Puntigrus tetrazona (Sumatra barb): 122346072
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Entry
122346072 CDS
T08985
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122346072 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptet01002
]
122346072 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122346072 (usp30)
04121 Ubiquitin system [BR:
ptet04121
]
122346072 (usp30)
Enzymes [BR:
ptet01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122346072 (usp30)
Peptidases and inhibitors [BR:
ptet01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122346072 (usp30)
Membrane trafficking [BR:
ptet04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
122346072 (usp30)
Ubiquitin system [BR:
ptet04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122346072 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
122346072
NCBI-ProteinID:
XP_043096669
LinkDB
All DBs
Position
5:12820605..12826178
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AA seq
507 aa
AA seq
DB search
MPWCKQGATDKLVREFLRTGTAARLGNKMMKNWGVIGGIAAAMAAGVYVLWGPISDRKKK
RKGGMVPGLLNLGNTCFMNSLLQGLAACPSFIRWLEDFTSESSIPPERTERDTHLSRSLM
QLLKALSSHDPGEDEVLDAGGLLEALRLYRWHISSFEEQDAHELFHVLTSSLEEERESQP
RVAHLFDMQTLEKSVETKEKNISCRTGGPLHPIPSLWRTRHPFHGRLTSYMACKRCEQQS
PVHYDSFDSLSLSIPSVQWGRPVTLDQCLQHFISSETIKEVECENCTKQQAGELVNGEVL
ESQKTTFVKQLKLGKLPQCLCIHLQRLTWSKEGAPIKKQEHVQFTEYLSLDRYKHCTAGQ
NLQSTRGTNKPISVKAAGDPKDKSIANGVDSEHCNNNKPLSNGTFPSIFLHSPGLSSQLN
LTYDYSSSEYLFRLTAVLVHHGDMHSGHFVTYRRCPAAPRGTSAFSSQWLWVSDDSVRKA
SLQEALSSSAYLLFYERVQRPGLRVGE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgccttggtgcaaacagggagctacagacaagctcgtccgagagttcttacgcacggga
accgctgccaggttggggaacaaaatgatgaaaaactggggtgtgatcggtggaatagct
gctgccatggctgctggagtctatgtattatgggggccaatttcagacaggaagaagaag
agaaaaggtggtatggttcctggtctgcttaatctggggaacacatgctttatgaactca
cttctccagggcctggcagcgtgtccttccttcatcagatggcttgaagactttacaagc
gaaagcagcatacctccagagagaactgagagagacactcatctgtccagatctctgatg
cagttactaaaagcgctgtcaagtcatgatcctggagaagatgaggttttagatgcggga
ggccttttagaagctctcagactttacagatggcacatcagctccttcgaggaacaagat
gctcatgagctctttcatgttctcacatcatccttagaggaggaacgtgaaagccagccc
agagttgctcacctgttcgacatgcaaacactggagaaatctgtggagaccaaagaaaag
aacataagctgcagaactggaggcccattacatcctattccaagtttatggaggacacgg
cacccttttcatgggcggttaacaagttatatggcttgtaaacgctgtgagcagcagagt
cctgtgcactatgattctttcgacagcttgtctctttctatcccgtcagtacagtggggc
agaccggtcactttggaccagtgtctccagcatttcatctcctctgaaaccatcaaagaa
gtggaatgtgaaaactgtaccaagcagcaggctggggaacttgtaaatggagaagtcctc
gagagtcagaagacaactttcgtcaagcagctgaaactcggaaagttgcctcagtgcctc
tgcatccatttgcagagattaacgtggtctaaggagggtgctcccattaagaaacaagag
catgttcagtttacagaatatttgtctctggatcgatacaaacattgtacagcgggtcag
aacctccagagcaccagaggaacaaataagcccatatctgtcaaagctgccggggaccca
aaagacaaaagcattgctaatggtgttgattcagaacactgtaacaacaataagccactg
tccaacggaacctttccctccatctttctacactcaccaggactaagctcacagctcaac
ctcacttacgactacagcagctctgagtatctcttccgcttgacggccgtcctggttcat
cacggagacatgcactctgggcactttgtcacttaccgccgctgccctgccgcccctcgt
ggaacgtctgctttcagctcccagtggctttgggtgtctgatgattcggtgaggaaagcc
agccttcaggaggcgctctcctccagtgcgtatctgctattttacgaacgagtgcaaagg
cccggtctgagggtgggagagtag
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