KEGG   Puntigrus tetrazona (Sumatra barb): 122346894
Entry
122346894         CDS       T08985                                 
Symbol
rhoca
Name
(RefSeq) ras homolog family member Ca
  KO
K04513  Ras homolog gene family, member A
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04081  Hormone signaling
ptet04144  Endocytosis
ptet04150  mTOR signaling pathway
ptet04270  Vascular smooth muscle contraction
ptet04310  Wnt signaling pathway
ptet04350  TGF-beta signaling pathway
ptet04510  Focal adhesion
ptet04520  Adherens junction
ptet04530  Tight junction
ptet04621  NOD-like receptor signaling pathway
ptet04625  C-type lectin receptor signaling pathway
ptet04810  Regulation of actin cytoskeleton
ptet05100  Bacterial invasion of epithelial cells
ptet05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    122346894 (rhoca)
   04350 TGF-beta signaling pathway
    122346894 (rhoca)
   04150 mTOR signaling pathway
    122346894 (rhoca)
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    122346894 (rhoca)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122346894 (rhoca)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    122346894 (rhoca)
   04520 Adherens junction
    122346894 (rhoca)
   04530 Tight junction
    122346894 (rhoca)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    122346894 (rhoca)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    122346894 (rhoca)
   04625 C-type lectin receptor signaling pathway
    122346894 (rhoca)
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    122346894 (rhoca)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    122346894 (rhoca)
   05100 Bacterial invasion of epithelial cells
    122346894 (rhoca)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ptet04131]
    122346894 (rhoca)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ptet04147]
    122346894 (rhoca)
   04031 GTP-binding proteins [BR:ptet04031]
    122346894 (rhoca)
Membrane trafficking [BR:ptet04131]
 Endocytosis
  Lipid raft mediated endocytosis
   RhoA-dependent endocytosis
    122346894 (rhoca)
Exosome [BR:ptet04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122346894 (rhoca)
  Exosomal proteins of other body fluids (saliva and urine)
   122346894 (rhoca)
  Exosomal proteins of colorectal cancer cells
   122346894 (rhoca)
  Exosomal proteins of bladder cancer cells
   122346894 (rhoca)
GTP-binding proteins [BR:ptet04031]
 Small (monomeric) G-proteins
  Rho Family
   RhoA/B/C [OT]
    122346894 (rhoca)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA SRPRB VASP_tetra
Other DBs
NCBI-GeneID: 122346894
NCBI-ProteinID: XP_043097703
LinkDB
Position
6:complement(24178416..24191781)
AA seq 193 aa
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDSKQVELALWDT
AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD
LRNDEHTRRELTKMKQEPVKPEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAALQ
VRKRKKRSGCLLL
NT seq 582 nt   +upstreamnt  +downstreamnt
atggcggctatcaggaaaaagctggtgatcgtgggagacggagcgtgtgggaagacctgt
ctcctcatagtgttcagcaaagaccagtttccagaagtctatgtgcctactgtgttcgag
aactacatcgcagacatcgaagtcgacagcaaacaggtggagttggcattgtgggacaca
gcaggacaggaagactacgatcgtctgaggcctctgtcctacccagacacagatgtcatc
ctcatgtgtttctccatagacagtcctgacagtttagaaaacatcccagaaaagtggacg
ccggaggtgaagcacttctgccccaacgttcccataatcctcgtgggcaataagaaggat
ctgcgcaacgatgagcacacacggagagagctgactaagatgaagcaggagccagttaaa
ccggaggagggcagggatatggccaaccgcattagcgccttcggctacctggaatgctca
gctaagactaaggagggcgtgagggaggtgttcgaaatggccaccagggcggcgctgcaa
gtccgcaagaggaagaagaggagcgggtgcttgctgttgtga

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