Puntigrus tetrazona (Sumatra barb): 122347399
Help
Entry
122347399 CDS
T08985
Symbol
dync1i2b
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04145
Phagosome
ptet04814
Motor proteins
ptet05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122347399 (dync1i2b)
09142 Cell motility
04814 Motor proteins
122347399 (dync1i2b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122347399 (dync1i2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122347399 (dync1i2b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ptet04812
]
122347399 (dync1i2b)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
122347399 (dync1i2b)
Cytoskeleton proteins [BR:
ptet04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
122347399 (dync1i2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Dynein_IC2
WD40
WDR55
Beta-prop_EML
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
EIF3I
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
122347399
NCBI-ProteinID:
XP_043098561
LinkDB
All DBs
Position
6:1736687..1753797
Genome browser
AA seq
645 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKELDGRKEGASPPQDDSDLERKRREA
EALLQSMGIVDASMVQPLRVVTEDTCLFHYLVPPPMSPSAKSVGTPSETGSQDSGDGGTG
PRTLHWDSDPSTLLLHSDSQLGRGPLKLGMSKVTQVDFPPKEMVSYSKETQTPTQTHHKD
DEEEEEDLAVTQPALENQEEKDSQKEEEEAPPHELTEEEKQQILHSEEFVTFFDHSSRIM
ERALSEQVDVFFDYSGRDLQEKEGESQAGAKLSLNRQFADERWSKHRVVTCLDWSPQYPE
LLVASYSSNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSAAFAQFHPNLVVGGTY
SGQIVLWDNRSNKRTPVQRTPLSASAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWSLD
MLSTPQDSLELVFKQSKSVAVTSMSFPLGDVNNFVVGSEDGSVYTACRHGSKAGISEMFE
GHHGPITGLDCHTAAGPVDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDIMWS
PTHPALFACVDGVGHLDLWNLNNETEVPTASVTVEGSPALNRVRWAQSGREVAVGDSEGQ
VHIYDVGEQISVPRQDEWTRFALTLTEINENREDVEELAAQRLAA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgagctgaaggcagagttagagagaaagaaacaacgactggctcag
atcagagaggagaagaagaggaaagaggaagagcgcaagaagaaagagttggacggacgg
aaggagggagcgtctcctccgcaggatgactctgatctggagaggaagaggagggaggca
gaggctctgctgcagagcatggggatagtggacgcctccatggtgcaacctctgcgtgtg
gtaacagaggatacgtgtctgtttcactatttagtcccccctcccatgtccccttctgcc
aaatcagtgggcacaccgagcgaaacgggcagccaggactcaggggacggcggcacgggg
ccgaggactcttcattgggactctgacccttctactctactgctccattcagactctcag
ctcggacgtggcccgttgaaactgggcatgtcaaaggtcacacaggtggacttcccgcca
aaagagatggtgtcgtactcaaaagagacacagacgcccacacagactcatcacaaagat
gatgaggaggaggaggaagatttggcggtgacccaacctgctctggagaatcaagaggag
aaagactctcagaaagaggaagaagaagcgccccctcatgagctgacagaggaagagaag
cagcagattcttcactcggaggagttcgtgactttctttgaccacagctctcgtatcatg
gagcgcgctctctctgagcaggtggacgtgtttttcgactacagcggacgagaccttcag
gaaaaagagggagagtctcaggccggagccaaactctccctgaacagacagtttgcggac
gagcgctggtccaagcacagagtggtcacgtgtctggactggtcgccgcagtaccctgag
ctgctggtggcgtcgtacagcagtaatgaagacgctccacatgagcccgacggtgtggct
ctcgtctggaacatgaagtataagaaaaccacaccggaatatgtcttccactgccagtct
gcggtgatgtcagcagcctttgctcagtttcatcctaacctggtggttggaggcacgtac
tcggggcagatcgtcctgtgggacaaccgcagtaacaaacgcaccccagtgcagaggacg
cctctctccgcctcggctcacacgcacccggtgtactgcgtgaatgtggtggggacgcag
aacgctcacaatctcatcagcatctccaccgacggcaagatgtgctcctggagcctggac
atgctctccactccacaggacagtctggagctcgtgttcaaacagtccaagtcagtagcc
gtcacctccatgtcatttcctctgggagacgtcaataactttgtggtgggcagcgaggac
ggctccgtctacaccgcctgcagacacgggagtaaagcgggtatcagtgagatgtttgag
ggtcatcatggaccaatcacaggcctcgactgccacacagcagcaggaccggtcgacttc
tctcacctgtttgtcacgtcctcctttgactggaccgtcaaactctggagcaccaagaac
aataagcccttgtactctttcgaggataattcagattacgtgtatgacatcatgtggtct
cccacacaccccgctctgttcgcctgcgtggacggggtcggacacttggacctgtggaac
ctcaacaacgaaaccgaggttcccacggcgagcgtgacggtggagggaagccccgctctg
aaccgagtgcgctgggctcagtcgggacgagaggtggccgtcggagactccgagggtcag
gtgcacatttacgacgtcggagagcaaatctcagtgccgcggcaggacgagtggactcgc
tttgcgctcacgctgaccgagatcaacgagaaccgcgaggacgtggaggaactggccgct
cagcgactggctgcatga
DBGET
integrated database retrieval system
