Puntigrus tetrazona (Sumatra barb): 122348350
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Entry
122348350 CDS
T08985
Symbol
zcchc7
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122348350 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122348350 (zcchc7)
03016 Transfer RNA biogenesis [BR:
ptet03016
]
122348350 (zcchc7)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
122348350 (zcchc7)
Transfer RNA biogenesis [BR:
ptet03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
122348350 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
zf-CCHC_3
Zn_ribbon_2
Motif
Other DBs
NCBI-GeneID:
122348350
NCBI-ProteinID:
XP_043099656
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All DBs
Position
1:complement(12499771..12544141)
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AA seq
569 aa
AA seq
DB search
MFSGFQKWDDYEDELYQDDEDSSLSDTNSELEFQLYSQLHYSAEIQEDPEDSREVQSSVP
PTRTQQKPLPPAPPVDVIVIDSGTDAITVSDNTEDDDSVCNRKGQSSSKLWNRKLQTHSL
LSPSLPQVQARRSSPVDVVVLNSDSDDSSESVPPFVEDLDSDSDGTENWMILGLDKQDGD
QNIQLNLSVEEHANDEENKQIWAVSKKDKEAQIFNKGFSRRRLSGRYYAEKSITCHNCKK
SGHLSKNCPTPKKVPCCSLCGVQGHVLRICPNRYCSNCSLPGHISDNCLEKAYWHKRCHR
CDMTGHFSDACPEIWRQYHITTTKGPLCKASDPEASRKPAYCYNCSMKGHFGHECTRRRM
YNGTYPTLPFISRYDTKDHFHFREIRIEKQARELERAGLLSPDRAVVIHTPQPPKKKQKT
SHKQSPYPYSAHSNNQYTPKRRIAHTPKHTHFNVQKNHGKHTPKFNEAKKKKKVKSKTQS
EVIVIDEDADFPRGCKKSLHKTRDVSSANVKPKKFFGKEKNNKKDKITKKKERKWQKRER
KAAKDSSMYPSDENLFLIKQRKVKGRKNI
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgttctcagggtttcagaagtgggatgactacgaggacgagttgtaccaggacgatgaa
gactcgagtttgtctgacactaacagtgagctggagttccagctttattcccaactgcac
tacagcgctgagatccaagaggatcccgaggactcgagagaggtccagtcatcagtacca
ccgactcgaacacagcagaaacccttgcctcctgctccacctgtagatgttatcgtgatt
gactctggcacagatgccatcacggtgtcagacaacacggaggacgatgacagcgtctgt
aatagaaagggtcaatcgtcatcaaaactttggaacaggaagttgcagacccatagcttg
ctttcgccctctctgccacaagttcaagcaagaaggagctccccagttgatgttgttgtg
ttgaattctgattcagacgactcttctgaatctgtacctccttttgtggaggatctggat
tcggactcggatgggacggagaactggatgatcctgggcctggacaaacaggatggagat
cagaacatacagctcaacctctccgtagaagaacatgcaaatgatgaagagaataaacag
atctgggctgtgtcaaaaaaggataaagaggctcagatctttaataaagggttttcccgg
aggcgtctttcaggccgttactacgctgaaaaatccatcacgtgtcacaactgcaaaaag
tccggccatctctccaaaaactgccccacaccaaagaaggtgccgtgctgctcattatgt
ggggttcagggacatgttctgaggatttgtccaaaccgttactgttctaactgctctctg
cccggccacatcagtgacaactgtctggagaaagcttactggcacaaacgctgccaccgc
tgtgacatgactggacacttctctgacgcttgcccagaaatctggagacagtatcacatt
acgaccactaagggacctctctgcaaagccagtgatccagaggcctccaggaaacctgct
tactgttataactgctctatgaaaggacacttcggccatgaatgcacccggaggagaatg
tacaacgggacgtatcccaccctgccatttatttcccgttacgacacgaaggatcacttc
catttccgggaaattcgaatcgaaaagcaggccagagaacttgagcgagccggattgctt
tcacctgacagagccgtcgttatacacaccccccaacctccgaaaaagaaacaaaaaacc
agccacaaacagtctccatacccatacagcgctcacagcaacaaccagtacacaccgaaa
agacgcattgcacacacacccaaacacacacacttcaacgtccagaagaaccacggcaaa
cacacccctaagtttaatgaagccaaaaagaagaaaaaagtaaaaagcaaaacacaatct
gaagtcattgttatagatgaagatgcagactttcctagaggttgcaaaaagagccttcac
aagacaagagatgtttcatcagccaacgtgaagccgaagaagttcttcggaaaggaaaag
aacaataaaaaggacaaaataacaaaaaagaaggagaggaaatggcaaaagagagaacgg
aaagctgctaaagattcttccatgtatccctctgatgaaaacctttttctgattaagcaa
agaaaggtaaaaggtaggaaaaacatttaa
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