Puntigrus tetrazona (Sumatra barb): 122347253
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Entry
122347253 CDS
T08985
Symbol
sox21a
Name
(RefSeq) transcription factor Sox-21-A
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122347253 (sox21a)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122347253 (sox21a)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122347253
NCBI-ProteinID:
XP_043098370
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Position
6:3515023..3516140
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AA seq
230 aa
AA seq
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MAKPMDHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDE
AKRLRAVHMKEHPDYKYRPRRKPKNLIKKDRYHFNVTYNLGDSDPLKTDSMSAEKTSVAA
ATRVFFSHHLSTNPYPFLDLTSKMSELPPAPFPHYSMLGYPGGVSAFPGIPGVLAGAPHA
HPSAGNPGHMVPYNCLGWPGSGPAVPSSYVLLPGMTKAQHEPYLTYAATI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcccatggaccacgtcaaacgccccatgaacgcttttatggtgtggtcgaga
gcccagagacggaaaatggcactggacaacccaaagatgcataactcggagatcagcaag
cgcctcgggggcgaatggaaactcctgtcagactctgaaaaaagaccttttatagacgag
gccaagcgcctcagagccgttcacatgaaggaacacccggattacaaatacagaccgcgg
cgaaagcccaaaaacctgatcaaaaaagacaggtatcattttaatgtgacgtacaacctg
ggtgacagtgacccgctgaaaacggactcaatgagcgccgagaaaacgtctgtggccgcc
gccactcgggtgtttttcagtcaccacctgtccaccaatccctatccgtttctcgacctg
acctccaaaatgtcggaattaccccccgcgcctttcccgcattactcaatgctcgggtat
cccggtggagtctccgcgtttcccggcattcccggggttctggccggcgcgccgcacgct
cacccgtccgcgggtaacccgggccacatggtgccctataactgcctgggctggccggga
tctggacccgctgttccttcttcgtacgtgctcttaccgggaatgaccaaagctcagcac
gaaccttatctgacttacgctgcgacgatatga
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