Puntigrus tetrazona (Sumatra barb): 122347476
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Entry
122347476 CDS
T08985
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122347476 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptet03041
]
122347476 (prpf38a)
Spliceosome [BR:
ptet03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
122347476 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
122347476 (prpf38a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
122347476
NCBI-ProteinID:
XP_043098726
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All DBs
Position
6:complement(16281389..16284146)
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AA seq
313 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHAERVCDIILPRLQKRQVLEEAELLDAR
ISALEEDLDEVETSDEEDEEEEKPERVQTPEPHRRSYRDMDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRDRDRDRHRSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKSPESR
SKKSHKRSRRGNE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggctaataggacggtaaaagatgccaatagcatacatggaacaaaccctcagtatctt
gtcgagaagattatacgaacacgtatttatgagtccaagtactggaaagaggagtgtttt
ggacttacagctgaactcgtcgtggacaaagcgatggagctgaagtttgttggtggtgta
tatggaggaaacatcaagcctactccattcttatgtctgaccctaaagatgctgcagatc
cagcccgaaaaggacattattgtggaattcatcaagaatgaagacttcaagtacgtccgt
ttgcttggagctatgtatatgcgcctgaccggaacttctgtagattgctacaagtattta
gaaccgttatataatgactacagaaaaattaaaagccagaacagaaatggagagtttgag
ttgatgcatgtcgatgagtttatagatgagttgcttcatgcagagagagtgtgtgacatc
atcctccctagacttcagaagagacaggtcttggaggaagctgagctgctggatgctcgt
attagtgctctggaagaagatctggatgaagtggaaaccagtgatgaggaggatgaggaa
gaagagaagccagagagagtgcaaacaccagagccacacagaagaagttacagagatatg
gaccgaccacgcaggtctccttctcctcgctacagacgcagccgctcacccaggagacga
agcaggtcacctaaaaggcgaagtccatcacccaggcgggatcgggatcgggatcgtcac
cgcagcaaaagtccccgcagacaccgcagcagatccagggacagaaggcatcgctccaaa
tctccaggtcaccacagaagtcaccggcatcgcagtcactccaagtccccagaaagtcgg
tcaaagaagagtcacaaaagaagtcgaagaggaaatgagtga
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