcatggatgccatccagctaaagagggcagaagaggagattgtgaagaaaaatatg
acaatctggcaggctaacctgtacaacgggactgtgcctgataactcaactgctcctccg
atcacagtgcaccctgctgatgttcccagagggccttgctgggagacaatggttggacag
gagtttgttcgcctcatcatttctgatacaatgactacttacatcactcttcttattggg
gatttcctccgagccgtattggtgcgattcctaaacaactgctggtgctgggatctggag
tatggctttccgtcctattcagagtttgacgtcagtgggaatgttctgggactgatcttc
aatcagggaatgatctggatgggggcattctacgctccatgtcttccggcattgaatctt
ctccggcttcatgtgtccatgtacctgcagtgttgggcggtgatgtgttgtaatgtgcct
caggaacgggtctttaaagcttcgggctccaataacttctacatggccatgctgctagtc
atcctcttcctctctacgctgccagccatatacaccattgtctccatacctccctccttt
gactgtggacctttcagtgggaaaaaccgcatgtttgacgtgattcaggagaccctggag
acagactttcctgcctggttcagtaaagtattcagttacgcctcgaacccagggctggtg
ctgccctttcttctgctcctggttcttgcgatatattatctgcagtccacttctaaaaca
tacaaaagggtaaacatggagctgaaaaagaagcttcaaactcaaaatgaagaaaacaag
aaaaagaacaaactcgcagccttaaaagcagccaatgaactggagcaggcgaggaaagca
ggagaacaacacagcaacagcgcctccgatttgggtgagaatgctcaaaactctgaacct
cccgtctcatcgacccacgcaactaccagaccccctgcatctcggagccacgcagcatct
ggacatcttccaggtcacccacagcagccacagaaaaactcttactccaacaggagataa
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