Puntigrus tetrazona (Sumatra barb): 122346894
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Entry
122346894 CDS
T08985
Symbol
rhoca
Name
(RefSeq) ras homolog family member Ca
KO
K04513
Ras homolog gene family, member A
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04081
Hormone signaling
ptet04144
Endocytosis
ptet04150
mTOR signaling pathway
ptet04270
Vascular smooth muscle contraction
ptet04310
Wnt signaling pathway
ptet04350
TGF-beta signaling pathway
ptet04510
Focal adhesion
ptet04520
Adherens junction
ptet04530
Tight junction
ptet04621
NOD-like receptor signaling pathway
ptet04625
C-type lectin receptor signaling pathway
ptet04810
Regulation of actin cytoskeleton
ptet05100
Bacterial invasion of epithelial cells
ptet05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122346894 (rhoca)
04350 TGF-beta signaling pathway
122346894 (rhoca)
04150 mTOR signaling pathway
122346894 (rhoca)
09133 Signaling molecules and interaction
04081 Hormone signaling
122346894 (rhoca)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122346894 (rhoca)
09144 Cellular community - eukaryotes
04510 Focal adhesion
122346894 (rhoca)
04520 Adherens junction
122346894 (rhoca)
04530 Tight junction
122346894 (rhoca)
09142 Cell motility
04810 Regulation of actin cytoskeleton
122346894 (rhoca)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122346894 (rhoca)
04625 C-type lectin receptor signaling pathway
122346894 (rhoca)
09153 Circulatory system
04270 Vascular smooth muscle contraction
122346894 (rhoca)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122346894 (rhoca)
05100 Bacterial invasion of epithelial cells
122346894 (rhoca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122346894 (rhoca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptet04147
]
122346894 (rhoca)
04031 GTP-binding proteins [BR:
ptet04031
]
122346894 (rhoca)
Membrane trafficking [BR:
ptet04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
122346894 (rhoca)
Exosome [BR:
ptet04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122346894 (rhoca)
Exosomal proteins of other body fluids (saliva and urine)
122346894 (rhoca)
Exosomal proteins of colorectal cancer cells
122346894 (rhoca)
Exosomal proteins of bladder cancer cells
122346894 (rhoca)
GTP-binding proteins [BR:
ptet04031
]
Small (monomeric) G-proteins
Rho Family
RhoA/B/C [OT]
122346894 (rhoca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
SRPRB
VASP_tetra
Motif
Other DBs
NCBI-GeneID:
122346894
NCBI-ProteinID:
XP_043097703
LinkDB
All DBs
Position
6:complement(24178416..24191781)
Genome browser
AA seq
193 aa
AA seq
DB search
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDSKQVELALWDT
AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD
LRNDEHTRRELTKMKQEPVKPEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAALQ
VRKRKKRSGCLLL
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggcggctatcaggaaaaagctggtgatcgtgggagacggagcgtgtgggaagacctgt
ctcctcatagtgttcagcaaagaccagtttccagaagtctatgtgcctactgtgttcgag
aactacatcgcagacatcgaagtcgacagcaaacaggtggagttggcattgtgggacaca
gcaggacaggaagactacgatcgtctgaggcctctgtcctacccagacacagatgtcatc
ctcatgtgtttctccatagacagtcctgacagtttagaaaacatcccagaaaagtggacg
ccggaggtgaagcacttctgccccaacgttcccataatcctcgtgggcaataagaaggat
ctgcgcaacgatgagcacacacggagagagctgactaagatgaagcaggagccagttaaa
ccggaggagggcagggatatggccaaccgcattagcgccttcggctacctggaatgctca
gctaagactaaggagggcgtgagggaggtgttcgaaatggccaccagggcggcgctgcaa
gtccgcaagaggaagaagaggagcgggtgcttgctgttgtga
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