Puntigrus tetrazona (Sumatra barb): 122346608
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Entry
122346608 CDS
T08985
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04060
Cytokine-cytokine receptor interaction
ptet04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122346608 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
122346608 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ptet04052
]
122346608 (gdf5)
Cytokines and neuropeptides [BR:
ptet04052
]
Cytokines
Transforming growth factors (RSTK binding)
122346608 (gdf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
122346608
NCBI-ProteinID:
XP_043097277
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Position
6:complement(25785206..25790076)
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AA seq
497 aa
AA seq
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MKVLTSLPLLLGFWTLLYLDFIPQALSIAGVAGHRGAGTAKANPRLPVARNGTTLAKPSD
NAKISRIRAGPPPIKAEGHPARAAVPVNLGRREAARSWVPKDAARVASSSSIQHQAGHNK
GVSAQKSAAPAAIRAAQSNAGVMKSIAPAPAHLRAARLEDSEEPKHPLVTPHDYMLSLYW
SLTSGEVNTSVLHEAGMANTITSFVDRGQDDRGPLLRRQRYLFNISSMEKEGLLGAELRI
LRKKHMDFRKATFTEGTAALRLYTCASGKHGPVLLTPPRRIDSHSAPYWEVFDIWKLFKN
FRNAPQLCFELDAVDQGRPLDLRLLGLGRAGRQNQEKAFFVVFGRTKKRGLFYNEIKARS
GHDNKTVYEYLFTQRRMRRAPLPRGKKPAKNPKQRCNRKQLHVNFKEMGWDDWIIAPLEY
EAFHCDGVCDFPIRSHLEPTNHAIIQTLMNSMDPRSTPPTCCVPTRLSPISILYIDSANN
VVYKQYEDMVVESCGCR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttctgactagtctccctcttttattgggcttctggactctgttgtacctggat
ttcatcccgcaggcgctctccatcgccggcgtggccggtcacaggggcgccgggacggcc
aaagccaatccgcggttaccggtggcgcgcaacggcacgactctcgctaagccctcagac
aacgccaagatctctcgcatccgcgccggcccgcctccgatcaaggccgagggtcacccg
gctcgtgccgcggtccctgtgaatttggggcgcagggaggccgcgcgctcttgggtaccc
aaggatgcggcgagagtcgcatcctcttccagcatccagcaccaagcgggacacaataaa
ggagtttctgcgcagaagtccgccgcgccggctgcgatcagggctgctcagtccaacgcc
ggcgtgatgaaaagcatcgctccggcacctgcgcatctgcgagcggcgaggctggaggac
agcgaggagcccaaacaccctttagtgacgccccacgactacatgctgtccctgtactgg
tcactgaccagcggggaggtcaatactagtgtcctgcacgaggctgggatggccaatacc
atcaccagctttgtagatagaggacaagatgaccgcgggcccctcctgaggcgtcagcgg
tacctcttcaacatcagctcaatggagaaggagggtctgttgggcgcagagctccgcatc
ctccgaaagaagcacatggacttccgcaaggccacgtttactgagggcacggcggctttg
agactgtacacctgtgcctcaggtaagcacggaccggtccttctgacgccgccacgacgt
atcgactcccacagcgcgccgtactgggaagtgtttgacatctggaaactgttcaagaac
ttcagaaacgctcctcagctctgctttgagctggacgcggtcgatcaaggccgaccgctt
gacttgcgattactcggcctgggtcgcgcgggaagacaaaatcaggagaaagccttcttt
gtggtgtttggccgtacgaaaaagcgagggctcttttacaacgagatcaaagcccgttcg
ggtcacgacaacaagaccgtctacgagtacctcttcacccagcggcggatgcgtcgggct
ccgttgccacgagggaaaaaaccggccaagaaccccaaacagaggtgcaaccgcaagcag
ttgcacgtcaacttcaaggaaatgggctgggacgactggatcatcgcgcctctggagtac
gaggccttccactgcgacggcgtctgcgactttcccatccgctcgcatctggagccgacc
aatcacgccatcatccagacgctcatgaactccatggatcccagatccacgccaccgacc
tgctgcgtcccgaccagactcagccccatcagtattctgtacattgactcggccaataat
gtggtgtacaagcagtacgaggacatggtggtggagagctgcgggtgcaggtag
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