Puntigrus tetrazona (Sumatra barb): 122347873
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Entry
122347873 CDS
T08985
Symbol
rin1b
Name
(RefSeq) ras and Rab interactor 3 isoform X1
KO
K17638
Ras and Rab interactor 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122347873 (rin1b)
Membrane trafficking [BR:
ptet04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122347873 (rin1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
Motif
Other DBs
NCBI-GeneID:
122347873
NCBI-ProteinID:
XP_043099069
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Position
7:7444146..7466561
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AA seq
727 aa
AA seq
DB search
MDARSLSVLDRLLLTHSIWLQLSINPDSAHQILQREIVGTFLVCKCSASHRKVLCVRLQE
GGVSQYPIREEDSTFSLESSALSFPDLCRLVAFYTVSRDVLPFPLELPDAIIQATTHTQL
ESISHLGLEFWSSQTSPGLPNGPPPPSAPHRTFRLISPCFVNPLFLQPPQPSRTASHKRH
RFKRSLRVRVSNETSLSLSGGESDLTLGETQGQNSNQGGPRRTGGLNVLRRTPALTPTSE
EEDEQMLGQIPPSNSLSQQGNTELNKDTEDGEVCLALERTRAPSLAELDSNSSFSSLEEE
EAQADLAHQWPPAARGTRFPSANPTSTLRRMTAAFVCVFAPERRVARLVDELSRDKRSTF
GSLVQDFLEKQRQEMEASKHSSAVELLQGMRRFLSQAKSLLLEAGEIEPPIETLVPENEK
DLALEKALFGCVLKPLKVQLQQTLISLHTKDGSLQKITDSLLAYQEGALERLAVRVGVLD
VRAMDRAKAKLTLMQRSHSPIDKVLLLLQVCKSVYKAMGAQPDQDVGSEDFLPALSYVLV
QCNIPQLLLETEYMMELLEPSWLTGEGGYYLTSVYASLCLIQSKPGATPTCSLTNEAQEY
LREWSRRRGQEAKTQKDSQLKQRFVRVLFQDDCRSAARTLLWKAGENVDSLAQSCAGAFG
VTEPQHYCLFWRSEGEMRPLPAHVQPHQLAGHEGASLSYLRSDHDFSKMRRLTRGGAVDL
GESVCEE
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgaggagtttgagtgttttggatcgtcttctcctcacacactccatatggttg
cagctgtcaatcaaccctgactccgcccaccagatcctgcagcgagaaatagttgggacg
tttctggtgtgtaagtgtagtgcctcccataggaaggttttgtgtgtgcggcttcaggag
ggaggagtgtctcagtatcccatccgtgaggaagactccacattttcccttgaaagttct
gccctgagcttccctgatctctgcagactagtggcattttacaccgtcagcagagatgta
ttgcctttcccacttgagctcccagatgcaattatacaggccacaacacacacccagctt
gaaagcatttcgcatttgggtttagagttttggagctctcagacgtctcccggccttcct
aacggcccccctccgccctcagcgccccaccggacattcagattgatcagcccatgtttc
gtcaaccccctgttccttcagcctccccaacccagcagaaccgcctcacacaaacgccac
cgctttaaacgcagcctcagggtccgtgtgtccaatgaaacctctctcagcttgtcgggt
ggagaatcggacctaaccctaggggagacacaaggacagaattccaaccagggcggcccg
agacgaacgggagggttaaatgtgcttaggaggaccccggcacttacgcccacttcagaa
gaggaagatgaacagatgttgggacagataccacctagcaattctctatcccagcaaggc
aacactgaactcaacaaagacactgaagatggtgaggtatgtctggctttggaaaggact
cgagctccttcccttgctgaattggacagcaatagttccttcagcagtcttgaggaggag
gaggcccaagcggacctcgcccaccaatggccaccagccgcacgtggtacccgttttccc
tcagcaaaccccacatcgactttgcgccggatgaccgccgcctttgtttgcgtgttcgct
cctgagcgccgagttgccagattggtggatgaactctcgcgtgacaagcgctccacattt
gggtcactggtgcaggattttttagagaagcagaggcaggagatggaggcctcaaagcat
agttctgctgtggagctgcttcaggggatgagaagatttctgtcccaagccaaaagtctc
cttctggaagcgggagaaatagaacctccaattgagacactggtgcctgaaaacgagaaa
gatcttgctctggaaaaggctctgtttggctgtgtgttgaagccgctgaaggttcagctg
cagcagacgctcatttccctccacactaaagacggttccttacagaagatcacagatagc
ttgctggcctaccaggagggggcgctggagcgcctggctgtacgagtcggcgtcctggac
gttcgcgccatggacagagcaaaggcaaaactcacgctgatgcagcgcagccattcaccc
attgacaaggtgctgcttctgctgcaggtgtgcaagagcgtttacaaagccatgggagca
caacctgatcaggacgtggggtctgaagacttcctaccagcgctgtcctatgtgctagtt
caatgtaatatcccgcaactgctgctggagacggagtacatgatggagctgcttgagccg
tcatggctgacaggagaaggcggatactatttgacgagtgtgtatgccagcctgtgtttg
atccagagcaagcctggggccacgcccacctgcagtctgaccaatgaggcccaagagtac
ttgagggagtggagcaggaggcggggccaagaagccaagacccagaaagacagtcagctg
aaacagaggttcgtgcgagtgttgttccaggacgactgtcgcagtgctgcgcgaaccctg
ctctggaaggcgggcgagaacgtcgactctttagcccagagctgcgccggtgccttcggc
gtgacggagccgcagcactactgtctgttctggaggagcgaaggggaaatgcgtcccctg
ccggcccacgttcagccccaccagctggccgggcacgagggagcgtcgctgtcctacctc
cgctccgaccacgacttcagcaagatgcgcagactgaccagagggggcgccgtagacctg
ggcgagtcggtgtgcgaggagtga
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