Puntigrus tetrazona (Sumatra barb): 122347959
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Entry
122347959 CDS
T08985
Symbol
tp53bp1
Name
(RefSeq) LOW QUALITY PROTEIN: TP53-binding protein 1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122347959 (tp53bp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
RTT107_BRCT_5
DUF4537
Motif
Other DBs
NCBI-GeneID:
122347959
NCBI-ProteinID:
XP_043099127
LinkDB
All DBs
Position
7:complement(28021709..28039345)
Genome browser
AA seq
1763 aa
AA seq
DB search
MDPGESDLDSSFPQTENPASXKATLQXDSQPDSVALEDDPDLSHCTLHSTTPLNLQPTSQ
SPVLELISSPTKSRCLQSDCQTEKIIRLRFVINFPPARHKICVHSYPISKRSVTEHMESE
ANSTTHCTETHGEMSQFGLLELSESQGVFEEDEQDGAPVNKTDSQKPSSQCGLKSSERTS
SNQDGYSTGSEVSSSCPSKPQDGESRKLSIQAILHSQLTDRQEDEEDVLVSSQDDMFEKE
RNGTKADSSVTELDRERLPTSTPAHSLRLLQLSGQGTLVQESLSQQSVDFVAATQDNLSQ
APYIVPNSPTEKEQNYNEAAASPMDTSAPPEDQPPGREEEPMDTDPCSKPQPTSSTPVSQ
NSPGFVLEKSLSVPSQPEFSHDVFISTPSLESGNNSQGAESSKKFPHQNNPSASQSGSPE
TLKKSSSGSSQPSEVAECFQLVLNSENGSFAQKTQLFIVEDDSQATQIVEEEGGVAADKS
NSSPKHLSQNASKNVIDPEPDTTSNLQSLSRMPESRSTEKAEDCNPSQKLSQGVNVGDQN
ISASPGATPSQLVGADCVSDTPSAPQISKTTVPDGSQTSPSAGRPVPQESQSQSVLNVSS
EKNTEKSQRQRLSQPMTHSHSVVTDSIRNAEEEERMDEGEIQKELTGEDTGIKLGLSQSQ
VLSPEPMEEENGEEEEEKKEEETSQRKASRDDHSSSSKEESFSVMVLEESQRVSQEKAKD
GRSQPFISSSQPVRGSVQDKRETTTKISGSQPVGSTKASPLQLERARSQSTQPSDAGRHK
KNLDNAANKSLSDSSGELPFHFTLPKEGELIRPAVSATPPQISQLKKTPRHSTPIEMTSF
SEPSEADVTRETTMAASEISVEESREGEEPAAVEQDGKLSLRMKLVTPVEEGSSGSEHFS
LQKPPLTDEEGSVSKATAVAMDVTSPSVFSRVREAHRQVQVEDDEESGDPPLRQANQLFR
SPNTNDSGLSPNCPKETVESRASDRVTQTVSLHPAGAGANSEPLVGGLSSPAKEQEVLST
SAKPRTPVRQRAVSQQTSVDISSTTSPTSKRAVSQQTSFDLSGPHNLSGRGEPSTPTRTH
PGPSLRRHVRTIQEVRTTVTRIITDVYYEDGREVDRKVTHESEEPVVDRCVVDSDISPSR
TGSSMTSGDLADVSSLSSKAPSHHSSSGTSSTGLGPIRMPDFLMPPSRGAKSGRRGGRQQ
PRSHTVVVGSEVTDARGSQVPTPLSPRGRARRGRPPSRGPLSRGGRTGQRGGAHGQGASS
SEEEHFAQRHIQAPGSPVEPSATSRSESLNTTSPDNSAGSSSFVGLRVLAKWSSNSYFYS
GSITRDLGENRFRLLFDDNQECEVQGKDILLCDPIPVETEVTALTEEEYFNIGVVKGHKS
QGSEFLYCVEKDGQSHWYSRMSVILSIEQGNRLREQYGLGPYEPSTPQTMASDISLDNLV
EGKRRRRGNSSGAGTPTRSSSNSPRNPGPSGKRKLISGVEDERTPAKRGRRGGGARVGQR
IAACNTSGSGADLPPDPNDLVATHGPLPENSSLFMGFVFMLTASSENDRDSNHQTGDEDD
EYVQRAPYNKHYTERQLEAGGGMILLDFNEEQCKAAYQSLLIADQHCRTRKYLLCVAGGV
PCVSQVWVRDCCQEKKLLNYRNYLLPAGLGPEGRIVEWHPRCSPFKALKVLLVSNDRVDL
WTSLLSMGGAAKVQHHKENKDFSDIPNVKFDLAVTSSARPLEEVKGVGPDLAVVSLEWLI
QSLICGKCLSYDSNSEFCHNTST
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggtgagagtgatcttgattcaagttttcctcagacagaaaacccagcctca
tagaaggccactttacaataggactcccagccggacagcgtggccttggaggacgatcct
gatctttctcattgtaccctgcacagcacaacgcctctcaacctgcagcccacgtcacaa
agccctgtgctggagctaatttcttcccccactaagagtcgttgtttacaaagtgactgt
cagactgagaagattatccgacttagatttgtcatcaattttcctcctgcgcgccacaaa
atttgcgttcactcttatcccatctctaaaagaagtgttacagagcacatggagtctgag
gctaactccaccacacactgtacagagacgcatggtgagatgtctcagtttggtctcttg
gagctgtcggagagccagggggtctttgaggaagatgagcaggatggagctcctgtaaat
aaaacagacagtcagaaaccgtccagccagtgtggattgaagagttcagaaagaacgtca
tccaatcaagatggatattctacagggtcagaggtcagttcaagctgcccttcgaagcct
caggatggggaaagccggaagctcagtattcaagctatactgcactctcagttaaccgac
agacaagaagatgaagaagatgtgcttgtttcctctcaggatgacatgtttgaaaaagag
agaaatggcacgaaggcggacagcagtgttacagagcttgacagagaacgcctgccaaca
tccacacctgcacatagccttcgcttgcttcagctgtctggacagggcacgcttgtacag
gagagtctttcacagcaatctgttgactttgtggctgccactcaggacaatttaagccaa
gcgccttacattgtcccaaattcacccacagaaaaagagcagaattataatgaagctgct
gcatccccaatggacacatcagcgccccctgaggaccagccaccggggagagaggaggag
ccaatggacacggacccctgctccaaaccacaacccacatcctccactccagtgtcccag
aactcccctgggtttgttctggagaaaagcctatctgtgcccagccagcctgaattctca
catgatgtgtttatttctactccaagtcttgaatctgggaacaatagtcaaggggctgag
agctcaaagaagtttcctcatcaaaacaacccatcagcaagccagtcaggatcgcccgag
acgctaaaaaagtcttcaagcggcagttcacagccctctgaggtggctgagtgttttcag
ttggtgctcaacagtgaaaacggcagttttgctcagaagacacagttgttcatcgtggag
gatgacagccaagccacacagatcgtggaagaggaaggaggtgttgctgcggacaagagc
aactccagccctaaacacctttcccaaaatgctagcaagaatgttattgaccctgagcct
gatacaacatcaaatttacaaagcctttccaggatgcctgaatcaagaagtacagaaaaa
gcagaagactgtaacccctctcaaaagctctcacagggtgttaatgtaggggaccagaat
ataagcgcttctccaggtgccactccatcccagcttgtcggtgcagattgtgtttcagac
acacctagtgctccacaaataagtaaaaccacagttcctgacggttcacaaacctcacca
tcagctggcagacctgtcccccaagagtctcagtctcagtcagtcttgaacgtttcgtcc
gaaaagaacacagagaaaagtcaacgccagagactcagtcagccaatgacacacagccac
agtgttgttacagacagtattagaaatgcagaagaggaggagcggatggatgaaggtgaa
attcagaaagagctgaccggagaagacactgggatcaagctgggtttgtctcagagccag
gtgctttctccagaacccatggaggaggagaatggagaggaggaggaggagaagaaggag
gaggagacatcccagcgtaaagccagcagagacgaccactcctcctccagtaaagaggag
agcttcagtgtcatggtgctagaagagagccagagggtctctcaagagaaagcgaaggac
ggcaggtcacagccgttcataagctcctcgcaacctgtgaggggctccgtacaggacaaa
cgtgaaaccacgacaaagatctcggggtctcagccggtgggatcaactaaggcttcacct
ttacagctggagagagctaggtcccagagcacacagcccagtgatgcaggacgacacaaa
aaaaacttggacaatgccgccaacaaaagtctgagtgacagctctggagagcttccgttt
cactttacattgcctaaagagggtgagctgatccgcccagcagtgagtgcaactcctcca
cagattagtcagctgaaaaagacaccaaggcacagcactcctattgagatgacctcgttc
tcagagccatcagaggccgacgttaccagagagacgacaatggcggccagtgagatttct
gtagaagagagcagagagggcgaagagccagcagcagtggagcaagatgggaaactgagt
ctcaggatgaaactggtgacaccggtggaagagggcagctcgggatcagaacatttcagc
ctgcagaaaccaccattaacagatgaggaaggatctgtctccaaggctaccgctgttgct
atggatgtaaccagtccttctgttttcagccgtgttcgggaagcacacaggcaggtccag
gtagaggatgatgaagagtctggtgatcctccgctcaggcaagcaaaccagctgttcagg
tcccccaacactaatgactcagggctgtctcccaactgcccgaaagagactgtggagagc
agagcctcggaccgagtcactcagaccgtgtctctgcatcctgctggtgctggagcaaac
tctgaacctctggtcggtggtctgtcctcccctgccaaagaacaagaggttctcagcact
tctgccaaacctcgaacacctgtccgacagcgagccgtgtcacagcagactagcgtggat
atcagctccaccaccagtccaaccagcaaaagagctgtgtctcagcagactagttttgat
ctgtctggaccgcataacctgtctggaaggggagaaccaagcacaccaaccagaacccat
ccaggcccatcactgcggagacatgttcgcaccatccaggaagtccgaacaacggtcacc
cgcatcattacggatgtctactatgaagatggcagagaggttgaccgcaaggttacccat
gagtcagaggaacccgtggtggatcgctgcgttgtagacagtgacatctcaccgtcccgc
acaggaagctccatgacatcaggagacctggctgacgtcagttccctctcctcgaaggcc
ccgtcacaccacagctccagcgggacaagcagcacgggcctggggcccatcagaatgcca
gattttctaatgccccctagccgaggggccaagtccggccggcgggggggacggcagcag
ccgaggagtcacacagtggtggtggggtcagaggtgacggatgcacgggggtctcaggtc
cccaccccgctgagcccccgtggccgtgcccggcgaggaaggcctccttcccgcggcccg
ctgtctagaggtggcaggacaggacagagaggtggtgcccatggccagggtgcatcatcc
tcagaagaggagcactttgcccaaaggcatatccaagcaccaggcagcccagtagaaccc
agtgctacaagccgctctgaatccctcaacaccacctccccagacaacagcgctgggtcc
agcagttttgttgggttgcgtgtgctggctaagtggtcatccaactcgtatttctattct
gggagtatcactcgagacctgggggagaaccgtttccgcctcctgttcgatgacaaccag
gagtgtgaagtacaaggaaaagacatcttactgtgtgatcccattcccgtagagacggaa
gtcactgccttaactgaggaggagtacttcaatataggtgtggtgaagggtcataagagt
caaggctctgagttcctttactgtgtggagaaagacggtcagagtcattggtacagcaga
atgtctgtgattctcagcatagagcaaggcaaccgtctgagggagcagtatggactggga
ccctatgaaccatctacaccccaaaccatggcctctgatatcagcctcgataacctggtg
gaaggaaagcggagacgtcgaggaaactccagtggagcagggacccctacacgcagctcc
agcaacagcccgagaaacccagggccttctgggaaacgaaagctcatcagtggtgtggag
gatgagaggactcctgcaaagagaggacgcagggggggaggggccagagtgggacagcgt
attgctgcttgtaacacatctgggagcggagcggacctgccccccgaccccaacgacctg
gtggccacacacggacctctgccggaaaattcctctctctttatgggctttgtcttcatg
ctgacggcgtcctctgaaaacgacagagactccaaccaccagaccggtgatgaggatgac
gagtatgttcagagagcgccgtacaacaaacattatacagagagacagctggaggcagga
ggaggaatgatcctgctggactttaatgaagaacagtgtaaagcagcctatcagagcttg
ctgatcgccgaccagcactgtcggaccaggaagtacctgctgtgtgtggcaggtggagtt
ccctgcgtgtctcaggtgtgggtgagggattgctgccaggagaagaagctgctcaactac
aggaattacctacttcctgccggtctggggccagagggacgcattgtggagtggcatcct
cgatgcagtcctttcaaagctctgaaggtgctgctcgtatcgaacgatcgtgtggatttg
tggacctctttgctctccatgggaggtgcagcaaaagttcagcaccataaagaaaacaaa
gacttttctgacattccaaacgtgaagttcgacctggcagtgacatcgtctgcgcgtcca
ctggaggaagtgaaaggcgtgggcccggacctggccgtcgtctctctggagtggctcatt
cagagcttgatctgcggaaagtgcctcagctacgacagcaactccgaattctgtcacaac
acttccacgtga
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