Puntigrus tetrazona (Sumatra barb): 122347029
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Entry
122347029 CDS
T08985
Name
(RefSeq) pre-mRNA-splicing factor 18 isoform X1
KO
K12817
pre-mRNA-splicing factor 18
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122347029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptet03041
]
122347029
Spliceosome [BR:
ptet03041
]
Complex C
Other components
Step II factors
122347029
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
CelTOS
Motif
Other DBs
NCBI-GeneID:
122347029
NCBI-ProteinID:
XP_043097944
LinkDB
All DBs
Position
6:21796444..21801055
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AA seq
351 aa
AA seq
DB search
MDILKAEIARKRKLLEEKELVDDSKKYFKRADLARKEEEDYYRRCGYKVSNEQPVRQLDK
TEEEAPPSASSNPVLELELTEEKLPMTLSRQEVIRRLRERGEPVRLFGESDYDAFQRLRK
IEILAPEVNKGLRNDLKAAMDKIDQQYLNEIVGGTEGAEVDTQHDLKVHEENTTIEELEA
LGASLGTGNDVRDMDVINKVLRFLLGVWAKDLNSREDHVKRSVQGKLASATQKQTESYLE
PLFRKLRKKNLPADIKESITDIIKFMLEREYVKANDAYLQMAIGNAPWPIGVTMVGIHAR
TGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggacatcctcaaagcagagatcgcgaggaaaagaaaactccttgaggagaaagagctc
gtggatgactcaaagaagtacttcaaacgggctgatctcgcacgtaaggaagaggaggat
tattacagaagatgtggatacaaggtttctaatgagcagcctgtgagacagctggacaag
acggaggaagaggcgcctccttccgcatcgtccaatcccgtgttagagctggagctcacg
gaggagaagctgccgatgacgctctctcgacaggaggtgatcagacgtctgagggaacgc
ggcgagcccgtccgtctgtttggggaatccgattacgacgctttccagagactccgaaag
atagaaattctagcaccggaagtaaacaagggtctgaggaatgatctaaaggctgccatg
gataagatcgatcagcagtatctgaatgagattgtcggaggaacagagggcgctgaagtg
gacacgcagcacgatctcaaagtgcatgaagaaaacaccaccatcgaggagcttgaggct
ttgggagcatctctcggcactggcaatgacgttagagacatggacgtcataaacaaagtt
ttaaggtttctgctgggcgtgtgggctaaagatctgaacagccgagaggaccacgtgaag
cgtagcgtccagggcaaactcgccagtgccacccagaaacagactgaatcctatttggaa
cctctgttcagaaaactgcgtaagaagaatttgccagcggatattaaggagtccatcaca
gacatcataaagttcatgctggagcgggaatacgttaaggcaaacgatgcttatctgcag
atggctataggaaacgctccgtggcccatcggtgtgaccatggtgggtatccacgctcgt
actggacgtgagaagatcttctccaaacacgtcgcccatgtgctcaacgacgaaacccag
aggaaatacattcaggggctgaaaagattaatgacgatctgtcagaaacatttcccgaca
gatccctcaaagtgtgtggagtataacgctctgtga
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