Puntigrus tetrazona (Sumatra barb): 122346507
Help
Entry
122346507 CDS
T08985
Symbol
crocc2
Name
(RefSeq) LOW QUALITY PROTEIN: rootletin
KO
K16469
rootletin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ptet03037
]
122346507 (crocc2)
Cilium and associated proteins [BR:
ptet03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
122346507 (crocc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
ATG16
Motif
Other DBs
NCBI-GeneID:
122346507
NCBI-ProteinID:
XP_043097132
LinkDB
All DBs
Position
6:12765821..12805700
Genome browser
AA seq
1956 aa
AA seq
DB search
MSCEGDQGLEAVIQKLEETLLNPDSGGEEKTYTLRGDEEESNVTPVPARIREIITRNLAD
TPTGESSEVEENRLPKDLPSQMCADRDQLLSRQAALTSRLEQMLLQQSGDSDQQSLFGAE
QGWLREEGRSYRLKLQAFQESQHRQAQLVQKLQAKLLQYKRRCGNLEQQVLEKTSESEKL
RLSLQSHLDSSAHRLQRFEQEHNMDVQSKLALLEDEQKRCSGLSQVNALLREQLEQANEA
NQALTESLQKAREEAEQRDTRLRRELEMNTSRNGREQARVRSLWRQAAFLRSSFTQLRAF
ADRSLSDMRAECAVAGHRLQTACVNLEASMSQPCTPAISGVSALENQLRGKLKDAMQLQA
RFDAEKVELNSRILELGEMVKQLRAQNIEKESNLTALRSSLDRMEINRSEDRTERDALRS
EISSLQQLLHNINQVVSGESSSDLSKDQHPSAGSISSSQRDSIPVSVQKALLQRQAQIQE
LQGRLDASQEQVATLRDQLRMGEDETRSLEQRIRELQQENQLLERSEEDSTRDALRYRTS
LGIVNSEKGELERQLSGLQQQLECTQTEQEALRSSSLDVQRQRDLLRQQREDLXRQLARE
RSESERGRHSLEQLEMRHSDVRKELVTLKEALSQLTLQKEVLEDEKSTLAQALSRAEAQN
AEQELALTKLRSEDAGLQDSLAKMGALSEGLAKDKVELNRLLLQVEAEKAELGERKREAE
LERAAAREELARLQQELLDLTAEKRALEASHIHLQESQVTQEAECNLLQKEKSSALEQHA
QVSKQKQTLQGQLNTCHREMELSAASLKKTCKERDELARDKANLTVQLTSEQRKSKALAQ
DLAALRAERESLESGLLDRQELASMLEDDRARLDGENTSLQQANETLTRELSNVHSELEQ
QMTRALQEKQALELKLAQVERNAQQTLITTQQSHQDQLHAERKHKERMRVELCAQREQAE
SQLRAECKELRMQSRRVQQQLQEELAKLQQHCTESLLQAESHKQQVLSEKEVEKATLTER
IITLERDIETAALEKDRMRRDFLSKQEQDKDTLLGLQVELQDLRSRFGESLSSREVSERS
LNDQIRELSMQKQESQQEVERLRRELNEVEESRDSGRKELIEAHRELRECLQDRDAQRHE
GLELKRALGDVAREKEAIHASNHELRTAVKRAEFENNSLKRVGEEKDQRLAVLEECKSSL
QQEALKLRTNMRELEKSRLQARRELQELRRQVKTLEGQCTQQGQELSDMQARLTQEEHRE
EEMRKETFALRQRVLECDAGREAALKEAAGLQRRVAELEEVQRQEKELQQQQDANLQESQ
MKQREEVARLEGALQEAQAQLREFGLKVSLAEARAQGLEEQLGQNDAIRRDLEHRLNVLS
STLKRTLGSGRGRCSPAPGERGRSPSPWRTRSPVKGEPKSDEPGVSGLLVCSLSPSHGED
GELDLDSVHMLLRNFQQELRDTQRERDEAQSQVHNLSKQVESLQASQERGNTRVQMLKQS
LRELEDGKRELAKHLEGTQASLALRDEAVQRGELQNRIMSEELAKMKNSQQITEAEAKAL
KEKLERSQATEESLEAERRRMKETCETAEARAARLELTRRGLEGELQRAQLRATETESEV
SSLQDRLNNLRRELGDSEERAALLKVEGERLATALAHTELQESQLREQLQSMTASLTESN
AAIGAAQEQAAQLQRALTANEHDRKMLQERLDKTREALTNSRKQNQGLSEKLQILQRSQE
ESELRVSELDKQTRGLQEAVRQRQQAKQEVQESYALLQGQKDQLQEQVATLQTTAHRLQG
DKTELERALLRLEKDRSSLKRTLEKVEKNRQRKEAEILHVEREREQQEQKIRNLEQDLSE
TQAEIHTLQSQISILEQTHSQRLLEVTARHRQELDLETERMRDSQQQAERALEAREKAHR
QRVHCLEEQVCTLKEQLEQEMKRRQAYMKQMMRLGL
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtgaaggggatcaaggactggaagccgtgattcagaagctggaggagacactg
cttaacccagatagcggtggagaggagaagacttacactctgaggggagatgaagaggag
tccaacgtcacgcccgttcccgctcgcatccgtgagatcatcaccagaaacctggctgat
acgcccacaggcgagagcagcgaggtggaggagaaccggctgccgaaggatctgccttct
cagatgtgcgcagacagagaccagctgcttagcaggcaggctgctctcactagccggctg
gagcagatgctgttgcagcagtcaggagattcagaccagcagagtctgtttggcgcagag
cagggttggctaagagaggaaggacgatcttataggctgaagctccaggcctttcaggag
agccaacacagacaggctcagctggtgcagaaactacaggcaaagttgctccaatataag
aggagatgtggaaatctagagcagcaggtgctggagaaaacctcagagtcagagaaactg
aggctctctctccagtctcacctagactcttcagcacaccgtctccagcgttttgagcag
gaacacaatatggatgtccaaagtaaactcgctctgttggaggatgagcagaaacggtgt
tctggtttgagccaggtcaatgcactgctccgggaacaactcgaacaagccaacgaagcc
aatcaggccctgacggaaagcctgcagaaggcacgagaggaggcagagcagagggacacg
cgactcaggagggaacttgagatgaatacctcccgaaacggccgcgagcaagcccgtgtg
cgatctctgtggcgccaggcggccttcctgagaagctcttttacccagctgcgggccttc
gctgacaggagtctgtcggacatgcgagccgagtgcgcggtggctggccatcgtcttcaa
acagcctgtgtgaatttggaggctagcatgagccagccttgtacccctgctatcagtgga
gtatctgcattggagaatcaactaagaggcaaactaaaagatgctatgcagctgcaagcc
cgctttgacgcagagaaagtagagcttaactctaggatcctggaattgggtgaaatggta
aagcagctgagagcacagaacattgagaaggaaagcaatctgacagcactgcggagcagc
ttggacaggatggaaataaatcggtccgaagaccgaactgagagggatgccttacgtagt
gagatcagcagtctgcaacagttactgcacaacattaatcaggtggttagtggtgaaagt
tcctcagacttatcaaaagatcagcacccatctgcaggatctatttcctcttctcaacga
gacagtattccagtatctgtgcaaaaagccctcttacagcggcaggcacaaattcaggag
ctgcagggacgtctggatgcttcccaagagcaggttgccaccttgcgagatcagctgcgt
atgggggaagatgaaaccagaagcctggaacaaagaatccgggaactgcagcaagaaaat
caacttctggagagatctgaggaggacagcactagagatgccctaagataccgcacctca
ctgggcatagtaaacagtgaaaaaggagagcttgagaggcagctctcaggcctgcagcag
cagctggaatgcacacaaacagagcaggaagctttgagaagctcttctctggatgttcag
aggcagagagacctcctcaggcagcagagggaggacctgnngaggcagctggctcgagaa
cgctctgaatccgagaggggacgacactctctggagcagctggagatgagacactcggat
gtgcgcaaagagctggtcacactaaaagaagctctgagtcagctgactttacagaaagag
gttttggaggatgaaaagagcactcttgcacaggctctctccagggcggaggcccagaat
gctgagcaggaactggcgctcactaaactacgaagtgaagatgcagggctacaggactcc
ctggccaagatgggagccctgagtgagggattggctaaagataaggtcgaattgaaccgt
cttctcttacaggtcgaagctgaaaaggctgagctcggcgaacgtaaacgggaagcagag
ctagagcgagcggcagccagagaggagctagccagacttcagcaggagctgttagaccta
acggcagagaaacgtgctctggaggcctcacatattcaccttcaagagagtcaagtgacc
caggaagcagagtgcaacctcctacagaaggagaaaagttcagccctggagcaacacgcc
caggtcagtaagcagaagcaaaccctgcagggacagctgaacacatgtcatagagaaatg
gagctcagtgctgcctcgctaaagaagacttgcaaggaaagagatgaactggcgagagac
aaagccaatctcacagtgcagctcacctcagagcaacgtaaatccaaggccctggcccaa
gacctggccgctctgcgggctgagagagagtctctagagtcaggcctgttggacaggcag
gaactggcctcaatgctagaggatgaccgggctaggctagatggagagaatactagtcta
cagcaggctaacgagactttgacgcgtgagctgtctaatgttcacagtgaactagagcag
caaatgacccgggcattgcaggagaaacaggctttagagttgaagcttgctcaggtcgag
agaaacgcacaacaaaccctcattacaacacagcaaagccatcaggatcaactgcatgcg
gagcgaaagcacaaggagcgcatgcgtgtggagttgtgtgcacagagggagcaggcagag
tcgcagctgcgggctgagtgcaaggagctgcgcatgcagagtcgcagagttcagcaacag
ctgcaggaagaacttgccaagctgcagcagcactgtacagaatccctgctgcaggccgaa
agccataaacagcaggttctatctgagaaggaggtagagaaagctactcttactgagcgc
ataattaccctcgagcgtgacatagagacagctgcccttgaaaaggatcgtatgcgtaga
gacttcctgagcaaacaggagcaggacaaggacacacttttaggtttgcaggtagagctt
caggacctacgctctcgtttcggggagtctctgagttcccgtgaagtttcagagcgcagc
ttaaatgaccagatcagagagctttctatgcagaagcaggagtctcagcaagaggtggag
cgtttgagaagggaactgaatgaggtggaggagagcagggactctggccgtaaggaacta
atcgaggcccacagagagctgagggagtgtttgcaggacagggacgcccagcggcatgag
ggcttggaactgaagagagctctaggagatgttgcgagagaaaaagaggccatccatgct
tccaatcatgaactccgaacagctgtgaagagagccgagtttgaaaacaacagtttgaag
cgagtgggagaagaaaaggatcagaggctggcagtgctggaagaatgtaaatcctcccta
cagcaggaggcgctgaagctgagaaccaacatgcgtgaacttgagaaatctcgcttgcag
gcacgcagggaactgcaggaactgcgcagacaggtgaagacattagagggtcagtgcact
caacaagggcaagagttgagtgacatgcaggccagactgacccaggaagagcatagagag
gaggaaatgagaaaagagacatttgctctccgacaaagagtactggaatgtgatgctggc
agagaagcagctctgaaggaggctgcaggcttgcagcggcgtgtagcagaactggaagaa
gtgcagcgccaggagaaagaattgcaacaacaacaggatgccaatcttcaggagagccaa
atgaagcagcgtgaggaggttgctcgcttggagggggcactgcaggaagcccaggcccag
ctcagggagtttgggctgaaggtaagtctagctgaggcccgggcccaagggctggaagag
cagctgggacagaatgacgccatacggagagatcttgagcacaggttgaatgttctcagt
tcaaccctgaaacgtacacttggaagcggacgtggaagatgttcacccgcacctggggaa
cgcgggcggagtccctcaccatggagaactcgatcacctgtgaaaggtgaacccaagtca
gatgagcctggggtaagtggattgctggtgtgttctttgtccccctcccacggagaagat
ggagaattggatttggactcagttcacatgttgctacgtaacttccagcaagagctcagg
gacacacagagagagcgggatgaggcccaatcacaggtgcataatctcagcaagcaggta
gaaagcctgcaagccagtcaggaaagaggcaacacacgtgttcagatgctgaaacaatct
ctcagagagcttgaggatggaaagcgtgagctggccaagcatttagaggggacacaagca
tcactcgccttacgggatgaggcggttcagcgtggggagttacagaataggattatgagt
gaagagttggccaaaatgaagaacagccaacagataactgaggcagaagccaaagcactg
aaggagaagctggagcgctcccaggccactgaggaaagtctggaggctgagcgccgccgt
atgaaggagacctgtgagacagcggaagctcgagctgccaggctggaactcacacgccgg
gggttggagggagagctgcagcgtgcccagctccgagccacagagacagagtcggaggtc
agctcactgcaggaccgcctcaacaatctccgcagagaactgggagacagcgaagagcgt
gctgccctcctgaaggttgagggtgagaggctggcaaccgccttggcacacacagaactg
caggaaagccagttaagggagcaactgcagtcaatgactgcatccttgactgagagcaat
gctgctataggagcagcacaagaacaggccgcacagctacagcgagctctcacagccaat
gaacatgaccggaagatgctgcaggaaaggttggataagacacgagaggctctaacaaac
agtaggaagcaaaatcaaggcttgagtgagaaactacagatcctgcagagaagccaggaa
gagtctgaactcagggtctctgaactggacaaacagacacgaggcctgcaggaggctgtg
agacaaaggcaacaggctaagcaggaggtgcaagagagctatgcactcttgcagggacaa
aaggatcagcttcaggagcaggtggctaccctgcagaccactgcacatcggctacaagga
gacaaaactgagctggagagggcacttctccgtctggaaaaagacaggtcatctctaaag
cgtaccctggagaaggtagaaaaaaatcgccaaagaaaggaggcagagatattgcatgtg
gagcgtgagagagaacagcaagaacaaaagatacgaaatctagagcaagatctaagcgag
acgcaggccgaaattcacactctacagtcacagatctctattttggagcaaactcactcc
cagaggctcctggaagtgactgctcgccacaggcaagaactggacttagagacagagcgg
atgagggactcccagcagcaggcagagagagcactggaggctcgagagaaagctcaccgc
cagagggtccactgcttggaggaacaggtttgcacactaaaagaacagttggagcaggag
atgaagaggaggcaagcgtatatgaagcagatgatgagattggggctctaa
DBGET
integrated database retrieval system
