Puntigrus tetrazona (Sumatra barb): 122348281
Help
Entry
122348281 CDS
T08985
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122348281 (dennd4c)
Membrane trafficking [BR:
ptet04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122348281 (dennd4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
DUF2464
PPR_2
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
122348281
NCBI-ProteinID:
XP_043099530
LinkDB
All DBs
Position
7:33715925..33764992
Genome browser
AA seq
1942 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSEAKSSGPKAPITDLAVINKSAGETVPEGFT
CIESTYSGQPANLNHGSLKSPELFLCYKRARGKPPLIDIGVLYEGKERLIQGCEVIEATP
FGRCANVNNSSATSQRIFITYRRAPPVQPQNSLAVTDICVIITNKGETPPHTFCKVDKNL
NCGLWGSSVFLCYKKSVSASNSIAYKAGLIFRYPEEDYESFPLSESVPLFCLPMGAKIEC
WAPNTRYPLPVFSTFVLTNSNGEKVYGAGIQFYEPYPVDGLSEKQKIQLGLVSTVDKKVI
PDRTVNTNKCICLLSRWPFFESFRKFLMFLYKLSANGVNPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLILSQPVCTPLPLSGADYSTLLMNLGPENCATLLHFILLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKRNSNWKNLPKKPCKSLINSLGNLHHQLITVRRTAPEGLAVEM
TPIEADFTWHKKKTELEMEIQEAFLRFMASILKGYRTYLKPITQAPSEKATAADSLYDLQ
GFLKSRDRAHQKFYSQLTKTQIFIRFIEECTFVSDKDTSLAFFDDCIGKLFPSDKGTEKG
TKVEGESSEDTRLMELDESQKSEHTVFVMPPEPPPEDGPDPPLKYSYKNFPSLRLELFDR
PQELRPALSTGAAGASVSSSPALLAKRTKQEIKMAYKLAKRFYSNPPQWAKCLFSHCYSL
WFICLPASMRTAQSKSRTMQQAFNVLLKMRSSEVEVLDEVCYRVVMQLCGLWEMPVMAVR
VLMEMKKAGVEPNAITYGYYNKAVLESPWPSRNRSGLFMWTKMRNLVRGVVQFKQALRGN
TLKGGPSLITTELSASAAAAADGDRLSHGSIDSSNEPIAEHILFPHSHIVEDAIDSHYIT
AGQSDQGYGSKDELPQDLTDGPVTSPPLSTNHTSSSKATKTQNGDDIASSVDSVVAVTEP
PSPAETAPSVASIVKLSTEIPVHFDSPADRGETAGVCSAKLFIPRKKSEDVSLPLEDDSA
IPVSQLSQAGQQQRMKAFVERSCSFSAESKAGMLQKKGSLELSADHMGADAKILASAFSG
SLTPPPFTSVAPFKECKMDVTSSALQQEHEDIQKERQAFSSTEEKVGKSREQKDSVDAPL
ESEAGRTISSGSSSSKTVEREDVEVGADPLSLFASETEDATSIQSQESARPFPPVVSRNL
ADEIEMYMSLQSPLNGKSSSMELQQGLNHKSVNCPDSPEIKQSLERRSSLPIGPVKIASL
TETPKRSPAVTRSKTFAVKSPKTPGSAGQRSSSLTALVKSSQSSSLGSVINSISGIKMDS
LLVGPKVDMLKSGMKQAANVASKMWDAVASAYSYSDDEEDSSQPRDSFPARLEEQLLSAE
GAIENTSPRGLMPGLASNGLTHSNTSLGSSSGSSDTSRAQLSTPLTPGRSMRGADSERSE
HSSSHHASTSSIYQNCALEVLMSSCSQCRSCEALVYDEEIMAGWTADDSNLNCTCPFCQI
SFLPLLHVEFHDLHSTPGFYLKSSTSGDSINSSSTHPATSGSSEVKVGCSSDPPDLMSFP
ESPENSKGPVEMPVTQTGTPKILVPEPVHSDPLGLMEKQAEKRNTLTRSNSVGGPLQSLD
SIQRPNHGISTTSLPNSLQEVADTLSQKWPNPKPVSVPYLSPLVLRKELESLLENEGDQV
IYTHKFLSQHPIIFWNLVWYFRRLDLPSILPGLILTSEHCNNGVQLPQTSLSQDSKLVYV
QLLWDNVNLHQEPTEPLYQLWRTFLQKKGTLAPTDHQETRTLLNSIVRSIQTNDVYGPIN
MLLREIRKRPEVKRQRSIYREIMFLSLVALGKENIDIEAFNREYRLAYSELSTEQLKVLS
PIDRPPNNSVQWCLKCFGAPFI
NT seq
5829 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggataagggtcaccgtgtcacagattacttcgtcgtggctggcctgacagac
aaatccacaccactagagcaggatctgtctgaagccaagtccagtgggcccaaggcaccc
atcacagaccttgccgtcatcaacaagtctgcaggagaaactgtgcctgaaggtttcaca
tgcattgagagtacctacagtggccagccggccaatctcaaccatggcagcctcaagagc
ccggaactcttcctgtgttacaaaagggctcgtgggaagcctccactcattgacatcggg
gtcctctacgagggtaaggagcgtcttattcagggttgtgaggtcattgaggccacacca
tttggccgctgtgcaaatgtcaacaacagctctgccacatcgcagcgcatattcattaca
taccgccgtgcaccccccgtccagccccagaactcgctggctgtgactgacatctgtgtc
atcatcacaaacaagggagagactcctcctcacactttctgtaaagtggacaagaacctc
aactgtggcttgtggggatcgagtgtatttttgtgttacaagaagtcagtgtctgcgtcc
aactccattgcttataaggctggtctgatctttcgctatcctgaggaggactatgaatca
tttcccctatctgagtctgtacccctcttttgcctccctatgggggcgaagattgagtgt
tgggctcctaacacacgctaccctttacctgtcttctccacatttgtcctcaccaactcc
aatggagaaaaggtgtatggagctggtatacagttctacgagccatatcctgtggacggt
ctcagcgagaagcaaaagatccagctaggtctggtgtccactgtggacaaaaaggtcata
cccgaccgcacagtcaacaccaacaagtgcatctgcctgctctcccgctggcctttcttt
gagtccttcaggaagttcctaatgtttctttacaagctgtcagccaatggagtcaaccct
ctgcccattgagaaacacatatcccatttcatgcacaatgtctcattcccttctcctcag
aggccaagaatattggtccagctctcggcacatgacaccttaatcctgtcccaacctgtc
tgtacacctttaccactaagtggagcagactacagcacactgctgatgaatctgggacca
gagaattgcgccacactgctacacttcatcctgctggaaagcaagatcctgttgcactca
ttgagaccagctgtactgactggagtggctgaggccgtcgtggcgatgatcttcccattc
cagtggcagtgtccttacatccctctttgccctctgtctctggcgggggtcctcaatgca
ccatgtcccttcattgtgggcgttgactctagatactttgacctctacgatcccccacct
gatgtggtttgtgtggacttggacaccaacactatatacttatctgatgaaaaaagaaat
agtaactggaagaacctcccaaagaagccctgcaaaagtctcatcaactctctaggaaat
cttcaccaccagcttatcactgttcggcgtacagctccagaaggcttggcggtagagatg
actcctattgaggcagactttacctggcataagaaaaagacagagctggagatggagatt
caagaggcgttcctgcgctttatggcatccatactgaagggctaccgaacctacctcaaa
ccaatcacacaagcaccttctgagaaagccactgctgcagactcactctatgacctgcaa
gggttcttaaagagtagagatcgtgcacatcagaagttctactctcagctcaccaagact
cagatcttcatccgcttcattgaggaatgcacatttgttagcgacaaagacaccagcttg
gctttttttgatgactgcattggaaaactttttccttccgacaaaggaacagaaaagggt
acaaaggttgaaggcgagtcatctgaggacaccaggctgatggaactagatgagtcacag
aagagtgagcacacagtcttcgtcatgcctccggaaccacccccagaagatggtcctgac
ccccctcttaaatatagttataaaaatttccctagtttacggttggagctgttcgatcgt
ccgcaagagctgagaccagcactgagtacaggagccgcaggggccagtgtgtccagcagc
cctgccctgttagccaagagaaccaaacaggaaatcaaaatggcctacaagctggcaaag
cgtttctattccaatccaccccagtgggcaaagtgtctgtttagtcactgctacagcctg
tggttcatctgtcttcctgccagtatgcgtacagcccaatccaagtctcgcaccatgcag
caggccttcaatgttctgctcaagatgaggagctctgaggtggaggtgcttgatgaggtc
tgttaccgtgtggtgatgcagttgtgtggtttgtgggagatgcccgtcatggctgtgcgt
gtcttaatggagatgaaaaaggctggtgttgaacccaatgcgattacttacggatactac
aacaaggctgttcttgaaagtccttggccaagtcgtaaccgtagcggactcttcatgtgg
accaaaatgcggaacctggtgcgaggagtggtacagtttaaacaggcattgcgtggaaat
acacttaaaggcggaccttctctgataactacagagctctcagcgagtgcagcagctgct
gctgatggagacagactgagtcatggcagtatagacagctcaaatgagcctattgcagag
cacattctgttccctcacagccatatagttgaggacgctattgacagtcactatattaca
gccggtcagtctgatcagggttatggatctaaggacgagctgccccaggaccttaccgat
ggacctgtaacttctccacctctctccaccaaccacactagcagtagcaaagcaaccaag
acccaaaatggggacgatattgctagttctgtggacagtgttgtagctgtgacggagccc
cccagccctgctgagacagcaccttctgtggccagcattgttaaactatctactgagatc
cccgttcactttgacagccctgcggacaggggagaaactgcaggtgtatgttcagctaag
ctcttcataccccgtaagaaaagtgaagatgtgtccctgccactggaggacgactctgca
atcccagtttcacaactctcccaggctggacagcagcagaggatgaaagcctttgtggag
cgcagctgcagcttcagtgcagagagcaaagctggcatgctacaaaagaagggcagtctg
gagctcagtgctgatcacatgggcgcagatgcaaaaatccttgcatccgccttctccggc
agtctgacgcctcctccatttacaagcgtcgctccctttaaagagtgtaagatggatgtt
acgagctctgcactccagcaggaacatgaagatattcagaaggagcgccaagcattcagt
tctacagaagagaaagtagggaaaagtagagagcagaaagattcagtagacgcacccctg
gagagcgaagctggccgaactataagcagtggctcttcctcctctaaaactgtggaaagg
gaggatgttgaggtgggggcagatcctctttcactctttgcatcagaaactgaggatgca
acctccattcagagccaggagtccgcacggccctttccgcccgtggtgtcaaggaatctt
gcagatgaaattgagatgtacatgagcctccagagccccttgaatggtaaatcttccagc
atggagttgcagcagggattaaaccacaaatctgttaactgtccagactctcctgaaata
aagcagtctttggaaagaagatcgagccttccgatcggtccggttaaaatagctagttta
acagagactccgaaacgtagccccgccgtcacgcgctccaagacatttgcagtcaagtcc
cccaaaaccccaggctctgctggtcaaaggtcatcatcgctgactgcgcttgtgaagtca
tcacagagcagttcactgggatctgtcatcaactccatatcgggcatcaagatggactct
ctgctggtagggcctaaagtagatatgctgaagtcaggcatgaagcaagcagccaatgtg
gccagcaaaatgtgggatgcggtggcatcagcgtactcctactcagatgatgaggaggac
agctcacagccccgagacagtttccctgctaggctggaagagcagttgctctctgcagaa
ggagcaatagagaacacatcgcccagaggtctaatgccaggcctggcctcaaacgggctc
acacacagcaacaccagcctgggcagcagcagtggaagcagcgataccagccgtgcacag
ctgtcgacacctttgactccaggccgctcaatgagaggtgcagactcggagaggtctgaa
catagttcctctcatcatgccagcacctccagcatttaccagaattgtgctttagaggtt
ctaatgtccagctgctctcagtgtcggtcttgtgaagctctggtgtatgatgaggagatc
atggcaggctggacagctgatgactccaatctcaactgtacctgtcctttctgtcaaatc
tcgtttctccctctactccatgtcgagttccacgacctgcactctacaccaggtttctac
ttgaagtcaagcacatcaggagacagtattaacagctccagcacacatccagccacctct
ggctcctctgaagtaaaagtgggttgttctagtgaccctccagatctcatgagcttccca
gaatctcctgagaacagcaaaggtcctgttgaaatgcctgtcactcaaactggaacccca
aagatccttgtaccagagccagtacattcagaccccctgggtctaatggagaaacaagcc
gagaaacgaaacactttaactcggagcaacagcgtgggcggcccattacagagtttggac
tcgatccaaagacccaatcatggcatatccactaccagcctgcccaacagcctgcaagag
gtagcggacaccctgagtcaaaagtggccgaacccaaaaccagtttctgtgccgtatctc
agtccactggtccttcgcaaagagttggaatcactgttagagaatgaaggggatcaggta
atctatactcataagttcctcagtcagcaccccatcatcttctggaacctggtttggtat
tttcgccgtttagacctgcccagcattctgcccggactcattctcacatctgaacattgc
aacaatggagtgcagctgccacagacgtctctgtctcaggacagtaagctggtgtatgtg
cagctgctgtgggacaatgtcaacttacaccaggagcccacagagcccctctatcagctt
tggaggaccttcttgcaaaagaagggcacactagcccccactgaccaccaggagactcgg
actctgctgaacagcattgtacgcagcattcagaccaatgatgtttacggccccatcaac
atgctcctcagggagatcaggaaacggccagaagttaaacggcagaggagtatctacagg
gaaatcatgtttctgtcacttgttgccttaggaaaggagaacattgatattgaggccttt
aatcgtgaatacaggcttgcatacagcgagctcagcacagaacagctgaaagtcctgtcc
cccattgacagaccacctaacaacagcgtgcagtggtgcctcaagtgcttcggagccccc
ttcatctga
DBGET
integrated database retrieval system
