Puntigrus tetrazona (Sumatra barb): 122346623
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Entry
122346623 CDS
T08985
Symbol
sorcs3
Name
(RefSeq) LOW QUALITY PROTEIN: VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122346623 (sorcs3)
Membrane trafficking [BR:
ptet04131
]
Endocytosis
Others
Others
122346623 (sorcs3)
Endosome - Lysosome transport
122346623 (sorcs3)
Endosome - Golgi transport
122346623 (sorcs3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
122346623
NCBI-ProteinID:
XP_043097301
LinkDB
All DBs
Position
1:23684795..23732246
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AA seq
865 aa
AA seq
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MEAHTPEGHCQYVTCRAQACSESSRTYPFSGYIETNSLVVQDEYVFVQVTTTGRASYYVS
YQREAFVRIKIPKYSLPKDMHIVSTDQGQVFTAVQEWNQNDTYNLYISDTRGIYFTLAXE
NVWTSRGLGGNSMIDLYEVAGIEGMLIANRKVENQVKTYITYNKGRDWRLLQAPATDLAG
NPIHCVLPFCSLHLQLQMSENPYLXGSISTKSSAPGVIVATGNIGSELSYNNVAMFISSD
AGNNWRQIFEEEHNVCVLDKGGALVAVKQPTVPTRHLWISFDEGRQWTRHSFSAMPLFVD
GVLVEAGAENQIMTXVFGHFSHRSEWQLIKIDYKSIFTRRCTEGDYQTWHLHNQGEPCIM
GQKQIYMKRRPGNYCMVGWDNSRILSAEPCICRAHDFECDYGFERRGDGNCLPAFWFNPS
TLSRSCSQGQNYLNSTGYRKVVANNCTKGVKEMYTARKQQCPNRPPRGLVLTTRDDKFTA
NMGSNVTFLVRLEEGDSMRTNIQLDFGDGTAVSYSNLSWTQEGIRHVYRSAGIFRVTALA
ENSLGFDTSSLYLHVTCPVEHIQLLAPYVVIKNKEVNLTAVVWPSHFRTLTYFWWLGNNT
EPIITLDSSISHTFSTEGMVTVTVQVSSGDSILQDTRNIAIQEFFKSLLLSFSPNLDEAN
PDIPEWRQDVGRVIKKAVLQVADIPEEQLLVAVFPGIPTAAELFLLPPRNQSDGRKRTEE
DLEQISEILVNALNQISVEFELKPGSRVIVYITQLTLAPLVDSIPRHSSSAMLMLLSVVF
LGLAVFLIYKFKRKIPWINIYAEVNHEKEQEMISTVGQNDATPKITLSEFSTQKELMEKE
LEARAKRGVINTCESTREIPNCTSV
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggaggcacacactcctgaaggccattgtcagtatgtgacatgcagagctcaagcctgc
tctgaatccagtaggacatatccattttctggctatattgagaccaattcgcttgtggtt
caagatgaatatgtgtttgttcaggtgacgaccactggcagagcaagctattatgtgtcc
tatcaaagagaagcttttgtacgcattaaaatccccaaatactccctgcccaaggacatg
catatcgtgagcacagatcaaggtcaggttttcaccgccgtccaggagtggaaccagaac
gatacctacaacctgtacatatctgacactcgtggcatatacttcaccttggccnctgag
aacgtctggactagccgcgggctcggaggcaacagcatgatcgacctttacgaggtagca
gggattgaaggcatgctcatcgctaataggaaggtggagaaccaggtgaagacgtacatt
acgtacaacaagggccgggactggaggcttttgcaggcgcccgctactgacctggcagga
aatcctattcattgtgtgctgccgttttgctcgctgcacctacaactgcagatgtcagag
aacccgtacctcntcggctccatctccaccaagagctcggcgccgggagtcatcgtggct
acaggaaatattggctctgagctgtcttacaataatgtggcgatgttcatttcatcagat
gcgggcaataactggagacagatttttgaggaagaacacaacgtgtgtgttttggacaaa
ggtggagctttggttgccgtgaagcagcccactgtgcccaccagacatctttggatcagc
tttgatgaaggtcgtcagtggacacgtcacagtttctcagccatgccgctgttcgtcgac
ggtgttctggtggaggcaggtgcagaaaatcagatcatgacgtaagtttttgggcacttc
agtcatcgttctgaatggcagcttatcaaaattgactacaaatccatatttaccagaagg
tgcacagagggggactaccaaacctggcacctgcataaccagggtgagccgtgcataatg
ggtcaaaagcagatctacatgaagcgtcgtcctggaaactactgcatggtgggatgggac
aactccaggatcctgtctgcagagccctgcatttgcagagcgcacgactttgaatgtgat
tatggttttgagagaagaggggatggaaactgtttgcctgcgttttggttcaacccttcc
acgttgtctcgaagctgcagccaagggcaaaactacctcaacagcacagggtatcgtaaa
gtggtagcgaataactgcacgaaaggagtgaaggagatgtacacggccaggaaacagcag
tgtccgaatcgccccccgcgaggtttagtcctgacaacccgtgacgacaaattcacagcc
aacatgggcagcaatgtgaccttcctggttcgcctagaggagggcgactctatgaggaca
aacattcagctggacttcggggacggtacggccgtgtcctactccaacctgagctggacg
caggagggcatccgacacgtgtaccgcagcgccggcatcttcagagtcacagcgctggcg
gagaacagcctcgggttcgacacctcatccctctacctgcatgtgacgtgccccgtggag
catattcagctgctggctccgtatgtggtcattaagaataaagaggtgaacctaacagca
gtggtctggccttctcatttcagaacgctcacctatttctggtggctggggaacaacacg
gagcccataattacgttggacagcagtatttcccacacgttcagcaccgagggcatggtc
accgtcactgttcaggtgtcatcaggagactctatactgcaggacaccagaaacatcgcc
atacaggaattcttcaaatcgcttcttttatctttctctcctaatctggacgaggccaac
cccgacatcccggagtggagacaggatgtgggtcgggtaattaagaaggctgttctccaa
gtcgctgacatcccggaagagcagctgctggtggccgtgtttcctggcatcccgacagcg
gccgaactcttcctacttcctcccaggaaccaatcggatggcaggaaacggacagaggag
gatctggagcagatttcagaaatcttggtcaacgcactgaatcagatctctgtggagttc
gagttgaaacccggctcccgggtcatcgtttacatcacgcaattaactttagctccactg
gtcgactccatcccgagacacagcagttctgctatgctgatgcttctgtctgtggtgttt
ttgggtttagctgtatttctcatctacaaatttaagagaaaaatcccttggattaacatc
tacgcagaggtgaaccacgagaaagagcaggagatgatcagcacggtgggccagaatgac
gccacgccaaaaatcaccctgagcgagttctctacccagaaagaattgatggaaaaagag
ctggaggcccgtgccaaacgcggtgtgatcaacacctgcgaaagcacaagggagatcccg
aactgcacgagtgtctga
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