Puntigrus tetrazona (Sumatra barb): 122348108
Help
Entry
122348108 CDS
T08985
Symbol
lrrtm1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
122348108 (lrrtm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_1
LRR_14
LRR_LRWD1
LRR_NXF1-5
LRRNT
Motif
Other DBs
NCBI-GeneID:
122348108
NCBI-ProteinID:
XP_043099308
LinkDB
All DBs
Position
1:21032623..21037328
Genome browser
AA seq
524 aa
AA seq
DB search
MLMDFLLIGLYLKWPLRKPPGLILCSLGIVLKIVPLVGGSCPRPCRCDNKLLYCEGLNLT
DIPQNLSSAIGLSLRENNISELREGNFVGLSQLTWLYLDHNNIEIVEENAFERLRRVKEL
DLSTNRIESLPNGTFRPLPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHLRYNALKFIPV
RIFQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRTL
YMRNNKATIVVSTLDWTWDHLEKIDFSNNEIEYIEPHVFESVPNLNTLMLDSNKLTYIDQ
RILDSWTSLSSITLSGNDWECSRNVCALASWLSNFQGQRDSGLLCASPDIAQGEDILDAV
YAFQLCEDNVEATTQTFTATRNRARGFIYDGPTRNPYDLQDVEGGEVVTNSLTVTASADD
LESTMQIHKVVTGTMALIFSFLIMVLMLYVSWKCFPAGIRQLRQCFTSQRRKQKQKQTMQ
QMATTSASEYYVDYKPNHIEGALVIINEYGSCTCQQQASRECEV
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgctaatggatttcctcctaattggtctgtacctaaagtggccgctaaggaagccccct
gggctaatactgtgctccctgggcattgttctgaaaatagttccgttggtgggggggagc
tgtccgaggccatgccgatgcgacaacaagctgttgtattgtgaagggctcaacctgact
gacattccccaaaacctaagcagcgccattggtttgtccctgcgcgagaataacatctct
gagctgcgggaggggaactttgtgggcctgtcgcagcttacctggctctacttggatcac
aacaacatcgagattgtggaggagaatgcctttgagaggctgcgaagggttaaagagttg
gatctgagcaccaaccggatagagagcctacctaacgggaccttcagacctctgcccaac
ctgcgaatattggatttatcctataacagacttcagtccttggagccagaccttttccat
ggccttaggaagcttaccaatttacatttgcgctacaatgcccttaaattcatccctgtg
cggattttccaggattgcaggagcatgcaattcctggatctgggttacaaccagctgcag
agcctggcacgtaattcatttgccggactcttcaagctcactgagctgcatctggagcac
aacgagttggtgaaagtcaatctggcccatttcccccgcctcatatccctgcggaccctc
tacatgcgaaacaataaggccaccattgtggtcagcacccttgactggacctgggaccat
ttggagaagattgacttctccaacaatgagattgagtatatcgagccacacgttttcgag
agtgtgcccaaccttaacactcttatgctggactctaataaactgacttacatagatcag
cggattttggactcatggacatccctgagcagcatcactctgtcgggtaatgactgggaa
tgcagcaggaatgtctgtgccttggcttcctggctcagcaacttccagggacaacgtgac
agtggcctgctgtgcgccagcccagacattgcacagggtgaggacattctggatgccgtc
tacgctttccagttatgcgaagacaatgtggaagcaacaacacagaccttcaccgctacc
agaaaccgtgccagaggcttcatatatgatgggccaacgagaaacccctatgacctgcag
gatgtggaaggcggggaagtggtgaccaactccttaacggtgactgcgtctgctgatgac
ctggagagcaccatgcagattcacaaggtggtgacgggcaccatggccctcattttctcc
ttcctgatcatggtcctcatgctctatgtgtcctggaaatgtttcccagcaggcatcagg
cagttgaggcagtgtttcaccagccagcgtcgcaagcagaagcagaagcagaccatgcag
cagatggctactacgtctgcatccgagtactacgttgactacaaacccaaccatattgag
ggggcacttgtcatcatcaacgagtacggctcttgcacgtgccaacagcaggcatctcga
gagtgcgaggtgtga
DBGET
integrated database retrieval system
