Puntigrus tetrazona (Sumatra barb): 122347122
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Entry
122347122 CDS
T08985
Symbol
srsf3a
Name
(RefSeq) serine/arginine-rich splicing factor 3a isoform X1
KO
K12892
serine/arginine-rich splicing factor 3
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03040
Spliceosome
ptet05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122347122 (srsf3a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122347122 (srsf3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptet03041
]
122347122 (srsf3a)
Spliceosome [BR:
ptet03041
]
Common components
Common spliceosomal components
SR proteins
122347122 (srsf3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Extensin_2
Motif
Other DBs
NCBI-GeneID:
122347122
NCBI-ProteinID:
XP_043098108
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All DBs
Position
6:complement(20096024..20102459)
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AA seq
204 aa
AA seq
DB search
MCQCLFSLECTDLLFGMGQSESFFFRCAAEFGIGEDMGDPSLSRDCPLDCKVYVGNLGNS
GNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRTLCGCRVRVEM
SSGEKRSRYRGPPPSWNRRPRDDYRRRSPPPRRRSPKRRSFSRSRSRSLSRERRRERSLS
RDRNYKPSRSFSRSRSRSRSNGRK
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcagtgtcttttttcgctcgaatgcacggacctgctttttggcatgggacaaagc
gagagctttttttttaggtgtgcagctgagtttgggattggtgaagatatgggagaccct
tccctaagccgggactgcccgcttgattgtaaagtctatgttggcaatttgggcaacagt
ggtaataaaactgagttggagagagcatttggatattatggtcccctgaggagtgtatgg
gtggcaagaaatcctcccggctttgcttttgtggagtttgaggaccccagagatgcaact
gatgctgttagggaacttgatggaagaacactgtgtggttgtcgagtgcgagttgaaatg
tccagcggtgaaaaacggtcaaggtatcgaggaccacccccttcttggaatcgccgccca
cgcgatgattatagacgccgcagcccaccccctagacgccggtctcctaagaggcggagc
tttagtcgtagtcgaagcaggtccctttccagagagaggagaagagagaggtctttgtcc
cgcgatagaaactataaaccttcaaggtccttctcaagatcacgcagtcgctcacgttcc
aatggtcggaagtga
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