Puntigrus tetrazona (Sumatra barb): 122347833
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Entry
122347833 CDS
T08985
Symbol
herc3
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122347833 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122347833 (herc3)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122347833 (herc3)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
HECT type E3
122347833 (herc3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
122347833
NCBI-ProteinID:
XP_043099043
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All DBs
Position
1:24718573..24743566
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AA seq
1046 aa
AA seq
DB search
MMLCWGSSASGQLGVGASEALVFEPRSCCMFDGRGLKEVACGSQHSLFLLHDGSVYACGS
NSCGQLGHDKGGWRPELVGALDAQKIAGVSCGQTHSLAVNEQGQVFAWGAGEGGQLGLGT
AEEAVRVPRLIKKLCEHRISQVMCGNQHCIALSKDGQLFVWGENSSGQLGLGKGEPSTRS
PQPLKSLCGIPLAQISAGGDHSFALSLSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLR
SQKVVYISCGDEHTAALTKEGGLFTFGNGSRGQLGHDSTRNEPLPRRVMELMGTEVSQIA
CGRHHTLAFVPSTGLVYAFGCNTQGQLGTGLRGNAKSPLPVRNIQPLCFGNTHTKGERYT
ICKIHSGGDHNFLLLSTKEGSSCSEDFRIXEYHKSIALINSESLDSWRMKLHDNGDTSIA
NDIILLFSSTACWNASFLDQSDDGHFKTNPKVPGIDFNAVRLLFETLMKPAFARLLDQAT
KSFESLLIPQLPCSPPDVEAMRIYLILSECPALQDSKNYISLTIPLAMAILRLDANPSKV
LDNWWSLMDCEVFSRLVEMYKSIVVFLLTGGKALLMPVFLESYTSAALRLLEKLHKVNLK
AHRVEYNHFYIPDIATLVDIQEDYLKWFLRKADIKMRYPPVQGSVTLCAYPFILNAQAKT
TVLQTDAELQMQMAVSGANLHNVFMLLTMEPLLARNPFLVLHVRRNHLVSDALRELTVYN
DVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPIYGMFSQYSESNLLWFSDKCFV
EHNWFHLIGIICGLAIYNSTVVDLHFPLVLYKKLLNVLPSLDDLKELSPTEGRSLQQLLE
YDGDVEETFCLNFAITREYYGITEVKELVQGGKTIAVDRTNRKEFVQAYLQYVFSDAVQE
QYSAFSSGFLKVCGGEILSLFQPSELMAMVVGNNNYNWEEMEKNASYKGEFSASHPTVKM
FWEVFHEFPLEKKKQFLLFLTGSDRIPIHGMASLRIVIQSTAAEEHYLPVAHTCYNMLDM
PCYQTKETLRHRLTQAVEQYEGFSLV
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgctggggaagcagtgcctcgggtcagctgggcgtcggggcgtcggaggcg
ttggtcttcgagccgaggagctgttgcatgttcgacgggaggggtcttaaagaagttgcg
tgcggcagccaacactcgctcttcctgttgcatgatgggagcgtttacgcctgtggctcc
aacagctgcggtcagctgggccatgacaagggaggatggaggccagagctggtaggagct
ctggatgcccagaagatcgccggtgtttcgtgcgggcagactcactctctggcggtaaac
gagcaggggcaggtgtttgcctggggggccggagaaggagggcagctcggtctgggtacg
gctgaagaggcggtccgcgtgcccaggttgattaaaaagttgtgcgagcatcgaatctca
caagtaatgtgtggcaaccaacactgcatagcactttcaaaagatggtcagctgttcgtg
tggggtgagaactccagcggtcagctgggtttagggaagggagagccgagcacccggtct
cctcagccgctcaaatctctgtgtgggatcccgctggctcagatcagcgctggaggagac
cacagcttcgccctgtccctgtccggagccgtgttcggctgggggaagaacagcgccggg
cagctgggcctcaatgacgagcaggaccgggctgttccctgtcacatcaagttcctgcgg
tcgcagaaggtggtgtacatcagctgcggagatgagcacaccgctgccctgacaaaggaa
gggggtctgttcacatttggaaacggttcaagaggacagctgggccacgattccaccaga
aacgagcctcttccacgcagagttatggagctcatgggcaccgaggtgtctcagatcgct
tgtgggcggcaccacaccctggcattcgttccctccactggtctggtttacgctttcggc
tgcaacactcagggccagctgggtacaggcctcagaggaaatgctaagagcccacttcct
gtcaggaacatccagcccctgtgctttggaaatacacacacaaaaggcgagcgctacacc
atctgtaaaattcacagtggaggcgatcacaatttcctgttgttgtctactaaggagggt
tcatcttgttccgaggatttccgcattnatgaataccacaaaagcatcgctctgattaat
tctgagagtctggacagctggaggatgaagctccatgacaacggcgatacaagcatcgcc
aatgacatcatactcctgttttcctcaactgcatgttggaatgccagctttttggaccaa
agtgatgatggacatttcaaaaccaaccccaaagtcccgggcattgattttaatgccgtc
aggctgctttttgagacgctgatgaaaccagccttcgcaaggcttttggatcaggccaca
aagagctttgagagtctcctgatcccccagctgccctgctctcctcctgatgtggaagcc
atgcggatctacctgatcctgtctgaatgtcccgctctccaggactccaagaactacatc
tctctcaccatccctctagccatggccatcctcagactggacgccaaccccagcaaagtt
ctcgataactggtggtctctaatggattgcgaggttttctctagactcgtggagatgtac
aaaagcatagttgtgtttctgttgaccggcgggaaggcgctcctgatgcctgtgtttctg
gagagctacacaagcgccgccctgcgactgctggagaagctacacaaggtcaatctgaaa
gcccatcgtgtggaatacaaccacttctacatccctgacatcgccaccctggtggacatc
caggaagactacctcaaatggtttctgcgcaaagctgatattaaaatgcgataccctcca
gtgcagggttctgtcacgttatgtgcctatccgttcatattgaacgcgcaagccaagaca
accgtgctgcaaacagatgctgagctgcaaatgcagatggcggtaagcggcgctaacttg
cacaacgtcttcatgctgttgactatggaacctttgctggcaagaaaccctttcctggtg
cttcacgtacgaaggaaccacttagtcagcgatgctctccgggagctcaccgtctacaat
gacgtagacttgaagaagccgcttaaggtcatttttgatggagaggaagctgtggatgct
ggaggagtcactaaggagttcttcctgctcctgctgaaagagctgatggatcctatctat
ggcatgttctcccagtattcagagtccaatctgctgtggttctctgataaatgttttgtg
gagcacaattggttccacctgatcgggatcatctgtggtttggccatctataactccact
gtggtggacctgcactttcctctggtgctctacaagaagcttctgaacgttttgccctca
ctggatgacctgaaagagctttctcctacagagggaaggagtcttcagcagctgctggag
tatgacggagatgtggaggagaccttctgtctgaactttgctattacgagggagtattat
gggatcacggaggtgaaagagctggtgcagggcgggaagaccatcgctgtggacaggaca
aacaggaaggagtttgttcaggcgtatttacagtacgtgttcagtgatgccgtgcaggag
cagtattcggccttctccagcggtttcctgaaggtctgtggcggggagattctctctctc
ttccagccctctgagctcatggccatggtggtgggaaacaacaactacaactgggaggag
atggagaagaatgcctcctacaagggcgagttctctgcatcccacccaacagtaaagatg
ttttgggaggtgtttcatgagtttcccttggagaagaagaaacagtttttattgtttttg
acaggcagtgaccgcatccccatccacggcatggccagtctacgcatcgtcatccaatcc
actgctgcagaagagcactaccttcctgtggcccacacctgctacaacatgctggacatg
ccctgctaccagaccaaagagaccctgcggcaccggctcacgcaagccgtggagcagtac
gagggcttcagtctggtctga
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