Puntigrus tetrazona (Sumatra barb): 122346800
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Entry
122346800 CDS
T08985
Symbol
ddx17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptet03041
]
122346800 (ddx17)
Enzymes [BR:
ptet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122346800 (ddx17)
Spliceosome [BR:
ptet03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122346800 (ddx17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122346800
NCBI-ProteinID:
XP_043097585
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All DBs
Position
6:8457366..8466430
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AA seq
666 aa
AA seq
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MRGSSSYGDRDRDRGRDRGPRFGSSRVAPAPPKKFGNPGDRLRKKKWDLDQLPKFEKNFY
SEHPEVHHMSQYDVEEYRQKREITVRGSGCPKPVTNFHQAQFPQYVMDVLLQQNFKEPTA
IQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTREL
AQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLHDYVQ
INIGALELSANHNILQIVDVCMENEKDNKLIQLMEEIMAEKENKTIIFVETKKRCDELTR
RMRRDGWPAMCIHGDKSQPERDWVLSEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP
NSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVDTGR
GGGGGGRMRYRGNNSGSNNPNLMYQDECDRRMRSVTGSNKGSRSNNMSRDARPGGSNRDD
RMSSSYRDRSRDGRNNYNSGPSYNSGGGDQYQSCGGGGGGQYGSRGGSSHPGGAGGGGAG
GQDQAGPPQGLFGPPPPTPPQPGPGPQPLMAQQFPPPPQPMMGFMGPGPYPFASPPPPLP
PPPPRK
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaagttcctcatatggagaccgtgacagagatcgaggacgagacagagggcct
cgctttggatccagtcgagttgccccagctccacccaaaaagtttgggaatccaggagat
cggctgaggaagaagaaatgggacctggaccagctgcccaagtttgagaagaacttttac
agtgaacacccagaggttcatcacatgagtcagtatgatgtagaagaatatcgccagaag
agagagatcactgtcagaggctctggctgcccaaagcctgtcaccaacttccatcaagct
cagtttcctcaatacgtgatggacgtgctgctgcagcagaactttaaggagcccactgct
atccaggctcaaggttttcctttagctctcagtggcagggacatggtgggcatcgctcag
accggctccggaaaaacactggcttatctgctgcccgccatagtgcatattaaccatcag
ccgtacctcgagagaggggatgggcccatttgccttgtgttggcaccgacacgtgaatta
gcccagcaggtgcagcaagtggcttatgactatggcaaatcatctcggatcaagagtacc
tgtgtgtatggaggagcccctaagggtccacaaatcagagatttggaacgaggtgttgaa
atctgcattgccacacctggccgtctgatcgatttcctggaggcgggaaaaaccaacctg
cgtcgttgcacctacctggtgctggatgaggctgatcgtatgttagacatgggatttgaa
ccccaaattcgcaaaattgttgaccaaattagacctgacagacagactctcatgtggagt
gccacctggcctaaagaggttcgtcagctggccgaagacttcctccatgactatgtccaa
atcaatataggagctctagaattgagcgccaaccacaacatcctgcagatagtggatgtc
tgcatggagaatgaaaaagacaacaagctaattcagctgatggaggaaatcatggctgaa
aaggagaacaaaaccatcatctttgtcgagacaaagaaacgttgtgatgaactcactcgg
agaatgagaagagatgggtggcctgcgatgtgtattcatggtgacaagagccagccagag
agggactgggtactatcagagttccgcagtggaaaagctccgattctgattgctactgac
gttgcttcacggggtctggatgtggaggacgttaaatttgtcatcaactatgactatcca
aactcttcggaggattatgttcatcgtattgggcggacagcccgcagcaccaacaaagga
acggcctataccttcttcacccctgggaaccttcggcaggctcgtgatttagtccgggtt
cttgaggaggctagacaggccatcaatcccaaacttctgcagctggtggacacaggccgt
gggggaggtggaggtggaaggatgcgctatcgtggcaacaactcgggctcaaataatccc
aacctgatgtaccaggatgaatgcgatcgccgcatgcgctctgtaactggaagtaacaag
ggcagccgcagcaacaacatgagccgtgacgcaaggccaggtgggagcaaccgcgacgac
cgcatgtcctcttcttacagagaccgcagcagggatggacgaaacaactacaactcagga
ccctcctacaacagtggaggaggtgaccaataccagagctgtgggggcggaggagggggg
cagtacggctccagagggggaagctcacatccaggtggggccggtggtggaggtgcagga
gggcaagatcaagctggacctccccaaggtctgtttggaccacctccaccaactcctcct
cagcctgggccaggtccacaacctctcatggcacagcagttccctcctccaccacagcct
atgatggggttcatgggtcctgggccatacccttttgcctcaccaccaccaccccttcct
cctcctcctcctagaaaatag
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