KEGG   Puntigrus tetrazona (Sumatra barb): 122348225
Entry
122348225         CDS       T08985                                 
Symbol
kdm4c
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ptet03036]
    122348225 (kdm4c)
Enzymes [BR:ptet01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     122348225 (kdm4c)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     122348225 (kdm4c)
Chromosome and associated proteins [BR:ptet03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    122348225 (kdm4c)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Tudor_3 Tudor_5 Rad9_Rad53_bind LBR_tudor
Other DBs
NCBI-GeneID: 122348225
NCBI-ProteinID: XP_043099456
LinkDB
Position
1:12644679..12658507
AA seq 1494 aa
MAGVGASAPANPACKIMTFRPTMEEFKDFNQYLVYMESQGAHRAGLAKVIPPKGWKPRRN
YDDIDDFVIQAPIQQMVAGQSGLFTQYNIQKKPLTVQEFRRLANSDMYCTPRYLNYEDLE
RKYWKNLTFVSPIYGADVSGTLYDEDIEEWNIGHLNSILDVIEEDCGVSIQGVNTPYLYF
GMWKTSFSWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPNSFKSCEAFL
RHKMTLISPSVLKKYSIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFASIRWID
YGKVATQCTCSKDMVKISMDPFVRRFQPDRYQAWTQGKDSCPLDHTLATPSTTPELQSWL
QRRRRKAPSTSSLHHPRACSKRLKTVDSAPVKGRRSRGAALTSKNEDNENSEKHQKESQY
SGLTGPCRQMCVVKVTRVENDLLAHSTRQVKEDSSEQLSTSPLTLTSRQSDPDPGHPSSQ
TSLIFNEDRVSANSNSTTQPGPESTSDSSVTVDVTLDSERTAESPNQALNCEPVSVTSAP
SIPVTHSPRLNSTGAAVLFSETDSQQAKIETEETVANILTETSIDCGTSALYKEQSSIRL
DSALQGLETSENRTNSEIQNTSFCEMPLLMPELIEERVNPQSLAPEMPSLTLAVRLDTAN
HRPQSPNSNAPVLHLEKSHSPPVITDDVGTCSDWPFVTPREGVNQSQNSISDTFIAKPAS
PSLVPQWGPPEESKQEGHEHIPLTDQDSQNKSISQFKITTQSISQSSTMEDVDLMDTRVS
EMASNSVDGEDKQTSLSLEEHSSSLTSSQGHYVESKPFTIWKNLSSQNPAVLIESLQPEL
VVGLTTGVSSLTDYAHDSLSYNMWSESGCQQEKFSDSPNSSPSTQTWTNLEPIPMQCSAG
DMAPNAPPDLKQQNVELETAEACVLSEQAGSQGPQEEEFKDQEYYEGAKSEHDGSVSDSE
SCESGDKGAESSSESSEENTMSDPEYVETGLEPGEVCTYHMQTVKKTAKSWRHPLRKPTA
RAVPSAVKQQTASDDETLEDCATKEEEPETEEWAKPLVHMWQHRKAHFQYEREYNTAAAK
TSPHCAVCTLFMPYYQPDNLEERRHDVSMSATTESQGSCSEEAGFRSRPLIPEICFAYQE
GPCPLNTLLEEDGSSPLVACNSCCVQVHASCYGVAANDVSPVWTCDRCVSGDLAAGCCLC
NLRGGALKRTSDDRWVHVMCAVGLPEVKFIDVVKRAPIDISAIPVQRYKLKCIYCRNRIK
KVSGACIQCSCGRCPTSFHVTCAHAAGVPMEPDDWPYVVFITCHRHQSRSSSAKAKVSKS
ELEVGQTVISKHKNLRYYSSRVTQVMAQTFYEVMFDDGSFSNDTFPEDIVSRDCAQFGPP
EVGEAVQVKWPDGLFYGAKYLGSNTSYMYQVEFEDGSQVLAKREDIYTLDEDLPKKVKGR
LSTASSMRFQDAFFTTQGERKRRRTPNSRFQTDYIAHISPRTFTRNSETRSKAN
NT seq 4485 nt   +upstreamnt  +downstreamnt
atggcaggtgttggggcaagtgccccggctaaccctgcctgtaagatcatgaccttcaga
cctaccatggaggagtttaaggacttcaatcagtacctggtttatatggagtctcaggga
gctcatcgtgccggactggctaaggttattccacccaagggctggaagccacgtcgcaat
tacgatgatattgatgatttcgtcattcaagcacctattcagcagatggtggctggccaa
tcagggctcttcacccagtacaacatccagaagaaaccgctcactgtgcaagaattccgc
agactggccaacagtgacatgtactgcacacctcgctacctgaactatgaagacctggag
aggaagtactggaagaatctgacattcgtctcgcccatctatggtgctgatgtgagcggc
acactctatgatgaggacattgaagagtggaacatcgggcacctgaactcaatcttggat
gtgattgaggaggattgtggagtgtctattcagggtgtaaacacaccctatctgtacttt
ggcatgtggaaaaccagcttctcctggcacacggaggacatggacctctatagcatcaac
tacctacacttcggggagcccaaatcctggtatgccatccctccagaacatgggaagaga
ttggagcgtcttgctataggtttctttcctaacagctttaaaagctgtgaggcattcctg
agacacaagatgacactgatatccccctctgtactaaagaaatacagcataccatttgat
aagataacacaggaagcaggggagtttatgatcacgtttccttatggctaccatgctgga
ttcaaccacggcttcaactgtgctgaatccaccaatttcgccagcatccggtggatcgat
tatggaaaggttgctacgcagtgtacatgcagtaaggacatggtgaagatctccatggat
ccatttgttagacgattccagccagatcgctatcaggcttggacgcaaggcaaagactca
tgtccattggatcacaccttggccacacccagcaccacaccggagctgcagagctggctt
cagagacgtcgcaggaaagcaccctccacctcaagtctccatcatccacgtgcatgctcc
aaacgactgaagactgtggactctgcaccagtgaagggtcgcagaagtagaggggcagct
ttaacatcgaaaaacgaggataatgaaaactcagagaaacaccagaaagaatcacagtac
tcagggctcactggtccatgtcgacaaatgtgcgttgtgaaagtaacaagagtggagaat
gacttactggcccactcaacaagacaagtcaaagaggattcctctgagcaactctccacc
tctccactcaccctcacatctagacaaagtgaccctgatccaggtcacccaagctcccag
acatctttaattttcaatgaagatcgagtatccgcaaactcaaactccactacacagcct
ggacctgaatcaacctcagacagcagcgtcactgtagatgtgactctggactcagaaaga
actgctgaaagtcctaatcaagcattaaactgtgaacctgtctcagtaacaagtgcacct
tctattcctgtgacccattcacccagacttaattccactggtgctgcggttttattttca
gaaactgattcccaacaagctaaaattgaaacagaagagacggtcgccaatatcttgact
gagaccagcatcgattgcggcacatcagcactttacaaagagcaaagctcgatccgtcta
gactctgctcttcagggtttggaaacctcagaaaacagaacaaactctgaaatccagaat
acttcattttgtgaaatgcctcttctaatgcccgagctcatagaagagagagtcaaccct
caatctctcgcacccgaaatgccctcactgactcttgctgttcgactcgacaccgcaaat
cacagacctcagagtccgaacagtaatgcacctgttctccatctggaaaaatcacactcg
cctcctgttataacagacgatgtggggacttgttctgattggccctttgttacaccccga
gaaggtgtaaaccaatcacagaactcaatctcagacacctttatagcaaaaccagcatct
ccttccttggttccacaatgggggccaccagaagagtctaaacaagaaggacatgaacac
atcccactaacagaccaggactctcaaaataagtccatttcacagtttaaaatcactact
cagagtatttcacaatcttctaccatggaagatgtggacttaatggacacccgtgtctct
gaaatggccagtaactcagtagatggagaggacaaacaaacttctctaagtctcgaggag
cattcaagctctctcacatcctcccaaggtcactacgttgagtccaaacctttcactatt
tggaaaaacctcagctcacagaatcctgcagtgctcattgagagcttgcagcctgagctg
gtagttggtcttaccacaggtgtgagcagtcttacagattatgcccatgactcgctgtcc
tacaacatgtggtcggaatcagggtgccaacaagaaaagttctcagattctccaaactct
tcaccaagtactcagacctggaccaacctggagcccattcccatgcagtgctctgctgga
gacatggctccaaatgcacctcctgatctgaagcagcagaatgtggagttggaaacagct
gaagcttgtgtgctcagtgagcaggcaggctctcagggacctcaggaggaagagtttaaa
gatcaggagtattacgaaggtgcaaagtcagagcatgatgggtctgtgagtgactctgag
tcgtgtgaatcaggagataaaggtgctgaaagcagcagtgaatccagtgaggagaacacc
atgagtgaccccgaatatgtggaaacgggtctggagccaggggaagtctgtacttatcac
atgcaaactgttaagaagacagccaagagttggcgccaccccctcagaaaacccactgca
agagcagtgccaagtgctgtgaaacagcagactgccagcgatgatgagactttagaggac
tgtgcaactaaagaagaggagcccgaaactgaggaatgggcaaagcctttagtgcatatg
tggcagcacagaaaagctcattttcaatatgaacgagaatacaacacagctgcagctaaa
acctctccacactgtgctgtctgcacccttttcatgccatactatcagcctgataattta
gaggagagaaggcatgatgtctcgatgagtgctacgacagagtctcaggggtcatgttcg
gaggaggcaggattcagatcacgacctttgatccctgaaatttgctttgcgtaccaggag
ggcccatgtcccttgaacacactgctggaggaggatggatccagtcctcttgtggcctgt
aatagttgctgtgttcaagttcatgcaagttgctacggtgttgctgctaatgatgtcagc
ccagtgtggacatgtgacagatgtgtgagcggagacctggcagctggatgctgtttgtgt
aacctcaggggaggtgcattaaagagaacttcagatgacagatgggtccatgtgatgtgt
gctgtgggcctccctgaggtcaagttcatcgacgtggtgaagagagctcctattgacatc
agtgccatacctgtacagagatataaactgaagtgtatatattgccgtaacaggataaag
aaggtgtccggagcatgtattcaatgctcatgtggtcgttgcccaacctctttccatgtc
acttgtgcacacgcagctggagtacccatggagcctgatgattggccgtatgtggttttc
atcacctgtcacaggcaccagtcacggagctccagtgctaaagcgaaagttagcaaaagt
gaattagaagttggccagacggtgatctccaaacacaaaaaccttcgttactacagctca
cgtgttacccaggtcatggcccaaacattctatgaggttatgtttgatgatggctcattc
agcaatgatacattccctgaagacattgtgagcagagattgtgcccagtttgggcctcct
gaggtgggggaggctgttcaggtgaagtggcctgatggacttttctatggagccaagtac
cttggctctaatacttcatacatgtatcaggtggaatttgaagatggatcccaagtactg
gcgaagagagaggacatttacacgctggatgaagaccttcccaaaaaagtcaaaggtcgt
ttgtccacggcgtccagcatgcgtttccaggatgcgttcttcaccacacaaggtgaaagg
aaacggcgacgcacaccaaattctcgatttcagacggattatatcgcccatattagccct
cgaaccttcaccaggaactcagaaacacgcagtaaagccaactaa

DBGET integrated database retrieval system