Puntigrus tetrazona (Sumatra barb): 122348272
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Entry
122348272 CDS
T08985
Symbol
pkd1l2a
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122348272 (pkd1l2a)
04091 Lectins [BR:
ptet04091
]
122348272 (pkd1l2a)
Ion channels [BR:
ptet04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122348272 (pkd1l2a)
Lectins [BR:
ptet04091
]
C-Type lectins
Others
122348272 (pkd1l2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Lectin_C
SUEL_Lectin
Ion_trans
REJ
GPS
PKD
Motif
Other DBs
NCBI-GeneID:
122348272
NCBI-ProteinID:
XP_043099519
LinkDB
All DBs
Position
7:complement(36513259..36538784)
Genome browser
AA seq
2477 aa
AA seq
DB search
MNNHTLYTLLLILSFHVISIWSDDEEVPSCPEHQQAFESSCYEFVALQRSFFSAQAWCER
GGGHLAFIQNDETQQFLQKHLQSEMDWWIGLAPASANLTLDSAAVEGPLSWLDGSDVSYS
NWLQEPSLNATCGYIKRDCGFQWETTSNCSLELYFICEFESGHSLACADHNATLQCGSGQ
VIEVDDSFYGRKTVHYCRSSHAPSQTSPQQEECSWVDIVDTVSEHCHGLQVCQAAADISS
FGEPCPVLGSYLAVEYHCKDALHLLMRKLAAVFDNITITVKWLLHPFQGNLTCTLNAGDG
HVIDNYSPDVMENVVHKYSRAGVYTLTVECSTSEWHVTAYRSITIQEPLGQFGTIKCHSM
NQSTDHSNCKALYNNPLRIQVTLDAGTNVTYKIQHGKTELASSSAIRGVVPHNITVSPEV
QEQLGPGCHQITVVALNGVTAEDLSTVLELCLVEPVEGLMVDVKPEHEQCVVHALYVNVS
LAQGAPAQLHFLVSAVNHTFSEMHEMLHGRPQVFAISNAIQGKLNVVVKAENSFSSMEMD
GGNTTVKCQNETVNQHEGDEISERARTVRENNLKISVDPEVPVIGTTSVKLYVDGLVDDK
SIWRCHEACPCPDEVTHRDHEISKDCLPPVYSFSVYTVDTKSHGFTRSGSRCITVIPGEN
MKLSVTCSNCSPVNVAESVTLQVQCEGCQKIVWYFESENDFTGLLRHCYSESVKKPLIQK
AEGSSSFTIESDALRNAKQDITVVVYAIKGSLSGSARYTVPIVDPSTEDTSVQPHLLTTV
SPSSHTTDKSLNSVTPPSCIISPLVGDVLSPFKISCSVDPSFCKSESCIFCFKTGKGNYF
YCGAEPTVESLYLPLGNKHNNYSLAVMISVKNAAGVTADTAVTIRVKDTSSNHTVGDLQS
LVSNQVSQLQQQDRLTGAALAQMFQSVSDRLNDALPEGQHDSVKKELRQQMLQSLSAATS
SFPPKNPAEVQMSANVVAGLTTQGHELTDTAQLQASYLLTNLSTSLVSLTRSGKEFSEQI
LQASTPIIDAVSNIIKVSSSTSKQNEICSHLLNTVDNVQSALLAEKKVNEEPTILSTSVF
GLYVNRISLDGLSKQPFNIQSKSSASFILPSLGSDVVSPDEPVDVRMTSFGMNPFSLNDG
EQISGSVGSLSLTKMNGSVIPVANLTEEIEILLPRTEVAEANQTLLELANFSTVVINVTA
PNISLVFKLDPSEETPLQLLLGFQEYPNDTNYEAQIQLPQDGDSEEEMYTWVLNPTEMTI
EVGVYYLLVRPVVGAGVNSTNASVFITTIAAHCLYWDDRKANWSGDGCRVGPRTTTLVTQ
CLCTHLTFFGSSFFVMPNVVDVSRTAELFATFVNNPVVVCFVGAIILAYLVVVMWARRKD
SQDAVKVKVTVLEDNDPLAEYRYLLSINTGHRRGASTSSQVTVTLQGTEGESEPHHLTDP
EKPVFERGGLDMFLLTTPFSLGELQNIRLWHDNSGEHPAWYVNKVMVQNLETGQKWHFLC
NSWLSIDLGECTLDKVFPVATEMDLKRFSNLFFMKTAKDFRDGHIWFSVISRPPSSNFTR
VQRVSCCFSLLLCTMLTSIMFWGIPSDPSEQTMDLGQIEFTWQQVMIGVQSSIIMFPINL
LIVSIFRNARPREQMSKSSSKQQSKIDPKKQGKTGRVSPNQPSHNNHREITPDTVIKDIK
RIAQSLYKVMRRPVPRIEVDSTKTDINSLLSLVEEIIRQHNRTGNEFYTNSSKKEQTFAA
SLECVNLKESSFCESPEQNGKRSIYSQYLYKQLQNLERELRLLGPSSFSKPDSYNQAVLQ
VQGMKNLLEAQVSSCSVSGLHSRSSSLTEGNSGDGKKCCQKGLPWWFVFVGWFLVVATSG
VSAYFTMMYGLTYGKERSISWLISMVVSFFESLFITQPVKVLGFAVFFALVLKTVDQEDY
GDVPIDGTLPNTDDPDTIRIARRDSTCSFYQPPPPSDIEKMRNNIIKEQKVFALIREILI
YVGFLWMLLLVAYGQRDPNAYYLTQHIRQSFSNGISDSMKHKDILNWAQSSLLSNLFGQY
SGFITDGNSKLVGNARLRQVRVRKDSCKIAKTMQHSVPDCHAPYSWEAEDMGFYSLGWNR
SKNVNGSKIVPTPWHYQTQAELRANPVWGGLALYKGGGFVVELGPDKKNASSLLQYLYDS
IWLDVYTRAVFVEFTVYNANVNLFCIVTLIFETTGVGSFHYRSEVQTVHLYQSTGGFHVF
VMASEAIYFLFILYYMFLQGKLIKQQKWEYFRSKWNLLELAIIILSWSALSVFVKRTILG
NRDIEYYQNNKDIFASFYETATADAVLGYLIAFLVLLATIKLWHLLRLNPKLHMITSTLQ
RAWTDISGFIVVMTIMFLAYSIACNLMYGWRLYSYRTLLEAAQTIICLQLGIFNYDEVLD
YNPVLGAFLIGSCIIFMTFVVLNLFISVILVAFNEEQLHPTPSEEEEIVDLMLMKLCSLL
GIKCKKKQIDADSSVVS
NT seq
7434 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatcacactctctacacactgctcctaatattgagttttcacgtcatctcaatc
tggagcgatgacgaggaggttccttcgtgcccagagcaccagcaggcctttgagagctcc
tgctatgagtttgtggctctgcagcgcagcttcttcagcgcacaggcttggtgtgagcga
ggcggcgggcatctagctttcatccagaacgatgagacccagcagtttctacaaaaacac
ctgcagtcggagatggactggtggataggactcgctcctgcctccgccaacctcactctg
gactctgctgctgttgaaggtcccttgtcctggttagatggctcggatgttagttattcc
aactggcttcaggagccctcgctaaatgcgacctgcggctacatcaagagagattgtgga
tttcagtgggaaaccaccagtaactgtagcctggagctctacttcatttgtgagtttgag
tctggacactctttagcctgcgctgatcataacgctacgcttcagtgcggctccggtcaa
gtgatagaggttgatgacagcttctacggcaggaaaacggtgcattactgcaggagcagc
cacgctccctcacagacatctccacagcaggaggagtgcagctgggtggatatagtagat
actgtgtcagagcactgccacggactgcaggtgtgtcaggctgctgctgatatttcatct
tttggcgagccgtgccctgtgctgggaagctatttggctgtggaatatcactgcaaagat
gctctccatctgctgatgagaaagctggctgctgtctttgacaacattaccatcacagtg
aagtggttgctgcatccatttcaaggcaacctcacgtgcacactgaatgctggggatgga
cacgtcattgataattacagtccagacgtgatggagaatgtggtgcataagtacagccgt
gctggagtatatactctcacggtagagtgcagcactagtgagtggcatgtgaccgcctac
aggagcatcactatccaggaacccctcggacagtttgggaccataaagtgccacagcatg
aatcaatccacagaccattccaactgcaaagctctttataataaccctctgagaatccaa
gtgacattagacgcaggaacaaatgtaacgtacaaaattcagcatggaaaaacagagctg
gcctcctcttccgctatcagaggggttgttccacataacatcactgtatctccagaagta
caggagcagctgggaccaggctgccaccagattactgttgtggctcttaatggagtgacg
gcggaagacctctccactgtcctggagctgtgtttggtggagccagtggaaggcctcatg
gtggatgtgaaacctgagcatgagcagtgtgtggtccatgccctgtatgtcaatgtatct
ctggctcagggggctccagcacaactgcattttctggtgtctgcagtcaatcacaccttt
tccgagatgcatgagatgctacacggaagaccacaggtttttgccatctcaaacgcaata
caaggcaaattaaatgtggtggtcaaagcagagaattccttctcaagcatggaaatggat
ggtggaaacacaacagtgaaatgtcagaacgaaacagtgaatcaacatgaaggagacgag
atcagtgagcgtgcgagaactgtcagagaaaataatctaaagatcagtgtagatccagaa
gtcccagtcatcggtaccaccagtgtcaagctgtatgttgatggattagtggatgacaaa
tctatctggagatgccatgaggcttgcccatgtcctgatgaagtgacacacagagatcat
gagatatccaaagattgtcttccaccagtatacagtttctctgtgtatactgtagatacc
aagtcacatggtttcactcggtctggaagcagatgcatcactgtcattcctggagagaat
atgaagctgtctgttacctgttccaactgcagtccggtgaacgtcgctgagagtgtgact
ctacaagtgcagtgtgaaggatgtcagaaaattgtttggtactttgagagcgaaaatgat
tttactggtttgctaagacactgttactcagagtcagtgaaaaagccactgatacagaag
gcggagggcagcagctcttttaccatagagagcgatgcactacgaaacgcaaagcaggat
atcacagtggtggtttatgctatcaaaggcagcttatctggatctgctagatacactgtt
ccaattgttgatccatctactgaggatacatcggtccagccccatttgctgaccactgtc
tcaccatcatctcacactactgacaaatctctcaactctgtgacgcctccctcctgcatc
attagccctcttgtgggtgacgttctctctccctttaagatcagctgctccgtcgatcca
tctttttgcaaatctgagtcctgtatattctgctttaaaacgggcaagggtaattatttt
tattgtggtgccgagcccacggtggagtcgctttacctccctctagggaacaaacataac
aactacagtctggcggtgatgatctcggttaagaacgcagcaggtgttactgctgacact
gctgtaaccattcgggtaaaggacaccagtagtaatcacacagttggagatctccagtct
ctggtttccaaccaggtgtctcagctgcagcaacaggatcgactcactggggctgcactg
gcacagatgttccagtctgtatccgacagactgaatgacgcactacctgaaggacagcat
gacagtgtcaaaaaagagctaagacagcagatgttgcagagtttgagtgctgccacaagt
tccttccccccgaagaatccagccgaggtgcagatgagtgctaatgtggttgcaggcctt
accacacagggtcatgagctgacagacactgctcagttacaggctagttatctgcttaca
aacctcagtacatccttggtttccttgacgcgttctggtaaggagttctctgaacagata
ctgcaagcatctacaccaataattgatgctgtcagtaacatcatcaaggtttcttctagt
acttccaagcagaatgagatctgcagtcacttactaaatactgtggacaatgttcaaagt
gccttgttggctgagaaaaaggtgaacgaagagcccaccatactcagcacttcagttttt
ggtttatatgttaacagaatatcattggatggtctttcgaaacagccctttaacattcag
agtaaaagctctgccagttttatcctcccatctctgggctctgatgttgtgtctccagat
gaaccagtagatgtacggatgacaagttttgggatgaatccattctcattaaatgatggt
gagcagatcagtggatcagtggggtctctctctcttactaaaatgaatgggtctgtgatt
ccagtggcaaacctcacggaggaaattgagattctcttaccaaggacagaggtggcagag
gctaaccaaactctactggaattggcaaacttcagcaccgtggtcattaatgtgactgca
cccaatatatctctggttttcaagctagacccttcagaagagacacctctgcagttgctc
ctgggttttcaggagtaccctaatgatacaaattatgaggctcagatccagctacctcaa
gatggtgactctgaagaggaaatgtacacatgggtgcttaaccctacagagatgacaata
gaagtaggtgtttactaccttctggtgaggcctgttgttggtgcaggcgtgaattcgaca
aatgcctcagttttcatcacaaccattgctgctcactgtttgtactgggatgatagaaaa
gccaactggagtggtgatggctgtagggttggccctcgcactacaacattggttactcaa
tgcctgtgtacccatttgaccttttttggaagctctttcttcgtcatgcccaacgtcgtt
gatgtctcccgcactgctgaactatttgccaccttcgtcaacaacccagtggtggtgtgt
tttgtaggtgccatcatcctggcttacctggtggttgtgatgtgggcaagaagaaaagac
agtcaggatgcagtcaaggtgaaggtcacagttcttgaggacaacgatcccttagctgaa
tatcgttacttgttgagtatcaacacaggacatcgtcgtggggcctccacctcttctcag
gtaacagtgactctacaaggaacagagggagagagtgaacctcatcatttgactgaccct
gaaaagccagtgtttgaaaggggaggactggacatgttcttgctgaccacccctttctct
ctgggagagctacaaaatattaggctgtggcacgacaattcaggagagcatcctgcttgg
tacgttaacaaggtcatggtacagaacctggagacagggcagaagtggcacttcctttgc
aactcatggttgtccattgatttgggagaatgtacattagataaagttttccctgtagca
acagagatggacttgaaaaggtttagtaatctgttcttcatgaagactgcgaaagatttc
cgtgatggtcacatctggttctctgtaatcagtcgtcccccaagtagtaactttacacga
gtgcagcgtgtctcctgctgtttttcgctgttgctctgcaccatgttgaccagtatcatg
ttctggggtatcccgtcagatccctcagagcagaccatggatctgggtcagattgagttc
acctggcagcaggtcatgattggtgtccaaagttccattatcatgtttcctatcaatctc
ctcattgtgagtatcttccgaaatgctcgaccaagagagcaaatgtctaaatcatcttcc
aagcagcagtcaaagatagatcccaaaaaacaaggcaaaactggacgagtgtctccgaat
cagccttcacacaataatcacagggaaataacacctgacactgtgataaaggacatcaaa
cggatagcacagtcactctataaggtcatgagaagacctgttccaaggatagaagtggac
tccaccaaaacagatattaacagtctgctgtcactggttgaagaaataattcgtcaacac
aatcgaactggaaatgagttttacactaactcttctaaaaaagagcaaacttttgctgct
tctctggagtgtgtaaatctgaaagaaagtagtttttgtgagagcccagaacaaaatgga
aaacgcagcatctacagccagtatctttacaaacaactgcaaaatctggagagagagctg
agattgctggggccttcatccttctctaagccagacagctacaatcaggctgtattgcag
gtccaaggcatgaagaatctacttgaagctcaagtctcctcctgttctgtgagtggttta
cattcccgtagctccagcctcacagagggcaacagtggagatggcaaaaagtgttgtcag
aaaggcttgccctggtggtttgtgttcgtcggttggtttcttgttgtagccaccagtggt
gtttcagcatactttactatgatgtatgggctgacctatggcaaggagcgctccatcagc
tggctcatttcaatggtggtgtcattcttcgaaagcctcttcatcacccagcctgtaaaa
gtactgggctttgcagtcttctttgctctggtactcaaaactgttgatcaagaagattat
ggagatgttcctattgatgggactctacccaacacagatgatccagatacaatcagaatt
gccaggagagacagcacatgtagcttctatcagcctcctcctcccagtgatatagaaaag
atgagaaacaacatcatcaaggagcagaaagtttttgcattaatccgagagattctcatt
tacgtaggattcctgtggatgcttctcttggtcgcatatggtcagcgagatccaaatgca
tactacctcacccagcacatccgacagagcttcagcaatggcatttcagacagtatgaag
cacaaggatatattaaattgggcacaatcctccttgctcagtaatctgtttgggcaatat
tcaggcttcataacagatggaaactctaaacttgtcggcaatgctcgactccgccaggtt
agggttagaaaagactcttgtaaaattgccaagaccatgcagcactctgttcctgactgt
catgccccatactcctgggaagcagaggacatgggtttctacagtctaggctggaatcgg
agtaaaaatgtgaatggctctaagattgtacccacaccttggcactaccaaactcaggcc
gaactcagagcaaaccctgtttggggtggattggccctttataagggtggaggatttgtt
gtggaactaggtccggataaaaagaatgcaagcagtcttcttcaatatctttacgacagc
atctggctggatgtgtatacacgggctgtatttgtggagttcacagtttataatgcaaat
gtgaacctcttttgcattgtgactctcatatttgagaccacaggagtgggttcattccat
tatcgcagtgaggtgcagactgtccatctttatcagtccactggtggctttcatgtattt
gttatggcatcagaggccatatatttcctcttcattctctattacatgtttttgcagggc
aaactgataaagcagcaaaaatgggaatatttcagaagcaaatggaatctattagagttg
gccattatcattttaagttggagtgcactatctgtgtttgtcaagaggacgatactgggt
aaccgggacattgagtactaccaaaataacaaagacatatttgccagtttttatgaaaca
gccaccgcagatgctgtactgggctatctgatagccttcttagttctgctggccactata
aagctgtggcatctattgaggctcaaccccaagctacacatgatcacctccaccctgcag
cgggcatggacagatatctctggcttcatcgtggtcatgactatcatgtttttggcttat
tctattgcttgcaatttgatgtacggctggaggctctactcatacagaactctactcgag
gctgcacagaccattatttgtctacaactgggtatttttaactacgatgaggttttggat
tacaatccagttctaggagctttcctgattggatcctgcattatcttcatgacattcgta
gttctcaacctctttatatccgttattttggtggctttcaatgaagagcaacttcatccc
acgccttctgaagaagaggagatcgtagacctgatgctgatgaagctctgcagtcttctt
ggcatcaaatgcaagaaaaagcaaattgatgcagattcttcggtcgtatcgtag
DBGET
integrated database retrieval system
