Puntigrus tetrazona (Sumatra barb): 122346968
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Entry
122346968 CDS
T08985
Symbol
scn8ab
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit b isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122346968 (scn8ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122346968 (scn8ab)
Ion channels [BR:
ptet04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122346968 (scn8ab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
IQ
ATP-synt_B
FraC
GPHH
Motif
Other DBs
NCBI-GeneID:
122346968
NCBI-ProteinID:
XP_043097834
LinkDB
All DBs
Position
6:complement(19342093..19390664)
Genome browser
AA seq
1957 aa
AA seq
DB search
MAAQLLAPPGPDSFKRFTPETLANIEKRIAEEKKKKPVKPRSDSSHRDDDDDNKPKPNTD
LEAGKSLPFIYGDVPSKMVAVPLEDLDPFYVNKKTFIVLNKGKTLFRFSATPSLYIISPF
SLFRQIAIKILIHSLFSMIIMCTILTNCVFMTFSNPPEWSKQVEYTFTGIYTFESLTKIV
ARGFCIDDFTFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLK
TIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVIWPFNQTESYLANGSR
GFDFNEYIMNDTNFYFLPGMLDALLCGNSSDAGRCPEGYTCMKAGRNPNYGYTSFDSFGW
AFLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQN
QATMEEAEQKEAEFKAMLEQLKKQQEEAQANAMATSAGTVSEDAVEDDGGGHLSRSSSEV
SKLSSKSAKERRNRKKKWRKEQEEKGDSEKVVKSESDDGSKRSRFRFRDNRLGRKASIMN
QSLLSIPGSPFMSRRSSIFSFKGSENEFADDEHSTVEESEDRRGSLFVPYRRSSYSGYSQ
GSSRINPLAPHPGCKRNSTVDCNGVVSLIGPGPGRLLPETTEVEGKRKHSGSLMVSVDQL
NTSFSRKERANSAMTVVTNTLVEELEESQRKCPPCWYKFANTFLIWECCPLWIKIKEIVN
LIVMDPFVDLAITICIVLNTVFMAMEHYPMTPHFEDVLSVGNLVFTGIFTAEMFAKLIAM
DPYYYFQEGWNIFDGFIVSLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKI
IGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAESCELPRWHMNDFFHSFL
IVFRVLCGEWIETMWDCMEVAGQSMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAA
TDDDGELNNLQISVIRIKKGIAWFKVHVRLLVAHVLKKKPLEDEDKPLDDMYDKKLNIIG
NHTGVDIKCDLNYPKNGNGTTSGIGSSVGKYMIDEEPMSFIHNPNLTVRVPIAVGESDFE
NLNTEDFSSESDVENSKDLDDTSSSEGSTIDIKPDEEEMAVVEVVEEYLDPEACWTDACV
ARYKCCDVPITEGWGKYWWFLRKTCYLIVEHNWFETLIIFMILLSSGALAFEDVYIEQRK
TIQIILEYADRVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIVSLIANALGY
SDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGV
NLFAGKYYYCFNETSEENFETDVVNNRSDCFALISMNHTEVRWKNVKINFDNVGAGYLAL
LQVATFKGWMDIMYAAVDSRKVEDQPIYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDN
FNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKIQGMVFDFVTQQAFDI
SIMMLICLNMVTMMVETDDQSEETENILYWINFIFIVAFTGEFVLKLFALRHYYFTNGWN
IFDCVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMM
SLPALFNIGLLLFLVMFIFSIFGMSNFAYVKREVGIDDMYNFETFGNSMICLFMITTSAG
WDGLLAPILNYPPDCNPEKENPGTTVKGDCGNPSVGIFFFVMYIIVSFLIVVNMYIAIIL
ENFSVATEESADPLCEDDFESFYEIWEKFDPDASQFITFAKLPDFADTLEHPLRVPKPNI
IELIAMDMPMVSGDRIHCLDILFAFTKRVLGDSGDLDMMRQQMEERFVAANPSKVSYEPI
TTTLRRKQEEVSAIIIQRAYRAHLARRGFICKRRPANNKLENGGTNQEKKEGTPSTASLP
SYDSVTKPEKEKQDDNNEGKGRKEKGRNQKDVRESKC
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcagctgctcgcacctccaggccccgatagcttcaagaggttcaccccagag
actttggccaacatcgagaagcgtatcgctgaggagaagaagaagaagcctgttaagccc
agatctgacagcagtcaccgcgatgacgatgatgacaacaaaccgaagcccaacactgac
ttggaagcggggaagagcctgccctttatttacggggacgtcccttctaaaatggtggct
gtgcccctggaggacttggaccccttctatgtgaacaagaaaacctttatagtgcttaac
aaaggaaaaactctcttccgtttcagtgccacgccctcgttatatatcattagtcctttt
agcctattcaggcaaatagcaattaaaattttgatacactcacttttcagcatgatcatc
atgtgtacaattttgacaaactgtgtcttcatgacattcagcaatcccccagaatggtcc
aaacaagtagaatacaccttcacaggcatctacactttcgagtctctcacaaagattgtg
gctcgaggtttctgtatagacgacttcacctttctcagagacccttggaactggctggat
ttcatggtcatctctatggcatatgtaacagagtttgtggacctcgggaatgtgtcagcc
ctgagaaccttcagggttctacgagctctcaaaactatttctgtcataccagggctgaaa
accattgtgggtgctctgatccagtcagtgaagaagctgtcagatgtgatgattctgact
gtcttctgtctgagtgtatttgccctcatcggtctacagttgttcatgggtaatcttcgg
caaaagtgtgtcatctggccattcaatcaaactgaatcctacctggccaatggtagcaga
ggctttgacttcaatgaatacatcatgaatgacacaaacttctactttctgccaggcatg
ctggatgcgctgctatgtggaaacagctcagatgcgggacggtgtccggaaggctatact
tgcatgaaggctggacgcaacccaaactacggctacactagttttgactcatttggttgg
gcttttcttgctctcttccgactcatgacacaagacttctgggagaatctgtaccaactg
actctacgagctgctgggaagacgtatatgatcttctttgtactggtgatctttgtggga
tcgttctacctggtgaatctgatcctggctgtggtggccatggcttatgaagaacagaac
caggccaccatggaggaggcagaacagaaggaggctgagtttaaagctatgctggaacag
ctgaaaaaacaacaggaagaggcacaggctaatgccatggcaacctcggcaggaacagta
tctgaggatgcagtagaggacgatggaggagggcatctgtcccgcagttcctctgaggtg
tccaagctgagctccaagagcgccaaggagcgaagaaacagaaagaaaaagtggaggaaa
gaacaggaggagaagggtgacagcgagaaggtggtaaagtcagaatctgatgatggcagc
aagagaagccgctttcgtttcagagacaacaggcttgggcggaaggcctcaatcatgaac
cagtccctgttgagcatccccggctctcccttcatgtcccgccgcagcagtatattcagc
ttcaagggctcggagaacgagttcgcagacgatgagcacagcacggtcgaggagagcgaa
gaccgccgcggctccctctttgtcccgtacagacgcagcagctacagcggctacagccag
ggttcctcacgcattaacccgctggcaccccacccaggctgcaagagaaacagcacagtg
gactgcaacggcgtggtgtctctgatcgggcctgggcctggccgactactgcctgagacc
acagaggtggagggaaagagaaagcactcaggttctcttatggtgtcggtggaccagctc
aatacttcctttagccggaaggagcgagccaacagtgcaatgactgtcgtcaccaacaca
ctggtggaagagctagaggagtctcagagaaaatgtccgccctgctggtataagtttgcc
aacacattcttgatatgggagtgctgtccactctggataaagataaaagagatagtaaac
ctcatagtgatggatccatttgtagatctggctatcactatatgtattgttctgaacaca
gtcttcatggccatggagcattatcccatgacaccacactttgaggatgtgctttctgtt
ggaaacctggtgttcacaggtatcttcacagctgaaatgtttgccaagttgatagctatg
gatccgtactactactttcaggagggctggaatatctttgatggcttcattgtgagcctg
agtttggtggagctggggctggctgatgtagaggggctgtctgtgctcagatccttcaga
ttgctgagggtgtttaaactggccaaatcatggcccactctgaacatgctgatcaagatc
attggtaactctgtgggagctttaggaaacctgaccctggtgctggccatcatcgtcttc
atctttgctgtggtgggcatgcagctgtttgggaagagctataaagactgtgtgtgtaag
atcgcagagagctgcgaactgccccgctggcatatgaacgactttttccactccttcctc
attgtgttccgggtgctgtgtggagaatggattgaaaccatgtgggactgtatggaggtg
gctggacaatcaatgtgtctcattgtattcatgatggtgatggtcattggaaacttggtg
gtgctgaacctgttcttggccttgctgctcagctccttcagtgctgataatctggcagcc
acagatgatgacggtgagctgaacaacctgcagatttcagtgatccgcattaagaagggt
atcgcttggttcaaagttcacgtacgtctcctggtggcccacgtcttgaagaagaaacct
ttggaagatgaagacaaacctcttgatgacatgtatgacaaaaaactcaacatcataggt
aaccacactggtgttgacatcaaatgtgatctgaactaccctaagaacggtaatggcacc
acaagcggcattggtagcagcgtaggaaagtacatgattgatgaggagcccatgtccttc
atacacaaccccaatctaacggtacgggttcccatcgctgtgggagagtcagactttgag
aacctcaacactgaggacttcagcagtgagtcggatgtggaaaatagcaaagatctggat
gacaccagctcttcagagggaagcactatcgacataaagcctgatgaggaggaaatggct
gtggtagaggtcgtggaggagtacttagacccagaggcctgctggactgatgcctgtgtg
gcacgatacaaatgctgtgacgtgcctatcaccgagggctggggaaagtactggtggttc
ctgaggaaaacttgctacctcatcgttgaacacaactggtttgagacactcatcattttc
atgattctgctcagctctggagctttggcatttgaggatgtatacattgaacagaggaaa
accatccagatcattctagaatatgctgacagagtcttcacatacatcttcatcttggaa
atgttgctgaaatgggtagcctatggctttgtcaaatacttcaccaatgcatggtgctgg
ctggacttcttcattgtggatgtgtctatagtcagccttatagctaatgcgctgggctac
tcagacttgggccccataaagtccctgaggactttgagggctctcaggcccctgagagct
ttgtcccggtttgagggcatgagggttgtcgtgaatgctttggtgggtgccattccctcc
attatgaatgtgctgttggtgtgtttgatcttctggctgatcttcagtattatgggtgtc
aacctgtttgctgggaagtactattactgcttcaatgagacatcggaggagaattttgaa
actgacgttgtcaacaacaggtcagattgctttgcactcatcagtatgaaccacacagag
gttcgctggaagaatgtgaagatcaacttcgataatgtgggtgctggttacctggctctc
ttgcaagtggccacattcaaaggctggatggacatcatgtatgctgctgtggattccaga
aaggttgaggaccagcccatctacgaggacaacatctacatgtatatatattttgtcatc
ttcataatctttgggtccttcttcactttgaatctcttcattggtgtcattattgacaac
tttaaccaacagaagaaaaagtttggaggtcaagatatcttcatgactgaagaacagaaa
aagtactacaatgctatgaagaaactgggctcaaagaaaccacagaaacccatccctaga
ccactgaacaaaatccaggggatggtatttgactttgtcactcagcaggcctttgacatt
tccatcatgatgctcatctgtcttaacatggtaactatgatggtggaaacagatgatcag
tcagaagagacagagaacattttgtactggataaacttcatattcattgtggccttcact
ggcgagtttgtcctaaaactctttgctctccgacactactatttcactaatggttggaac
atctttgactgcgttgtcgtcattctgtccattgtgggtatgttcctggcagaccttatt
gagaagtactttgtgtcaccaactttgttcagggtcatccgtctggctcgaatcggtcgt
attctgcgtctaatcaaaggagccaagggcatccggacattactgttcgctttgatgatg
tcacttcctgcactgttcaacattggcctgttgctgttcctggtcatgttcatcttctcc
atctttggcatgtctaattttgcctacgtgaaacgagaagtaggaattgatgacatgtac
aattttgaaacttttggcaacagcatgatctgtctattcatgatcaccacatcagctggt
tgggatggcctcttggctcctatcttgaactatccacctgactgcaaccccgagaaggag
aacccaggtaccacagtcaagggcgactgtggcaatccctcagtgggaatcttcttcttc
gtgatgtacatcattgtgtccttcctgattgtggtgaacatgtacatcgctatcatcttg
gagaacttcagcgttgctaccgaggagagcgctgacccactgtgcgaagacgactttgag
tccttctatgaaatctgggagaagttcgacccagatgcttcgcagttcatcaccttcgcc
aagctgccagactttgcagatacattagaacatcctctccgtgtgccaaagccaaacatt
atcgagctgatcgccatggacatgcccatggtgagtggcgaccgcattcactgcttggat
attctgttcgccttcaccaagcgtgtgctcggcgacagtggcgacctggacatgatgcgc
cagcaaatggaggaacgtttcgtggcagcgaatccctccaaggtgtcatacgagcccatc
actaccacgctgcggcgtaagcaggaggaggtgtcagccatcatcatccagagggcgtac
cgagcccatctggcacgcagaggcttcatctgcaaacgcaggcctgccaacaacaaactg
gagaacggagggaccaatcaggagaagaaagagggcacgccttccactgcatccctgccg
tcttatgacagtgtcaccaagcccgagaaggagaaacaggacgacaacaacgaaggcaag
ggccgcaaggagaagggccgaaaccaaaaagacgtcagggaatccaagtgttaa
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integrated database retrieval system
