Puntigrus tetrazona (Sumatra barb): 122346154
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Entry
122346154 CDS
T08985
Symbol
si:dkey-3h3.3
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122346154 (si:dkey-3h3.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122346154 (si:dkey-3h3.3)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122346154 (si:dkey-3h3.3)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122346154 (si:dkey-3h3.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_10
zf-RING_5
zf-rbx1
zf-RING_4
zf-RING_11
KH_DTX3L
Zn_ribbon_6
DZR_2
zf-C3HC4_4
zf-RING_6
zf-Tbcl_FmdE
YdjO
Motif
Other DBs
NCBI-GeneID:
122346154
NCBI-ProteinID:
XP_043096781
LinkDB
All DBs
Position
5:15171061..15173837
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AA seq
416 aa
AA seq
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MKTSLPKIFSLVRLHLPNSVSSKSKTMKHEDVDFVASGSMAEAEVVYKSTIVQTTRVGSR
DTGREERPAQSNSSVVEPVNVDGIVMDYIEKIKSKELDTIKKRNAVIVKRDDKRVTFTSL
SGKNVHAHFAREHFVTLYQKTATGLQTRTYDHSRGIITLHQAEFPELLITHKDEKRLQLT
GNFISLDRFETFLNGSARSYLDYQTPNNSEVNDRPYKQPARERASIDQAKDEACPICLET
LETKESTDLPKCKHRFCKDCLRKAFQVKPTCPICGEIYGSLTGTQPKGGSMTVSSDKSSL
PGYENYDTLIISYHIPSGRQGDEHPNPGTPYHGASRIAYLPYSTEGSKVLKLLQRAFEQR
LTFTIGRSSTTGQNNVVTWNDIHHKTSRYGGPTSYGYPDPNYLKRVQDELKAKGIY
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaagactagcctgccaaagatattctctctagtgagactacacctgccaaattccgtt
tcaagcaaaagcaaaactatgaaacacgaagatgtcgattttgtcgccagcgggtcgatg
gcagaggccgaggttgtttataagagtacaattgtgcaaaccacacgtgttggaagtagg
gatacgggacgagaggagagaccagctcaaagtaactcctctgtagttgaaccagtgaac
gtcgacggcattgttatggattacatcgaaaagattaaatccaaggagcttgacacgatc
aaaaaaaggaatgcagttatcgtgaagcgagatgataaacgcgtgaccttcacgtctctg
tctggtaagaacgtgcacgctcatttcgcacgagaacacttcgtaactttatatcaaaag
actgcaacgggcctgcaaaccaggacatacgaccacagtcgaggaattattacgcttcac
caagcagaatttccagaactcctaatcactcataaagatgaaaagcggctgcagctgact
ggcaacttcattagccttgacagatttgagacgtttttgaatgggagtgctcggtcatat
ttagactaccaaaccccaaataactctgaagttaatgacaggccttacaagcaacctgcg
agagaacgcgcatcaatagaccaagccaaagatgaggcatgtccaatttgtttggaaaca
ctcgagacaaaggaatccacagacctgccaaagtgtaaacacagattttgtaaagactgt
ttgaggaaagccttccaggtgaagccaacttgtccgatctgcggagagatatacggcagt
ctcacagggacacaaccaaagggcgggagcatgactgtctcatcggacaagtcctcctta
cctggatatgaaaattatgatacactcataattagctaccatattccaagtgggcgtcaa
ggggatgaacacccaaacccaggcacgccgtaccatggtgcgtcccgcatagcttacctc
ccgtactctacagaggggagtaaagtactgaagcttctgcagagggctttcgaacagaga
ctcactttcaccatcggacgttcatctaccactggacagaacaatgtggtgacctggaat
gacattcaccataagacgtctcgttatggaggaccaaccagttatggctacccagatcca
aactacctgaaacgagtacaagatgaactgaaagcaaaaggaatttactga
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