Puntigrus tetrazona (Sumatra barb): 122348068
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Entry
122348068 CDS
T08985
Symbol
shha
Name
(RefSeq) sonic hedgehog protein A
KO
K11988
sonic hedgehog
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
122348068 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptet01002
]
122348068 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ptet00536
]
122348068 (shha)
Peptidases and inhibitors [BR:
ptet01002
]
Cysteine peptidases
Family C46: hedgehog family
122348068 (shha)
Glycosaminoglycan binding proteins [BR:
ptet00536
]
Heparan sulfate / Heparin
Morphogens
122348068 (shha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
DHQS
Vint
DUF815
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
122348068
NCBI-ProteinID:
XP_043099269
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Position
7:23139344..23147076
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AA seq
418 aa
AA seq
DB search
MRLMSRVLLVSLLSLSLVVSGLACGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSALVSLRDGGQKAVKDLNPGDKVLAADGDGKLVYSDFIM
FTDRDSATRRVFYVIETKEPVEKITLTAAHLLFVLDNSTDDLHTMTAAFASGVRAGQKVM
VVDDSGQLKSVIVERIYTEEHRGSFAPVTAHGTIVVDRILASCYAVIEDHSLAHLAFAPV
RLYHSASSALFPKNFISQSNATLQQEGVHWYSELLYQMATWLLDSHVLHPLGMSVNSS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttatgtcgagagtgctgctggtgtctcttctcagtctgtccttggtggtgtcc
ggactggcctgcggtcctggcagaggctacggcagaagaagacatcccaagaagctgaca
cctctcgcctacaagcagtttatacctaatgtcgcggagaagaccttaggggccagcggc
agatacgagggcaagatcacgcgcaattcggagagatttaaagaacttactccaaattac
aatcccgacattatctttaaggatgaggagaacactggcgcggacagactcatgacacag
agatgcaaagacaagctgaactcgctggccatctctgtaatgaaccagtggccgggggtt
aagctgcgcgtgacagagggctgggatgaggacggtcaccattttgaagaatcactccac
tacgagggaagagctgttgatatcaccacctctgatcgagacaagagcaaatacgggaca
ctctctcggttagctgtggaggctggatttgactgggtctattacgagtccaaagcccac
atccattgctccgtcaaagcagaaaattcggttgcggcgaaatctggaggctgcttccca
ggctcggctctggtctcgctcagagacggcggacagaaggccgtgaaggacctgaacccg
ggtgacaaggtgctggcggcggacggcgatgggaagctcgtctacagcgacttcatcatg
ttcacagaccgagactccgcgacgcgacgcgtcttttacgtgatagaaacgaaagaaccc
gttgaaaagatcaccctcaccgctgctcacctcctttttgtcctcgacaactcaacggat
gatctgcacaccatgaccgccgcgtttgccagcggtgtcagagccggacaaaaggtgatg
gttgtcgatgatagcggtcagcttaaatctgtcatcgtggagcggatatacaccgaggag
caccggggctctttcgcaccagtgactgctcatgggaccattgtggtcgacagaatactg
gcgtcctgttacgccgtaatagaggaccacagtctggcgcatttggccttcgcgccagtc
aggctctatcacagcgcgtcgtcggccctgttccccaaaaacttcatcagtcagtccaac
gcgactttacaacaggagggggtccactggtactccgagcttctgtatcaaatggcaacg
tggcttttggacagccacgtgcttcatcctttggggatgtcagtaaactcgagctga
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