Puntigrus tetrazona (Sumatra barb): 122348577
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Entry
122348577 CDS
T08985
Symbol
si:ch211-186j3.6
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptet04515
]
122348577 (si:ch211-186j3.6)
Cell adhesion molecules [BR:
ptet04515
]
Cadherins
Cadherin related
122348577 (si:ch211-186j3.6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_pro
EGF
Cadherin_4
hEGF
EGF_2
Big_9
cEGF
He_PIG
Motif
Other DBs
NCBI-GeneID:
122348577
NCBI-ProteinID:
XP_043100090
LinkDB
All DBs
Position
7:complement(26768961..26957250)
Genome browser
AA seq
2903 aa
AA seq
DB search
MFWTILLSCFATFVLGNKTDERIPFFHGHVFENSPPGSKVNGLSIPVKRIDPQRWCSKSG
MHLKLLGDRSEDFHVFAHHKRGHILLKTSNVLDREERAEYLLSLALCCQSCASAVRVVAE
VASIKVDVLDTNDHEPTFRHADVKITLDDATALRSVVYTVKAEDIDSGKNAELIYYALPR
NGSFYVVPKTGDILLVDSILGLAQPIKFSVFARDHGWPARTSQNMDVEISPRQWPALPQI
DSGLSRKSRSVPEPVLITVSEDASIGSVIMNLHPVRFQSASFELIHPDADNSPVTVSRDS
GDLVISRRLDRETQPIVEITVKVQDKRGPDWYTVRVDLTVMDVNDNAPEWTMVPFPYLSV
VSANAQPNTLVYKLQARDGDEGVNGEVEYFLSDGGDGRFEVDRKNGHVRTTGLPLQRDRE
YLLTVMAADRQGSRSPPAVVSIIAGPRAPQFTNVSYTISIPENTPEGQPFLVTPAVSFQK
QPVTYSLLINPSSLFSIQPETGEISLTRTVDYESDQHRYLLLVRAGENQDILSSAAEVRV
IIIDENDCVPEFQQSIYSKDGVPETVTTATSLLQVSASDCDSEQNADVTYYTLSPDFIIS
AHGTIFPAGPLDYERSNHLYEFVVMAVDKGEVPRTGTATVRLRMANVNDESPEFSQPVYR
TFVSEDAGPNTLVATVLAKDPDGDGITYKITAGNEEGNFVIDSQKGLIRLRSSPSPRLQG
VKYVLNVTATDDNASGGPQSLSTIAQVIVGVDDVNNNKPVFEKCAEYKEKASVLENKPAG
TFVLQVHADDADEGANGKVTYGFMHKDSTVPAFSIDPETGVIVTAMAFDRERQREYAVTV
TATDQAADPLIGICQLNILILDENDNSPKFENLRYEYFLREDTMIGTSFLRVAAHDDDYS
TNAAITYSMSEEQPEYLRVNPLTGWIYVNQPISQRTYISRQVIATDGGNRSSSVELAVTI
TNVKNQPPQWEKDKYEVTIPENTVRDTPVVTIKATSPLGDPRVTYNLEDGLVPESNMPVR
FYLTPNREDGSASILVAEPLDYETTRNFMLRVRAQNVAPVPLAAFTTVHINITDVNDNVP
FFTSSIYEASVTEGAEIGTLVLQVSANDLDLGLNGKISYSLLNDRSGDYQYFRIDPELGT
IYTEAVFDRETKGSYLLEVKSVDGWESARPGKHGQPNSDTAYVRIFISDVNDNKPVFAQS
VYEVDVDEGADVGSTILTVSANDEDEGANAKLRYQITSGNVGGVFDMEPEVGTIFIAQPL
DYEQNKLYKLHVLASDGKWEDYATVIVTIVNKNDEAPVFSVNEYYGSVTEELDGSPVFVL
QVTASDPDKDADQEALRYSLHGQGAESEFIIDEVTGKIYAQRTLDREARAVWRFVVLATD
EGGEGLTGFTDVIINVWDINDNAPLFACAPDSCNGDVAENSPPGTSVMEMTATDLDDAAV
GQNAVLAYRIVGNAALNGANSGADVFNINPATGTVSVAMSGLDREQTDSYILVVEARDGG
GMIGTATATIHVTDINDHVPRFLDRSCSVRIPESSEPNTPIIELAAEDSDAGENGQLTFS
VVAGDPEQKFYMVSHRQEQRGTLRLKKHLDYERPGEQRFNLTIKVEDMQYSSLLHCTLEV
EDCNDHVPVFIPHFLQLPAVREDVAPGTSLASVAASDLDSGLNREITYSISPESDPYHLF
SVDQSGLVTVASELDREKVAQHHLVVLATDHGNPPLTGTATIQMALLDVNDNGPEFEAAY
APVVWENVLGPQVVRLNQSSTLLRAVDRDSEENGSPFSFSVPLEYRYSNDFHLQDNGNDT
ATITALRAFDRERQKEFLLPVIMTDSGSPPKTVTNTLTITIGDENDHAHVAGQKKVFINC
HRGRMPTNVLGKVYSPDPDDWDNKTYAFEGYVPNYFILNKRTGFLIIKETAPPGSYEFQV
RVSDEVWPDAISNVKVNVRELRDDAIYNSASLRLADISTTEFMERRGNLKSRYELLGDFL
SDMLSVGADNVNIFSLVEVRHRTLDVRFSVHSTPFLRAERVHGYLAAHKQKLQSFLQVNV
TQVHVDECVDADCRGGGGCTSHLSVTDKPAVVDSGSMALVSVTVEATAVCSCSAREHLHQ
GCSVYPRNPCHNGGVCVDTQSGYRCQCPAQFEGPECQQTKHSFHGNGYAWFPPIRPCFES
HLSLEFITEVADGLLLYSGPLSQLQPWEPEDFMAIELIDGTPTLKINHGSGTLVLQLPGN
VNVADRRWHRLDVRSNSKEVRFTLDRCAGATIMEMEGVGSWLTTEDHTSCEVTGITPNMD
KHLNVTQVLQLGGVNENLPYIYPQLQHKHFTGCIRNLIVDSKFYDLGSPADSSGSAPGCL
MTDNSCVNMGFPSCGTRGRCHGEWGSFSCQCIPGYSGHQCEKEVPEYSFDGRSHIHFQLA
FTLPARHTQVQVLVRTRKHSSSLLSLLSKEQNEYLKLEIYQGLLSVFYNLGDGDFNLTMP
SYRLDNGEWHDIHLDRHDNELTLRLDGGGGRREVTGSPSRSREIVIDPAVVMLGNSFPSG
HNKSFQGCMRDLRLNGRFIPLDGQAREGVSLVSSQGVSLGCSSDSCRKNQCSPPFTCVDL
WRIHECRCPPGHMVKANSTGKFCVYTLCASRPCHRGTCVAQSPSKFTCHCPEGYRGRHCE
VTLAIYRDDVGLSFSSLFAICICFMALLVLLLGIFLYTRWRSYKGLKEGVYHVSAHHDGW
EDIRENVLNYDEEGGGEEDQNAYDMAELQKSLQPSPAQSVQYSRSRAIHHHHPPSQQQQQ
HFCQPDPPSRAGTATTTTSSISSGGATIRRDVPPCHSPAQGQTANPSRAAQLARKSLSFS
SQDLARYLCEIIRDADQHPETAPFDSLQVFSTEGGGSLAGSLSSFSSAGLEEGTAAGHEC
LKEWGPRFEKLKALYERAEGSDL
NT seq
8712 nt
NT seq
+upstream
nt +downstream
nt
atgttttggactattttgttgtcatgttttgcgacttttgtgctgggaaataagaccgac
gagcgaatacccttcttccacgggcatgtgtttgagaactctccacctggctccaaagtg
aacggactgagtatcccagtgaagcgcatcgatccgcagcgatggtgctctaagtccggg
atgcacctgaaactcctgggggacaggagcgaagattttcacgtcttcgcgcaccacaag
cgaggacacatattgctgaaaacctctaacgttctcgatcgagaggagcgcgccgagtat
ctcctcagtctggcgctgtgctgtcagagctgcgcttcagccgtgcgcgtcgtggccgaa
gttgcttcaattaaagtggacgtgctcgacacgaacgaccacgagcccactttccgacac
gcagacgtcaaaataactttggacgacgccactgccctgaggtcggtggtctacacggtg
aaagcggaggacatcgacagcggcaaaaacgccgagctcatatactacgcgctccctaga
aacggcagtttctatgtggtgcccaaaaccggcgacatcctcctcgtggactcgattctg
ggtctcgcgcagcctataaagttcagcgtgtttgcgcgagaccacggctggcccgctcgg
accagtcagaatatggatgtagagatcagtccgcgccagtggccagcccttcctcagatc
gatagcggactctcgagaaagtcccgctccgtgccggagccggtgcttatcaccgtgtcc
gaagacgcgagtatcggctccgtcataatgaatctacacccggtgaggtttcagtccgcc
agttttgagctgattcacccggacgcggataactctcccgtcaccgtaagtcgggacagc
ggagatttggttatatcgaggcggcttgaccgagagacgcagccgatagtggagataacc
gtaaaagtacaagataagcgaggtcctgactggtatacagtgagagtggatttgacggtg
atggatgtcaatgataatgccccagaatggacaatggtccctttcccctacctgagtgtg
gtctctgctaatgcccaaccaaatacgctagtatacaagcttcaagccagagatggtgat
gagggcgtcaatggagaggtggaatacttcctgtctgatggaggtgacgggagatttgag
gtggacaggaagaacggtcacgtgcggacgacaggcctccccctgcagagagacagagag
tacctgctcacggtgatggctgctgatcggcagggcagccgcagtcctcccgctgtagtg
tccatcatcgcaggcccacgagctcctcaattcaccaacgtgtcttacacaatttccata
ccagaaaacacaccagaaggccaacccttcctcgtcaccccagcagtgtccttccaaaaa
cagccagtaacttacagcctgctaatcaatcccagcagtcttttcagcatccagccagag
acgggagagatcagtctgactcgtactgtagactatgagagtgaccagcaccgctacctg
ctgctggtgcgggccggggagaatcaggacattctcagcagtgctgcagaggtgcgagtg
atcatcattgatgagaatgactgtgttccagaattccagcagtccatttatagcaaagac
ggtgttcctgagacagtcacgactgcaacgtcactcctgcaggtatcagccagcgattgt
gattcggagcagaatgcagatgtcacgtactacacacttagtccagatttcatcatttca
gcccatggcaccatattcccagcaggccctctggattacgaaaggtccaaccacctgtat
gaatttgtggtgatggcagtggataagggcgaggtgccccgcaccggcacggccaccgtg
cgccttcgaatggccaatgtcaacgacgagtctccggagttctcgcagcctgtgtatcga
acctttgtctctgaggacgcggggcccaacactctggttgcgactgtgctagccaaggac
ccagatggagatgggatcacatacaaaattacagcaggcaatgaggagggcaacttcgtc
atcgacagccagaaaggattgatccgtctccgctccagcccatctcctagacttcaggga
gtaaagtacgtcctgaacgtaacagcaacagatgacaacgcctccggtgggccgcagtca
ctctccaccattgcccaggtcattgtaggagttgacgatgtgaacaacaacaaacctgtg
tttgaaaagtgtgccgagtataaagagaaggcatcagttctggaaaataagccagcggga
acatttgtgctgcaggtccatgcagatgatgctgatgaaggagccaatggaaaagtcaca
tatggttttatgcataaagacagtacggttcctgctttcagcattgatccagaaacaggt
gttattgtaactgccatggcgtttgatcgggagagacagagagagtatgcagtaacagtg
acggccacggaccaagcggcggaccccctcataggcatctgccagctcaacattcttatc
ctcgacgagaatgacaacagccccaaatttgaaaacctgcgctacgaatacttcttacgt
gaagacaccatgatcgggaccagttttctccgagtggctgcacatgatgatgattacagc
actaatgcagccatcacttactccatgtccgaggagcagccggagtatctccgagtcaat
cccctcactggctggatctacgtaaaccaaccaatctcgcagaggacctacatcagcagg
caggtcatcgctacagatggagggaatcggagcagttcagtagagctggcagtcaccatc
actaacgtgaagaaccagcctccacagtgggagaaggacaaatatgaggtcaccatacct
gaaaacactgtcagagacactccagttgtgacaatcaaggccacttctccactgggcgac
ccgagggtgacttataacttggaggatggattggtgccagaaagcaacatgcctgttcgt
ttctacctaactccgaatcgtgaagacggctctgcctctatacttgtcgcagagcccttg
gactatgagactacccgcaacttcatgcttagggttcgagctcagaacgttgctcctgtt
cccctggcggccttcacaactgttcacataaacatcacagatgtcaatgacaacgttcca
ttcttcacttcctccatatacgaggcatctgtgactgaaggggcggaaattgggactttg
gttctccaagtgtcagccaatgatcttgacctgggactcaatgggaagatctcatactct
ctactgaatgaccgtagtggagactatcagtacttccgcattgatcccgagctgggcacc
atctacacggaggctgtgtttgatcgagagaccaagggatcctaccttttggaggtgaag
tcagtagatggctgggaatcagccaggccagggaagcatggacagcctaattcagatacg
gcgtatgtgcgtatttttatcagcgacgtgaacgataacaaaccggtgtttgcgcagtcc
gtgtacgaggttgacgtggatgagggcgctgacgtgggctccaccatcctcacagtcagc
gctaatgatgaagatgaaggtgctaatgccaagttgcgctaccagattacatcaggcaat
gtgggaggtgtttttgacatggagcccgaggtgggaaccatcttcattgcccagccgctg
gattacgaacagaacaagctctataagttgcacgtcttggcgtctgatgggaagtgggaa
gattacgctactgtaatagtcaccattgtgaataagaacgacgaggcacctgtgttctca
gtgaacgagtactatggaagcgtgacggaggagctggacggttctcctgtctttgtgttg
caggtaacagcatctgacccagataaggatgctgaccaggaggctttgagatactccctt
catggtcaaggtgctgagagtgagttcatcattgacgaggtgacggggaagatttatgct
cagagaacattagaccgtgaagcccgggcagtgtggcgttttgtcgtcctggccacggat
gagggcggcgagggactaacaggattcactgatgtcataataaacgtgtgggacataaac
gacaatgctcctctttttgcctgtgccccggatagctgcaatggagacgtggctgagaac
tcccctcctggcacttccgtcatggagatgacagccactgatctggatgatgcagctgtc
ggacaaaatgcagtgttggcctatcggatcgtaggtaacgccgcccttaatggcgctaat
agtggagcagatgtgttcaacatcaatccagctactgggacggtttcggtggcaatgtct
ggcctggacagggagcagactgattcatatatcttggtggtggaggcacgagacggtgga
ggtatgataggaacggccaccgccactatacacgtgacagacatcaacgaccacgtccca
cgtttcctggaccgctcatgctcagtacgcatccctgagagcagtgaaccaaacacacca
atcatagagcttgccgcagaggattcagatgctggagagaacggacagctgaccttcagt
gtggtagccggtgatcccgaacagaagttttacatggtgagccatcgacaggaacagcgt
gggacccttcgtctcaaaaaacatctggattacgaaagaccgggcgaacaacgcttcaac
ctcaccatcaaagtggaggatatgcagtactccagcctgcttcactgcacccttgaagta
gaagactgcaatgaccacgtgccagtattcattcctcactttctacagctccctgccgta
cgagaggatgtcgctccaggaaccagcctggcaagtgttgctgccagtgatttagactcg
gggttgaatcgtgagatcacttatagtatttctccggagtctgatccttaccatctgttt
tctgtggaccagtcggggttggtcactgtggctagtgagctggaccgggaaaaggtcgca
cagcatcatttggtcgtacttgcgacagaccacggcaacccaccgttgactggcactgca
actatccagatggctctgctggatgtcaacgacaatggccctgagttcgaggcagcgtat
gcaccagtagtgtgggagaatgttttgggcccgcaggttgtacggcttaaccagagctcc
acgttactgagagccgtagaccgagattcagaggagaacggctcacccttttctttctcc
gtgcctctggagtatcgttacagcaatgatttccacctgcaggataatgggaatgacacg
gccaccatcaccgccctgagagccttcgacagagagagacagaaggagtttctactacct
gtcatcatgaccgatagcggtagtccaccaaagaccgtcacaaacaccctcactatcacc
atcggagacgagaacgaccacgcccacgtagctggacagaagaaagtattcatcaactgt
cacagagggagaatgccaaccaatgtactggggaaggtctactcaccagatccagatgac
tgggataacaagacgtacgcctttgagggatatgttcctaattattttatcctgaacaag
cggacagggttcctcatcataaaggagactgctcctcctgggagttacgagtttcaggtt
cgagtgtcagatgaggtatggccggatgccatctctaacgtgaaggtgaatgtgagagag
ctacgagatgatgccatctacaactctgcctctttgagattagcagacatctccaccaca
gagttcatggaacgccgtggcaatctgaagagcaggtacgagctgctgggcgacttcctg
tcagacatgctgtctgtgggggcagacaacgtcaacattttcagtctggtggaagtgcgg
cacaggactctggatgtgaggttctccgttcacagcactccgttcctcagggccgagaga
gtccatggttaccttgcagctcataaacaaaaactccagtcttttcttcaagtcaacgtg
acccaggtccacgtagatgagtgtgtggatgcagactgtcggggaggaggaggctgcacc
agccacctgagcgtgactgacaagccggcggtggtcgactcgggcagcatggctctggtg
tcagtgactgtggaagccacagctgtctgcagttgctcagcacgtgaacatctccaccag
ggctgctctgtctatcccagaaacccctgccacaacggaggagtttgtgtggacacgcag
agcggatacagatgccagtgccctgctcagtttgagggacccgagtgccagcagacaaaa
cacagtttccatggcaacggctatgcttggtttcctcctataaggccatgcttcgagagc
cacctctcgctggagttcatcacagaggtggcagatggcttgctgctctacagcggaccc
ctctcccagcttcagccgtgggagccggaggacttcatggccatagaactgatcgacggc
acccccaccctgaaaattaaccacggctcgggtacattggtcctgcagttgccgggcaac
gtgaacgtagcggacagacggtggcacagactggacgtgaggagcaacagcaaagaggtg
cgttttacacttgaccgctgcgcaggagccactatcatggagatggagggagtgggcagc
tggctaactactgaagaccacacttcctgtgaagttactggcatcacaccaaatatggac
aagcatctgaatgtgacgcaggtgcttcagctaggaggagtgaatgagaacctgccgtat
atctacccgcaactacaacacaagcactttactggctgtattcgaaacctcatcgtggac
agcaagttttatgacctgggttcgccggcagactcctctggcagtgctccgggatgcctg
atgacggacaatagctgtgtgaacatgggctttccttcctgtgggacgcgggggcgctgc
cacggagagtggggttccttcagctgtcagtgcatacctggatacagcgggcatcagtgt
gaaaaggaggtcccagagtattcttttgatggaaggagccacatacactttcagctggcc
tttacgctcccggccagacacacgcaggttcaggtcctggtccggacacgtaaacatagc
agctccctcctcagcctgctatccaaagaacagaatgaatatctcaaactggagatctat
cagggtctactaagtgtcttctacaacctcggtgatggggacttcaacttgacaatgccc
tcttatcgtttagacaacggagagtggcatgacattcacttagatcggcatgacaatgag
ttgaccctgcgtctggacggtgggggagggcggcgagaggtcacgggttcaccgagtcgc
agtcgggagattgttattgatcccgctgtggtgatgctgggcaactcattcccctcagga
cacaacaagagcttccaaggctgtatgcgggacctgagactcaatgggcggtttattcct
ctggacggtcaggccagggagggggtgtccttggtcagttctcaaggcgtgtctctgggt
tgttcttctgactcctgccggaaaaaccaatgtagtcccccctttacttgcgtggacctg
tggagaatccatgaatgcaggtgtcccccgggtcacatggtcaaagcgaactccactggt
aaattctgcgtgtacacgctctgcgccagccgtccgtgtcacaggggcacttgtgtggca
cagtccccatccaaattcacatgccactgtccagagggctaccgcggccggcactgtgaa
gtgacactggccatctacagagacgacgtgggcctcagtttcagctccctcttcgccata
tgcatctgctttatggccctactagtgctgctgttggggattttcctgtacacacgttgg
aggagctataaggggctgaaggagggggtatatcacgtgtctgcgcaccatgacggatgg
gaggacattcgagagaacgtgctcaactacgacgaggagggcggtggggaggaggatcag
aatgcctatgacatggcagagctccagaagtctctgcagcccagcccggcccagtcggtg
cagtacagccggtcgcgagccatccaccaccaccaccctccttcccagcagcagcagcaa
cacttttgccagcctgaccccccctccagagcgggcacagccaccaccaccacctcctcc
atctcatcgggaggagccactatccgtagggatgtacccccctgccactctccggctcaa
ggccagactgcaaatcctagccgagcagcccagctggcccgcaagagcttgtcgttctcc
agtcaggacctggcccgctacctgtgtgaaattatccgtgatgccgaccagcacccggag
acagcgcccttcgactctctgcaggtcttctctactgaggggggcggctcgctggccggg
tcactgagttccttcagctccgctgggctggaagagggaactgcggcaggtcacgagtgt
ttgaaagagtgggggccacgctttgagaagctgaaagccctctacgagcgggccgagggc
agcgacctctaa
DBGET
integrated database retrieval system