Puntigrus tetrazona (Sumatra barb): 122348011
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Entry
122348011 CDS
T08985
Name
(RefSeq) interferon regulatory factor 8-like
KO
K10155
interferon regulatory factor 8
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122348011
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
122348011
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GFIT
Motif
Pfam:
IRF-3
IRF
MH2
SprA_N
Motif
Other DBs
NCBI-GeneID:
122348011
NCBI-ProteinID:
XP_043099180
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Position
7:complement(18523730..18527780)
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AA seq
423 aa
AA seq
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MNPGGRRLKQWLIEQINSNIYNGLLWEDENRTMFRIPWKHAGKQDYNQEVDASIFKAWAI
FKGKFKEGDKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRIVPEEEQKLGK
ASGCITDTEKGCSPSLDELLKESPNDEYLGILKRSHSPLDEGSNMPSVQEWWHQGSHNAA
VVHQDPAGTFNAAFSQMMISFYYGGRLVGSTVTTHPEGCRISPCQPPLAGSFLYGPDSLQ
NIRFPSADLIENERQRHITLKLFSHLERGVLLRANREGIFIKRLCQSRVFWSGQDPQYNP
NPCKLERDAVVKIFDTARFLQVLQLYQEGHYQSLEPTVTLCFGEEFNDFSTVKSKLIIVQ
ITALNCQQFVDAVTARRSQYSSGNLEISDEMAGDQMARIYQDLCSYPVPQRASCFRDNLP
IPV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgggtggtcgcaggctgaaacaatggcttatagaacagatcaatagtaacatc
tataatggactgctgtgggaggatgagaaccgcactatgttcagaataccctggaaacat
gctggaaaacaagactacaaccaggaggtggatgcgtccatcttcaaagcgtgggcgata
tttaaagggaagtttaaggagggggataaagctgaaccagcaacatggaagactagattg
cgctgtgcactcaacaagagcccagattttgaggaagttactgaccgatcccagcttgac
atctcagagccttacaaagtgtatcggattgtgccagaggaggaacagaagttgggtaaa
gcctctggctgcatcactgatactgaaaagggctgctcaccaagcctggatgaacttctt
aaagagtctccaaatgatgaatacctgggcatcctgaagcgtagtcattctccccttgat
gaaggcagtaacatgccttcagtgcaggaatggtggcaccaaggatctcacaatgctgcc
gttgttcatcaagatcctgcgggtacatttaatgctgcattctctcagatgatgatttct
ttctactatggcggtcggctggtgggtagcacagttaccactcatccagagggctgccgt
atctccccctgccagccccctctggctggtagcttcttgtatggaccagacagtcttcag
aatatccgcttcccatctgctgatctcattgagaacgagcgtcagcgccacatcaccctt
aaacttttcagccatttggagcgtggtgtactgctgcgtgctaacagagagggcattttt
atcaagcgcctgtgccagagcagagtgttctggagtggccaggaccctcagtataacccc
aacccctgtaaactggagcgagatgctgtggtgaaaatctttgacactgccaggttcctg
caagtgctgcagttatatcaggagggtcattatcagtctctggagcccactgtcacactc
tgttttggggaagagtttaatgatttcagcactgtcaagagcaaattaatcattgtacag
atcacagcattgaactgccaacagtttgtggatgcagtgaccgcccggcgatcccagtac
agcagcgggaatctggaaatctcagatgaaatggccggtgatcagatggctcgaatatat
caggatctatgcagctacccagttccccaacgagcttcctgtttcagggacaacctgccg
attccagtctga
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