Puntigrus tetrazona (Sumatra barb): 122346770
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Entry
122346770 CDS
T08985
Symbol
cfap52
Name
(RefSeq) cilia- and flagella-associated protein 52
KO
K24728
cilia- and flagella-associated protein 52
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ptet03037
]
122346770 (cfap52)
Cilium and associated proteins [BR:
ptet03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
122346770 (cfap52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_like
Beta-prop_IFT122_1st
Beta-prop_HPS5
ANAPC4_WD40
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_VPS8
KNTC1_N
Beta-prop_RIG_1st
WDR54
Motif
Other DBs
NCBI-GeneID:
122346770
NCBI-ProteinID:
XP_043097561
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All DBs
Position
6:complement(10509922..10516964)
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AA seq
620 aa
AA seq
DB search
MAEDAQEVPQIALEAVIGFNGHVISGLKVHPDKEHLIYPLGCTVIIKSLRSGKQTFLHGH
TNNVSCISVSKSGRYIASGQVTFMGFKADVIIWDYEKKEIYARLVLHKARVEDLSFSPND
KYMVSLGGQDDGSIVVWNIESKEAICGSPASAQSAGHCLTIKYTNLNDEIFVSAGNGTLR
VWELDLLNRKIRPTECQTGQLKRIVKCLEIPDDDNYFYCGTTSGDILKVNLKTRLLNSCG
PVKQKFSKGVNTLKVLKTGDILVGSGDGMLSLCSGGNFKTIKSVQLEGGVTSVTLRGDGH
QFYVGTEAAQIYSLGYIDFKPELIATNHNSAVKDVAFPFGTSELFATCSQNDIRVWHTES
SKELLRIMVPNITCNALGFMQDGRSIFSAWNDGKIRVFTPESGKLKLIIHNAHSMGVTAI
AATNDCKRIVSGGGEGQVRVWEIFQNSYRLIETMKEHKATVNCIKIKSNDKECVTASSDG
ACIIWDLVRFVRNQMVLSNTLFSVVCYHPEEFQIITSGTDRKIGYWEVYDGSAIRELEGS
LSGAINGMHISDEGKYFVTGGDDKLLKLWHYSDGEVTHVGVGHSGSITNVRICPNSRCIV
STSADGAILRWRYPRTLNSE
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagacgcgcaagaagtccctcagatcgcattagaggctgttattggttttaat
ggtcacgtgatttctggactcaaagtgcatccagacaaagagcatctcatttatcctctt
ggctgcactgttattatcaaaagtttgagaagtgggaaacaaactttcctccatggccac
acaaacaacgtctcttgcatttctgtgtccaaaagcggacgctatattgcatccggacag
gttactttcatgggctttaaggctgatgttattatctgggactatgagaagaaggagatt
tatgcccgtcttgtgcttcataaagccagagttgaagatctaagcttctccccaaatgat
aagtatatggtatccttgggcggacaggatgatggcagcatcgtagtgtggaacatcgag
agcaaggaggctatatgtggcagtcctgcttcagcacagagcgctggacactgcctcacc
attaagtacaccaatctgaatgatgaaatcttcgtctctgctggaaatggaactctgcgt
gtgtgggagctagatttgctcaacagaaagatccggcccacagaatgccagactggacag
ctcaaaagaattgtcaaatgtctagagatcccagatgatgataattatttctactgtgga
actactagcggagatattctgaaagtgaacctgaagacgaggttgctcaacagctgcggt
cctgttaaacaaaaattcagcaagggagtgaacactcttaaagtcctgaagactggtgat
attttagttggatcgggggacgggatgttgtcgttgtgttcaggagggaatttcaaaacc
attaagagtgttcagttggagggaggggtgacatcggtgaccctgcgtggagacggccat
cagttttatgtcgggacagaagctgcacagatctacagtttaggctacattgacttcaag
ccggaactcattgcaacaaatcataacagcgccgtaaaggacgtggcctttccctttggg
acgtcagagctgtttgccacttgttcacagaacgatatacgagtgtggcatacggagtcc
tctaaggagcttctgcgtatcatggttcctaacataacgtgcaacgcgttgggcttcatg
caggacggcaggagcatcttcagtgcttggaatgatgggaagattcgcgtgttcactcca
gagagtgggaagctgaagctgatcattcataatgcccacagcatgggagttactgccata
gcagcgaccaatgactgcaagaggatcgtcagtggagggggagaaggacaggtgagagtc
tgggagatattccaaaactcatatcgtctcattgagaccatgaaggagcacaaagccacg
gttaactgcatcaagatcaagagtaacgacaaggagtgtgtgacagccagctccgatgga
gcctgcatcatctgggacctagtgaggttcgtgaggaatcaaatggtcttgtccaacacc
ctgttcagcgttgtatgttaccaccccgaggaattccagatcatcaccagtggcactgac
agaaagattggctactgggaggtgtatgacggttctgcaatcagagaactcgagggctcc
ttgtctggagctataaacggcatgcacatttctgatgagggaaaatattttgtgactggt
ggagatgacaaattactgaagctctggcactattctgacggcgaagtgacccatgttggc
gtggggcacagcggaagcatcacaaacgtgaggatctgtcccaacagcagatgcattgtg
agcaccagtgccgacggagccatcctaaggtggagatacccacgaaccctaaacagtgaa
taa
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