Puntigrus tetrazona (Sumatra barb): 122346013
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Entry
122346013 CDS
T08985
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122346013 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptet03021
]
122346013 (taf6)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122346013 (taf6)
Transcription machinery [BR:
ptet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122346013 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
122346013 (taf6)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
122346013 (taf6)
STAGA complex
122346013 (taf6)
TFTC complex
122346013 (taf6)
SAGA complex
122346013 (taf6)
SLIK complex
122346013 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CENP-S
Motif
Other DBs
NCBI-GeneID:
122346013
NCBI-ProteinID:
XP_043096570
LinkDB
All DBs
Position
5:complement(24759478..24782648)
Genome browser
AA seq
636 aa
AA seq
DB search
MAEERRQKLCSVILPTESMKAMAESVGVGSLQEDSCLALSEEVSYRIKEITQDALKFMHH
GKRRKLTTGDIDHALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIDGVQPAIPENPPPVPKEQQKTDSTEPLKAVKPGQEEEGSIQA
KGQSASSAEVKGKEKMRMKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDP
GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVVT
CIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKALLDDKTQW
TTRYGCIAGLAELGHDVIKTLIIPRLSVEGARIKAVMDGPVVSNIDKIGADHVQSLLLKH
CASVVAKTRPLPDVVDQYKADYGYLGTMLCSHVVKARAQAAFQAQTVNRTTLTITQPRPT
LSVSQSGLSASSGSRTPSIIKVPGSLSLISTRPGTPTQPSPPATKYIVMATSAGAASTQQ
VITLSSSQSGSPVTSTVPSTPTSLQPLVKMESGNTGAVSGSRPLQKYIVVSLPSSSSSLE
NKGSGVLPSSTSPISMESAVKLERSESPAANTQSPH
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggagcgcagacagaagctgtgttcggtgatcttgcccacagaatccatgaag
gcgatggcggagtcagtgggagtgggctccctgcaggaagacagctgtctggccctcagt
gaagaggtcagctacaggatcaaagagatcacccaggacgcactgaagtttatgcaccac
ggtaaaagacgcaaacttactacaggcgacattgaccacgctcttaaactgaaaaacgtg
gagcctctgtatggatttcagtctcaagagtttatcccatttcgctttgcaagtggaggc
ggcagagaattgcacttctatgaagaaaaggaagtggatcttagtgatatcatcaacaca
cccctccctagagtccctcttgatgtttcgctcaaagctcactggttaagtatcgatggt
gtccagcctgcgataccagagaacccacctccagttcctaaagagcagcaaaagacagat
tccacagagccactcaaagctgtcaaacctggacaggaagaggaaggctctatccaggcc
aagggtcagagtgcaagctctgctgaagtcaaaggaaaagagaagatgcggatgaaacca
cgtagcacacatgagctctctgtagagcagcagctctactataaagaaatcacagaagct
tgtgtgggatcctgtgaagccaaaagagcggaagcactgcagagcatagcaacagaccca
gggctataccagatgctgccaagattcagtaccttcatctctgagggtgtccgcgtaaat
gtcgttcagaataacctggctctgctgatatacttaatgaggatggtgaaggctttaatg
gacaatccaactctatatttagagaaatatctgcatgagttgattccagctgtagtgacg
tgtattgtgagtaagcagctatgtctgagacctgatgtggacaatcactgggctctgcga
gactttgctgcccggctgatggctcagagctgcaagacttttagcacaacaaccaacaac
atccagtcacgcatcaccaagacctttactaaggcattgttggatgataaaactcagtgg
acaactcgttatggctgcattgctgggcttgcagagcttgggcatgatgtgataaagaca
ttgatcatcccccggctatctgttgaaggtgctcgtattaaagctgtgatggatggacca
gtggtgtccaacattgataagattggagctgatcatgtccagagtctattactgaaacac
tgcgcaagtgtggttgctaaaactagaccactcccagatgtagtggatcagtacaaggca
gattatggttatcttggcaccatgctttgttcacatgtggtaaaggcccgtgcacaggct
gctttccaggcccaaactgttaacagaaccacacttactatcacacagcctcgcccaacc
ctgtcagtgtctcagagtggattatcagcatcaagtggttcacgcacacccagcattatt
aaagttcctggttcactaagcctcatttccactcgccctggaacacccacccagccttca
cccccagcaaccaaatatatagtcatggcaacaagtgcaggagctgcatccactcagcag
gtaatcactctcagctcctcccagtctggctctcctgtcacaagtacagtgcccagcacc
cccacttctttacagccactcgtcaaaatggagtccggaaacacgggtgctgtgagcggc
tcgcgccctcttcagaaatacattgtggtgtctttaccatcatcgtcttcctcactggag
aacaagggctctggtgtcctcccgtcctctacctcaccaatcagcatggagtcagctgtc
aagctggaacgctcggaatcaccggctgcgaacacgcagtcgccacattga
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