Puntigrus tetrazona (Sumatra barb): 122346427
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Entry
122346427 CDS
T08985
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor HES-1-like
KO
K06054
hairy and enhancer of split 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03460
Fanconi anemia pathway
ptet04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122346427
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122346427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122346427
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122346427
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
122346427
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
122346427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
122346427
NCBI-ProteinID:
XP_043096974
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Position
6:complement(17553503..17555239)
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AA seq
270 aa
AA seq
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MPADIMEKNSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNMQRAQMTAALNTDPTVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLASCMTQINAMNYPTQHQIPAGPPHPSFSQPMVQIPSA
TQQANVVPLXGVPCKSGSSSNLTSDATKVYGGFQLVPATDGQFAFLIPNAAFAPNGPVIP
VYANNSNTPVPVAVSPGAPSVTSDSVWRPW
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgatatcatggaaaaaaactcctcttctccggtcgccgcgactccggcgagc
atgaacactacacctgataaacccaaaacggcttccgagcatagaaagtcttctaaacct
attatggagaaaagaagaagagcgaggatcaacgagagcttgggtcagctgaaaacgcta
atcttggacgctctgaaaaaagatagctccagacactctaaactcgagaaagcggacatc
ctcgagatgacagtgaaacatcttagaaacatgcagcgagcacaaatgaccgctgccctg
aacacggatcccaccgttctcgggaaatacagagctggattcagtgaatgcatgaacgag
gtgacccggttcctgtccacctgcgaaggggttaacaccgaggtcaggacccggctgctg
ggtcacttagccagctgcatgacgcagatcaacgccatgaattatccgacacagcaccag
atacctgccgggcctcctcacccatccttcagtcagccgatggttcagatccccagcgcg
actcagcaagccaacgttgtgcctcttngcggagtcccctgcaaaagcggatcttcctcc
aacttgacttctgacgcaacaaaagtatacggaggtttccagctcgtgccggcaacagac
ggacaattcgcctttttgattcccaacgctgcctttgctccaaacggtcccgttattcca
gtgtacgccaacaattccaacacaccggttccggtggccgtgtctccgggagcaccgtcc
gtcacgtcagattccgtttggcggccttggtag
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