Puntigrus tetrazona (Sumatra barb): 122346848
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Entry
122346848 CDS
T08985
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
122346848
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptet01009
]
122346848
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptet04515
]
122346848
Protein phosphatases and associated proteins [BR:
ptet01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122346848
Cell adhesion molecules [BR:
ptet04515
]
Cadherins
Protocadherins
122346848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
MAP17
Cadherin_4
V_ATPase_I
UTP20_C
DUF6377
Herpes_glycop
Motif
Other DBs
NCBI-GeneID:
122346848
NCBI-ProteinID:
XP_043097636
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All DBs
Position
6:2148380..2390293
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AA seq
1238 aa
AA seq
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MDLRDFFLLATLVACFWLDPTIAQELIYPIREELQENVLIGNIPKDLNISHMNSATGATS
NLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVILPND
YFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL
LNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVT
VTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRR
LFALNSTTGLITVQRPLDREETAIHKLTVLASDGSSSPARATITINVTDVNDNAPNIDLR
YIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQYLL
ETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMEN
NQRDMFLTTITATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFLFT
VTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADA
GENAVVRLSILNDNENFILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKV
TINVIDVNDNTPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDGDTGMNAELKYTIVSGN
GRSLFRIDPVTGNITLEEKPTVADIGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTVGNS
SYIHDLIRRTMETPLDRNIGESSETYQNVDNLKTIIAIVTGAMVVIVVIFITVLVRCRHA
SQFKAAQRKKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEENKPDDSAHEPIN
GTISLPAELEEPGIGRFDWNATPTTTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKH
HVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKSKGAPLHTRQGTLTRTRT
ELNPDYLDLRSRAELNPEYWTPCTPLSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGPLL
SHPLPLVQAQDDFYEQASPDKRTEADGNSDPNSDGPLGPRGLVEATEMCTQECLVLGHSD
NCWMPPSLSSYPSPKSPVSSFNNQKEWAKERLLNGHTLTRSWKGERGSQEQFGDRKTFGS
SEGHFGSGGGGHMADIPLASLKSYQPASGPDSPKEQQL
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggatttaagggattttttcttgttggcaacattagttgcttgtttctggttagatccc
accatagcccaagagctcatttaccctatccgagaagagctacaggagaatgttcttatt
ggaaacataccaaaggacttgaacatctctcatatgaactctgccaccggcgctaccagt
aatctggtttaccgacttgtgtcgaaagcaggtgacacccctctacttagagtgatgagc
aatacaggagaaatctttaccacctccaaccgtatcgacagggagaagctctgtcccggc
ccctcttttgaagacagcgagtgctcttttgagattgaggtggtcattttgcccaatgac
tacttcagattaatcaaaattaaaatcattgtcaaagacaccaacgacaatgcccccatg
ttcccctcgcctgtgataaacatttcaattccggaaaacacactcatcaacagccgcttt
gctatcccctctgccaccgatccagataccggaccgaacagtgtgcacaaatatgaactg
ttgaacgggcagagcgccttcggtttggatattgtggagacaccagagggtgagaaatgg
cctcagctgatcgttcagcagaatttagatagagagcagaaagatacttatgtgatgaaa
gtcaaagtggaggatggggggaacccacaaaaatccagcactgccattctacaggtgacc
gtcactgatgttaatgataaccggcctgtcttcaaagaaagtcaaatcgaggttcacatc
ccggaaaattctcccgtcggcacatctgtagttcagctgcaagccactgatgcagacgtg
ggagccaatgcagaaataaaatacatgtttggggcccaggtgtctccagcgacacggaga
ctttttgctctgaactccaccactgggctaataacagttcaaaggccgcttgatagagag
gagactgccattcataaactcacagtgctagccagcgatggaagctcgagtccagcgaga
gccaccatcacaatcaacgtgacagatgtgaatgacaacgctccaaatattgacctgaga
tacatcatcagtccaactaatggtactgtaatgctttctgaaaaagatccaataaatacc
aagattgctctcattactgtatctgacaaagacacagatgtcaacggcaaggtgatttgc
ttcattgaaaaagatgttccatttcacctcaaagcagtttatgataaccaatacttgctg
gaaacatctgcgctgcttgattatgaaggaaccaaggagtacatcttcaagattgttgct
tctgactctggaaaacctagtctgaatcagactgccctggttagagtacggctggaggat
gagaatgacaatccacccattttcacccagcctgtcattgagctggctgtcatggagaac
aaccaacgtgacatgttcctgacaaccatcaccgccacagacgaggacagcggacggaat
gcagagattgtctaccagcttggacccaatgcatcattcttcgatcttgaccgcaaaaca
ggagtgctaaccgcatccagggtgtttgacagggaggaacaagaacggttcctctttacg
gtcaccgctagggacaatggcaccagggctctgcagagtcaagctgccgtcatagtgacc
atactggacgagaacgacaatagccctaaatttacacacaaccactttcagttctttgtg
tcagagaacctgcctaaatatagtacagttggagtaatcacagtcacagatgcagatgct
ggtgagaacgctgtggtgagactctcgatcctcaacgataacgagaacttcatccttgac
ccagattctggagtcataaagtccaacgtttcctttgaccgagagcagcagagctcctac
acttttgacgtcagagctgtggataacggaagcccgccatgttcatcagctgccaaagtg
accattaatgtcattgatgtcaacgataacacccccgtcgtcatttacccgccgtcaaac
acctctttcaagctagtgccgctgtctgcgattccaggatcagttgtggccgaggtgttt
gcagtcgatggcgatacgggtatgaatgcagaactcaaatacacaattgtgagcggtaat
ggtagaagtcttttcagaattgatcctgtaacgggaaacatcacgttagaggagaaaccc
acagttgcagatattggcctccataggctagtggtcaacatcagtgacctcggctatcca
aagtccctgcacactcttgtccttgttttcctgtatgtgaacgacacggtaggaaactcc
tcatacatacatgacctcatccgtcggacaatggaaacgccactggataggaacatcggc
gaaagcagtgagacttatcagaacgtcgacaacctcaaaaccatcattgccatcgtgaca
ggcgctatggtagtgatcgtggtcatcttcataacagttctggtgcgctgccgacacgcc
tcacagttcaaggcggcccagagaaagaagcagggtgccgagtggatgtcccccaaccag
gagaacaagcaaaacaagaagaagaagcgcaaaaagaggaagtcgccaaagagttccctc
ttgaactttgtcaccatcgaggagaacaaacccgatgactctgcccacgaacccataaac
ggaaccatcagtctcccggctgagctcgaggagcccgggattggacgctttgattggaat
gccacccctactaccaccttcaaacccagcagcccagacttggcccggcactacaagtcc
gcctcaccccagtcggctttccacctcaaagctgatactccggtgtctgtgaaaaagcat
catgtgatacaggagctgccactggacaatacctttgttgggggctgtgacacgctttcc
aaacgttcctccaccagctccgatcacttcagtgcctcagaatgcagttcacaaggaggc
ttcaagtcaaagggggcacctttgcacaccagacagggaacgcttacccgcacccgcacc
gaactgaaccccgactatctggaccttcgctcccgagccgagctgaacccagagtactgg
acgccctgcactcctctatcgcagcggcgcgtcacgtttcacctgccggacgggtctcag
gaaagctgcagtgacagtggtctgggggaccacgagcccgtgggcagtgggccgctcctc
tcacaccctcttcctctggtgcaggcgcaggacgacttctacgagcaggcctctccggac
aagaggactgaagcggacggcaactcggaccccaactccgatggacctctcgggccaaga
ggcttagtggaagccacagagatgtgcacccaagagtgtctggtgttgggccactccgac
aactgttggatgccaccgagcctgagctcgtacccctctcccaagtcccccgtttcctct
ttcaacaaccaaaaggagtgggctaaagagagactgctgaacggccacaccctgacccgc
agctggaagggtgagcgaggaagccaggagcagtttggggacaggaagaccttcgggagc
tcggagggacattttggcagcggcggtggcggtcacatggccgacatcccattggccagc
ctgaaatcttaccagcccgcctccggccccgacagtcctaaagaacagcagctttaa
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