Puntigrus tetrazona (Sumatra barb): 122347425
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Entry
122347425 CDS
T08985
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122347425 (rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122347425 (rae1)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122347425 (rae1)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122347425 (rae1)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122347425 (rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
122347425
NCBI-ProteinID:
XP_043098612
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Position
6:8482920..8489469
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AA seq
369 aa
AA seq
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MSLFGANTGFGSGGTGVFGSTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQT
IQIAQHEGPIRTIHWIKAPNYSCVMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQSKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTATPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNNNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtttattcggggcgaacacgggctttggctccgggggaacgggtgtatttggtagc
accaccacagacagtcataatcccatgaaggatgttgaagtaacatcgccccccgatgac
agcataagctgcttggccttcagtccccccacgatgccggggaactttctgatcggaggc
tcgtgggccaatgacgtgcggtgctgggaggttcaggataatggtcagactgtccctaaa
gcccagcagatgcacacaggcccagtgcttgatgtgtgctggagtgatgatggcagtaaa
gtctttacagcctcctgtgacaaaaccgctaagatgtgggatctgaacagcaatcagacg
attcagatagcacaacacgaaggtccaatcaggacaattcattggattaaagcaccaaac
tacagctgtgttatgactggcagctgggacaaaacgctgaagttttgggatacacgatcc
ccaaaccctatgatgtccctgcagatgccagagaggtgttactgtgcagatgtggtctat
cctatggctgttgtggccactgcagaacgtggtcttattgtttaccagttggaaaatcaa
ccttcagagtttcgacgtatagagtcacctctgaagcatcagcaccgctgtgtggccatc
tttaaggacaagcagagtaaacccactggttttgcactgggcagcatcgagggacgagtt
gccattcattacataaacccccctaatccagccaaggacaatttcacctttaagtgccac
aggtctaatggaaccaatactgccacaccccaagatatttatgctgtgaatgctatttcc
tttcacccggtccacggcactctggcgacagtagggtctgatgggcgcttcagtttctgg
gataaagatgcccgcaccaagctgaagacctctgaacagttagatcaaccaataactgct
tgttgcttcaataacaatgggaacatatttgcctatgcttccagctatgactggtctaag
ggacatgaatattacaatccccagaaaaagaattacatcttcttgaggaatgcagctgag
gaactgaagcctcggaacaagaaatggtga
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