Puntigrus tetrazona (Sumatra barb): 122346023
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Entry
122346023 CDS
T08985
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03030
DNA replication
ptet03410
Base excision repair
ptet03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122346023 (pole)
03410 Base excision repair
122346023 (pole)
03420 Nucleotide excision repair
122346023 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptet03032
]
122346023 (pole)
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122346023 (pole)
Enzymes [BR:
ptet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122346023 (pole)
DNA replication proteins [BR:
ptet03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
122346023 (pole)
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
122346023 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
122346023
NCBI-ProteinID:
XP_043096587
LinkDB
All DBs
Position
5:1579923..1597728
Genome browser
AA seq
2286 aa
AA seq
DB search
MVLQNSGRYKSDRGGGDQDNQQDDASALSAVKRLERSQFTDGMDERFGFERMKEPGEKTG
WLINMHPAEILDDDKRMISAVDYYFIQEDGNRFKIALPYKPYFYIATKKNCEREVISFLS
KKFQGKVAKLEVVPKEDLDLPNHLVGLKRNYIKLSFNTVDDLVKVKREISPAVRKNRERE
KSNDAYTSMLSSALVGGSVVTEDEEGTSKKMTEQLDNIVDMREYDVPYHIRVSIDLKIHV
AHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGFLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEPDEASLIQRWFEHVHETKPNIFV
TYNGDFFDWPFVEARAAQLGLSMHREIGFQKDNQGEYKASQAIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEEMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHVNIVFPNKQEQVFNKLTDDGHVLDTETYV
GGHVEALESGVFRSDIPCRFKMNPAAFDFLIQRVERTLRHAIEEEEKIPLEQVTNFNEVC
DEIKRKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ANCQRRMTWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGPPRAFHELNREEQARHEK
KRLGDYCRKAYKKVHLTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
TAQDNGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVIKSTNEKKAKVTISYPGAMLNIM
VKEGFTNHQYQELVDPASLTYETRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSK
AANMPDAELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVI
SRKPEGSPVTERAIPLAIFQAEESVKKHFLRKWLKMPSLHDLDIRSILDWGYYIERLGSA
IQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAQQSL
PAGVTPDMEDFGVPQRPVQPAILISTKRKRISQGEDSQAESQEQELTQSWREILGSPPAI
GSSREELLVWLRYHKKKWELQLRQRKERRKRRRLIDGGSQPTGGGVIRGGPTTGLGSFLR
RTARSILDMPWQIVQIAETSHPGFYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGAN
CKKVNRILPRSGVVYYLYQYAVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALVQ
LGCMCMVNKQVVRDLAGREADTFDLEHLEMRSLAQFSYLEPGSVRHIYLYHHSQGHKALF
GLFIPSQRKASIFVLDTVRSNQMPNLTSLYGAERTALLEKTTEELLPPEKHLFEVRAEND
VKAIYRALQRILLNYKEERRGPTLIAVQSNWELRRLAAGMTVLEEFPVVPVHVIDEISYN
VLDWQRHGARRMIKHYLNLDSCLSQAFDMARYYHLPVGNLPQDISIFGSDLFLARHLRKH
NHLLWLSPTARPDLGGKEADDSRLVMESDERGSMEINSHGCYSTVCVELDIQSLAVNTIL
QSQHVNDMEGGASIGVSFDVIQHASLEEMMSGNQGANTVASYDETALCSNTFRILKSMVV
GWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLNMMKKIFLQLVAEFKRLG
SSVIYGNFNRLILCTKKRRIDDAIAYVEYITNSIHSKEIFHSLSITFSRCWEFLLWMDPA
NYGGVKGKLPSSLLYGEHGNEKKKNKDGEEEDGSEDEDEDEENQGEDEERDGEDDVEDLI
ESNWNIMQYLPQTSSCQKYFLMIISAYIAAVYHSMKQELRRNAPGATPIKRRGATQASQQ
PTGDVSALPGLITFSQEYVSSELTQNFFTITQKIQKKVSSTRSVTLPSEMFPVLPGSHLP
LNNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEDAQFRDPCKSYILPEV
ICHHCNFCRDLDLCKDPAVSQDGSVLPQWFCSNCQAQYDTESIEMALVEALQKKLMSYTL
QDLECSKCKGVKEANMPMYCSCAGDFNLTFTTKSFTEQVEVFRNIAAHYNMNFLLETIDW
VLSMNA
NT seq
6861 nt
NT seq
+upstream
nt +downstream
nt
atggttttacaaaacagtgggcgatataaatcagaccgaggtggtggagatcaggacaac
cagcaggatgatgcatcagctttgtccgctgtcaagcggctggagcgcagccagttcacg
gatgggatggatgagcgcttcggcttcgaacggatgaaggaacctggggagaaaacagga
tggctgatcaacatgcacccggctgagattctggatgatgacaagcggatgatcagtgct
gtggactattacttcatacaggaggatggaaacagattcaagatcgctcttccctataag
ccgtatttctacatagccactaaaaagaactgtgaaagagaggttatctccttcctgtca
aaaaagttccagggaaaagtggcaaagcttgaagttgtcccaaaggaagacttagatctg
cctaatcacctggtgggcctgaagaggaattacatcaaactctcttttaacacggtggac
gacctggttaaagtgaaaagagagatctcgcctgctgtccgcaagaacagagagagagag
aagtccaatgatgcctataccagcatgttgtccagtgctttggttggcgggagcgtagtg
acggaggatgaggaaggcacttcgaagaaaatgactgagcagcttgacaatatcgtagac
atgcgggaatatgacgtgccttatcatatccgcgtttctattgacctgaagattcatgtg
gctcactggtacaatgtgcggtacagaggaagtgcctatcctcctgagattgtgcgcagg
gatgatcttgtggaaagacctgatcctgtagtgttggcgtttgatattgagaccactaaa
cttccactgaagtttcccgatgctgaaacagaccagattatgatgatatcatacatgata
gatgggcagggcttcctcatcacaaacagagaaatagtctctgaggacattgaagacttt
gagttcaccccaaaacccgaatatgagggccccttcactgtatttaatgagcctgatgag
gcctctctcattcagagatggtttgaacacgtccatgagaccaagccgaacatttttgtc
acttacaacggagatttctttgactggccatttgtagaagccagagcggcccagcttggc
ctgagtatgcatcgggagatcggctttcagaaggacaatcagggggaatataaagccagt
caggctattcacatggactgcctcaggtgggtaaagagagacagttacctgcctgtagga
agtcataacctcaaagctgcagcgaaggctaagttaggctatgaccctgtagagctggac
ccagaggaaatgtgccgtatggctactgaacaaccacagactctggccacctattcagtg
tctgatgctgtggccacatactacctttacatgaaatatgttcatcccttcatttttgcc
ctctgcactataattcctatggaacctgatgaggttttgcggaaaggctccggtaccctg
tgtgaggccttgctgatggttcaggccttccatgtcaacattgtcttcccaaacaagcag
gagcaggtctttaacaaactcacagatgatggccatgtacttgacacagagacttatgtt
ggcggccacgtcgaggctctagagtctggtgtttttcgcagtgatattccctgccgcttt
aaaatgaatccagcagcatttgacttcttaattcagagggtggagcgtactcttcgtcat
gcaattgaggaagaggagaagattccccttgagcaggtcaccaactttaatgaggtgtgt
gatgaaatcaagaggaaactgatctctctgaaggaagtgcctaatagaattgagtgtcct
cttatttaccatctcgatgtgggggccatgtaccccaacatcatcctcaccaacagacta
cagccctctgccatggtggatgaggcgacctgtgccgcctgtgattttaataaacctggt
gcaaactgtcagcgcagaatgacttggcagtggagaggagagattatgcctgccagtaga
agtgagtttcatcgcattcagcaacagctggagtctgagaagtttcctcctctttttcct
aatggaccacctcgtgcttttcatgagctcaacagagaagaacaagcacggcatgaaaag
aagcggttgggagactactgtcgaaaagcctataagaaggttcatctgaccagactggag
gagagagttactaccatttgccagagagaaaactctttttatgttgacacggttcgagcc
ttcagagaccgccgatatgaatttaaaggactccacaaggtgtggaagaagaagctgtct
acagcgcaagataatggggacgcagcggaggtgaagcgctgcaaaaacatggagatcctt
tatgagtctcttcaactggctcacaagtgcatccttaactccttctacggatatgtcatg
agaaaaggagcacgatggtactcgatggagatggcggggattgtctgtttcactggtgcc
aacattatcacacaggccagagagctcattgagcagattgggaggcctcttgagttggac
actgatggtatctggtgtgttcttcccaacacctttcctgagaactttgtcataaaatcc
accaatgagaagaaggcaaaggtgaccatcagttatccaggagctatgcttaatatcatg
gtcaaggagggtttcacaaatcatcagtatcaagagctggtggacccagcatctttaaca
tatgagaccagagctgagaacagtatcttctttgaagttgatgggccatacttggctatg
atcctgcctgcctctaaagaagaaggaaaaaagctaaagaagaggtatgctgtgtttaac
gaggacgggtcgctggctgagctgaagggctttgaggtgaagagaagaggagaacttcaa
cttattaagatcttccagtcctctgtgtttgaagccttcctgaaaggcacaactcttgaa
gaggtttatgcctctgtggcgaaagtggctgactactggcttgatgtgctctacagcaag
gctgctaacatgccagatgcagagttatttgagctgatttcagaaaaccgttccatgtcc
cgtaaactggaagattatggagagcagaagtccacttccatcagcacagcaaagcgtctt
gcagagttccttggtgatcagatggtgaaggacgctggcctgagttgtcgctatgtcatc
tcccgcaaaccggagggctcaccagtcactgaaagggcaatccctctggccatctttcaa
gctgaagagagtgttaaaaagcatttcctacgcaaatggctgaagatgcccagtctccat
gaccttgatattagatctattctggactggggttactacattgagcgcttgggcagtgct
atacagaagatcatcactatccctgcagcattacaacaggtgaaaaatcctgtaccccga
gtacgacatccagactggctgcataagaagcttctggaaaagaatgacatctacaagcag
aagaagatcagtgagctctttaccagtgagggaaagagacaggtggcccagcagtcgtta
ccagcaggtgtgactcccgatatggaagacttcggtgttcctcagcgccctgtgcagccc
gccatactcatcagtacaaagaggaagaggatatctcaaggagaggacagccaggctgag
tctcaagagcaagaactcacacagtcttggagagaaatactggggtctccaccagccatt
ggctcctctcgtgaggaacttcttgtctggttgcgctaccataagaaaaaatgggagctg
cagcttcgtcagaggaaagaacggcggaagcggcggcgtttgattgatgggggatctcag
ccgactggcggtggcgtaatccgtggtggaccgaccacagggctgggcagttttctgcga
agaactgcccgcagtatactagacatgccctggcaaattgtacagattgcagaaaccagt
cacccaggcttttataagctgtgggcggtcattggcaacgacctgcactgcatgaagctc
aacatcccacgagtgttttatgtcaatcagaaagtacccaagcaagaagaaggtgctaat
tgcaaaaaggtgaaccggatacttccacgctctggtgtggtgtattatctgtaccagtat
gctgttcctgaggacatgtaccaggaacacatcaatgagatcaatgctgacctctcagct
cctgatattgagggtgtctatgagacacaggttcctctgctgttccgggctctggtccag
ttgggctgcatgtgtatggtcaataagcaggtggtcagagacctggctggcagagaggct
gatacctttgacctggagcatctagagatgagatccctggcccagttcagctacctcgag
ccaggcagtgtaaggcacatctacctataccatcacagtcagggccataaggctctcttt
ggcctcttcataccctctcaacgcaaagccagcatctttgttctcgacacggtacgcagt
aatcagatgccaaacctaacttcgttgtacggagcagagcgcacagcactcctcgagaag
accactgaggagctgctgccacctgagaagcatctgtttgaagtgcgtgctgagaacgac
gtcaaagccatctaccgcgcactgcagcgcattctcctcaactacaaggaggagcgacgt
ggtccgaccctgattgctgttcagtctaactgggagctgcgcaggctggcggctggcatg
actgtactggaggagttcccggtggttccggttcacgttattgatgagataagttacaac
gtactggactggcagcggcatggagctcgtcgcatgataaaacactacctgaacctggac
agctgcctctcacaggcttttgatatggccaggtattatcacctgcctgtgggaaatctg
cctcaggacatttctatatttggatcagatctatttcttgcacgtcatctgagaaagcac
aaccacttgttgtggctgtcacctacggcacgtccggacctcggggggaaagaggctgac
gacagcagactggtgatggagagtgatgagagaggctccatggagatcaatagccatggc
tgctactcaacagtttgtgtggagttggatattcagagtttggcggtgaacaccattcta
cagtcccagcacgtcaatgacatggaaggcggggccagcattggtgtcagctttgatgtc
attcagcatgcttctctggaggaaatgatgtcagggaatcagggggcaaacacagtggcc
agctatgacgagacggcgctctgctccaacacattcaggattttgaagagtatggttgtc
ggttgggtccgagagatcacgcagtatcataatgtctacgctgataaccaggtgatgcat
ttttaccggtggttgcgatcacccagttctctgctgtacgacccggccctgcaccgaacc
cttctcaacatgatgaagaagatcttcctgcaacttgtggcagagttcaagcgcctggga
tcatctgtcatctatggaaactttaaccgtctcatcctctgcaccaagaaacggcgcatt
gatgacgccattgcatacgtggagtacatcactaacagtattcattcaaaggagatcttc
cactctctgtccatcacattctcacgctgttgggaatttctgctgtggatggatccagct
aactatggaggagtgaagggaaaactgccctctagccttctgtatggggagcatggcaat
gaaaagaagaaaaataaggatggagaagaggaggatggaagtgaagatgaggatgaagat
gaagaaaaccaaggggaagatgaagaacgggatggggaagatgacgtagaagacttgata
gaaagtaactggaacatcatgcagtaccttcctcagacatcatcctgtcagaaatacttt
ctcatgatcatttcagcctatattgcagctgtctatcacagcatgaaacaagagcttcgg
cgaaacgcccctggtgctactcccattaagagacgaggagcaacccaagcatcccagcag
ccaactggggatgtcagtgcacttcctggtttgattacattctctcaggagtatgtgtca
agtgaactcacacagaacttcttcaccatcactcagaagattcagaagaaggtgtcgagc
actcgtagtgttactcttccatctgagatgtttcctgttcttcctggttctcacttaccc
ctcaacaacccagctctagagtttattaaatacgtctgccaggtgctctctctggatgcc
aacattgtcaatcaggtgaacaaactgaagcgagatcttttgcgattagtggatgttgga
gagttttcggaggacgcccagttccgtgacccctgcaagtcctacatcctgccagaggtc
atctgccaccactgtaacttctgtcgtgaccttgacctctgcaaagaccctgctgtttcc
caggatggttcagtccttcctcagtggttctgctctaactgtcaggcccaatatgacaca
gagtccatagaaatggccctggtggaggcgctccagaagaagctcatgagttacacacta
caagacctggaatgttctaaatgcaaaggagtgaaggaagcaaatatgccaatgtactgc
agctgcgctggagatttcaacctcaccttcaccacaaagagcttcaccgaacaggtggaa
gtgttccggaacattgctgcccactataacatgaacttcctgctagagaccattgactgg
gtccttagtatgaacgcatag
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integrated database retrieval system
