Puntigrus tetrazona (Sumatra barb): 122345937
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Entry
122345937 CDS
T08985
Name
(RefSeq) RNA-binding protein Musashi homolog 1
KO
K14411
RNA-binding protein Musashi
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122345937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122345937
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122345937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
NID
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
122345937
NCBI-ProteinID:
XP_043096411
LinkDB
All DBs
Position
5:complement(32315687..32342744)
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AA seq
350 aa
AA seq
DB search
MDTEGSQSSLSSSTQDSPHDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTK
RSRGFGFVTYVDQTGVDKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSV
NTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKM
VECKKAQPKEVMSPTGTARGRSRVMPYGMDAFMLGIGMLGYPGFQAATYASRGYTGITPG
YTYQFPEFHLERTPLLTSSHPPEITAIPLTAYGPMAAAAAAAVVRGSTPSRTAGFLGTSS
PGPMADLYAAANQDSGVSSYISAASPAPSTGFGHGLGGPLIATAFTNGYH
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggacacagaagggagtcagagcagcctgtcgtcctccacgcaggactccccacacgac
ccctgcaaaatgttcatcggcgggttgagctggcagacgacacaagaggggctgaaggaa
tacttttgtaaattcggcgaggtgaaggagtgtatggtgatgcgggatccggttacgaag
cggtcgagggggttcggatttgtcacctacgtagaccagaccggtgtggataaagttttg
gcccaaaacagacacgagctggattcaaaaacaattgaccctaaggtggcctttccgcgt
agagctcagccgaagctggttacgagaacaaagaagatctttgtcggaggactgtctgtc
aacaccaccatcgaagatgtgaaacagtatttcgatcagtttggaaaggttgatgacgcg
atgctaatgtttgacaaaaccaccaacaggcaccgaggtttcggctttgtgacctttgag
aatgaagacgtggtggaaaaggtctgcgagatccactttcacgagatcaacaacaagatg
gtggagtgcaaaaaggcacagccgaaggaagtgatgtcaccgacaggtacggcgcgaggc
cgctccagagtgatgccctacggcatggacgccttcatgctgggtatcggcatgctgggt
tacccagggttccaggcggccacttacgccagtcgtggatacacaggaatcacaccagga
tacacgtaccagttcccagaattccatttagaacggacacccctcctgacttcctctcac
cccccagagatcacagccattccactgacggcctacggaccaatggcagcggcggcggct
gcagcggtggtcagaggttccaccccatcacgtaccgctggcttcctgggcaccagcagc
cctgggccaatggcagacctgtatgcagcagccaatcaggattcaggagtcagcagctat
atcagtgcggcaagtcccgcccccagcacagggttcggacatggactcgggggtcctttg
atcgcaacggccttcaccaatggctaccactga
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