Puntigrus tetrazona (Sumatra barb): 122346953
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Entry
122346953 CDS
T08985
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptet04515
]
122346953
Cell adhesion molecules [BR:
ptet04515
]
Cadherins
Protocadherins
122346953
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
122346953
NCBI-ProteinID:
XP_043097851
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Position
1:14490784..14498314
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AA seq
943 aa
AA seq
DB search
MRGAFSGRVLWHWWTAHVALLSFLSTSAAGMTIKYQIYEEDALSTVIGNLATDTASNLSD
GSKTGFKMMNRFNASFIRLREKDGQLTIGERIDREKICKHTIRCLIAFDVVSVSNEKFRL
IHVEVEVKDINDHAPVFPRKECTLEISENAALGTRVPLDVAADEDVGSNYIQSYQISVNS
HFTIDVLSRADGVKYAELVLLKELDRETHASYVLELDATDGGNPPRSSSTKINIKVKDFN
DNSPVFDRNGFSVDVLEDAPVGFLLVDFNAVDPDEGLNGEVVYGFGNQVPSEIRQHFSVD
RKSGRLTLESPLDFESKKTYEFDVQASDLGPNPIPSVCKVVVQVQDVNDNAPEIAITPMT
SVTAGIAYITEAAAKESFVALVSISDKDSGANGDIHCTLYGHNHFKLQQAYEDSFMIVTT
SSLDREKISEYNLTVVAEDLGSPPFRTVKQYTIRLSDENDNAPVFSKPVFEVSLMENNAP
GAYITTLVARDLDLGQNSKITYKLMDDNIIGSPVSSFVSLDPSSGSLYALRTFNFEVLKQ
LQLRVQASDGGAPPLRSSAVVHLKIVDQNDNAPSITQPAPINGSAEVLLPKDAPSGSVIT
QVRARDADEGVNAELSFGISGAVASEFSINSATGEVHLNRELSRDFYENPRITVTVSDNG
RPSLTATVTIHFLIAASLPSGRRRNVFAHKTVEETQEGDHSLIIIVVLAGSCAFLFLAII
IIASTCNKRKADSRGHSGKEDGVQGKGNHIDPLISVHSDIVFDIHPYSSATTFPGLIQRG
SSEDSARVSEDGPRDPEDEGFSAVPSYGKDAMRQMKIWKGTSYATISAREPHSGKDSGVG
DSDYNDSDSDTSGDGLRKDEHQSSSQDGLWACTSECKILGHSDHCWSPTASRTDCSLTRS
FAKSGSPPQDALRRENYNQAHIPKTVGLQSVCEKVLRREYDYI
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagaggggcttttagcggtcgggttttgtggcattggtggacagcgcacgtcgcgtta
ctgtctttcctgtccacttcagcagcgggaatgaccatcaaatatcagatatacgaagag
gacgctctgtccactgtcatcggaaacctggcgacggacacggcctcgaatctgtcagat
ggctctaagaccggtttcaaaatgatgaatcggttcaatgcgtcttttattagactgcga
gaaaaagacggacagctaacgataggagaacgaatagacagagaaaaaatatgcaagcat
acgatccggtgtctcattgctttcgacgttgtgagtgtctcgaatgagaagtttagattg
attcacgtcgaagtggaagtgaaggacatcaacgaccacgctccggtgttccccaggaag
gagtgcacgctggagatctccgaaaatgcagcgctcggcactagagtccccttagacgtc
gccgcggacgaggacgtgggctccaactacatacagagctaccaaatatcagtgaacagc
cactttaccatcgacgtgctgagcagagctgatggggttaaatatgcagagttggtgctg
ctgaaagaattagacagggagacgcacgcctcctatgttttggagctcgatgcaacggac
ggaggaaatccaccgaggtccagcagcacgaaaatcaacatcaaagtaaaagacttcaat
gacaacagtcccgtgttcgaccggaacggtttttcggtcgatgtactggaggacgcaccg
gtgggattcttgctcgtggacttcaacgcggtggaccccgacgagggtttgaatggggag
gtcgtgtacggcttcgggaatcaagtgccttcggagatccgccagcatttcagcgttgac
cgaaaatccgggcggctgaccctcgagagcccgttagatttcgagagcaagaaaacctac
gagttcgatgtacaggcatccgacctgggtcctaacccgatcccgtccgtctgcaaagtg
gttgttcaagtgcaggacgtgaacgacaacgcaccggaaatcgcgatcacccccatgacc
tcagtcaccgcggggatagcgtacatcacggaggctgctgctaaagagagcttcgtggct
ctggtcagcatctcggacaaggactcgggcgctaacggagacatccactgtaccctctat
gggcacaatcacttcaaactccagcaggcctacgaggacagctttatgattgtaacgacg
tcttcgctggacagagaaaagatttcagagtataacctgactgttgtagccgaggacctg
ggatcgcctccgttcagaacagttaagcagtatactataagactgagtgatgagaacgac
aacgctcctgtgttcagcaaaccggtctttgaggtctccttgatggagaacaacgctccg
ggggcatacatcactactttggtggccagagaccttgacttggggcaaaatagcaaaatc
acctataagctcatggatgacaacatcataggctctccggtgtcgagcttcgtctctcta
gacccctcttctggctctctgtacgcgctcagaacttttaatttcgaggtcctcaaacag
ctgcagctgcgcgttcaagcgagcgacgggggcgcgccgccgctccgaagcagcgccgtc
gttcatcttaaaatagtcgatcagaacgacaacgctccgtccatcacgcagcccgcgccg
atcaacggttccgcggaggtcctgctgcccaaagacgcgccctcgggctccgttataacg
caggtgcgtgccagggacgccgacgaaggcgtcaacgcggaactgtcgttcggcatctcc
ggagctgtcgcctccgagttctccataaacagcgccaccggagaagttcatctgaatcgt
gaactcagccgcgacttttacgaaaacccgagaataacggtaaccgtcagcgacaacggg
agaccttccctgaccgcgacggtcacgatccacttcttgatagcggcgtctctcccgagt
ggacgcaggcgcaatgtgttcgcgcacaaaacagtcgaagagacccaggagggggatcac
tcgctcattataatagtcgtgctggcgggaagctgcgcgtttctgtttttagccattatc
ataatagcgtccacttgtaataagcggaaggcggacagtcgcggccattctggaaaggag
gacggcgttcagggcaagggaaaccacatcgacccgcttatttcggttcacagtgacatc
gttttcgatatccacccttactcgagcgccacgacttttcccggcttgatccagagaggc
agctctgaggacagcgcgcgcgtctctgaagatggcccgcgtgacccggaggacgagggg
ttttccgctgtgcctagctacggcaaagacgcgatgagacaaatgaaaatttggaaaggc
acctcgtacgcgaccatatcagctcgagagcctcacagcggaaaggacagcggggtcgga
gacagcgactacaacgacagcgattcagatacaagcggcgacggcttgaggaaagacgag
catcagagcagcagtcaggatggtctctgggcatgtacaagtgagtgtaagattttgggc
cactccgatcactgctggagcccgaccgcttccaggaccgactgcagtctaacacgctca
ttcgccaagtcaggttcacctccacaagacgctctcaggagagaaaactacaaccaagct
cacattccaaaaactgtgggactacagagcgtctgtgagaaagtattacgtagagaatac
gactatatataa
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