Puntigrus tetrazona (Sumatra barb): 122348652
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Entry
122348652 CDS
T08985
Symbol
rorab
Name
(RefSeq) nuclear receptor ROR-alpha B isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122348652 (rorab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ptet03310
]
122348652 (rorab)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122348652 (rorab)
Nuclear receptors [BR:
ptet03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
122348652 (rorab)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
122348652
NCBI-ProteinID:
XP_043100254
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Position
7:complement(16753897..16786320)
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AA seq
528 aa
AA seq
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MNMESPPESVASPRKSASEADASVEDSPVKLDSKAEPDKPAPVRRHSCSSTNKDVSSAKK
THTSQIESIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQGTVSYSCPRQKSCLIDRTSR
NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLFAEVQKHRQQQQEEKVSDDTEKGREP
QPPGEAEPLTPSYALSTNGVTELPDDLSGYVNGQTPEEGKADSAIGGFYLDIQPSPDQSG
LDMDGIKLEPVCDLSSDSGLDQYCCYSNGDSSPPDNDLEHMSENICKSHMETCQYLREEL
QPSNWQTVLQTDLDAYQKKSQEDMWQLCAVKVTEAVQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFVRMCRAYNSQNNTVFFDSKYAGPEVFKALGCDDLISSVFEFAKSLNSLQL
SEDEIGLFSAYVLMSADRSWLQEKSRVEKLQEKIKIALQNLLQKNQRDEGILAKLVCKVS
TVRMLCRRHMEKLSTFRALYPETVHTRFPPLYKELFGSDFEQVLPQEA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggagtctccgccagagtccgtcgcgtcgccgcggaagagcgcttctgaagcg
gacgcttcggtggaggacagcccggtgaaactggacagcaaggctgagcccgacaaacca
gcaccagttcggcggcacagttgctcaagtaccaacaaggatgtgtcctcggcaaagaaa
acgcacacgtctcagattgagagtattccctgtaaaatctgtggagataaatcatcaggg
attcattatggtgttatcacgtgtgagggatgcaagggtttcttcaggaggagtcagcag
ggcactgtgtcatattcatgtcctcggcagaagagttgtctgatcgaccgtaccagcaga
aaccgctgccagcactgtcgcctgcagaaatgcttagcagtgggcatgtcaagagatgct
gtgaaatttggccggatgtccaagaagcagagggacagcctgttcgcagaggttcagaaa
caccgtcaacagcagcaggaggagaaagtgagtgatgacacagagaaggggcgggaacct
caacctccaggagaggcagagccactcacgccctcttacgccctgtccaccaatggcgtc
acagaactcccagatgacctcagtggatacgtgaatggtcagaccccagaggagggaaag
gcagattcagcgattggtggattttacctagacattcagccctctccagaccagtcaggt
ctagacatggatggcattaaactagaacctgtgtgcgacctcagctcggactctggctta
gatcaatattgttgctatagcaatggagactcttcacctcctgacaatgacctagaacat
atgtcagagaacatctgcaagtctcacatggagacgtgccagtatcttcgagaagagctt
cagcccagcaactggcagacagtcttacagaccgacctggacgcgtaccaaaagaagtct
caggaggacatgtggcagctgtgtgcggttaaagtcactgaagccgtgcagtatgtggtt
gagtttgccaagcgcattgatggattcatggagctctgtcagaacgatcagatcgtgctg
ctcaaagcaggatctttagaagtagtgttcgtgaggatgtgtcgggcatataactcccag
aacaacactgtcttttttgacagcaaatacgctgggccggaggtctttaaagcattgggc
tgtgatgatcttatcagctccgtgtttgagtttgcgaagagcctgaactctctacagctc
agcgaagatgagatcggcctgttttcagcatatgtgctgatgtctgcagatcgctcctgg
ctgcaggagaagagcagagtggagaaactccaggagaagatcaagattgccctccagaac
ctcctgcagaagaaccagagggatgagggaattctcgcaaagcttgtctgtaaagtgtcc
actgttcggatgttatgccgtcgccatatggaaaaactgagcacgttcagagctctttac
ccagaaacggtccacacacgcttccctcctctctataaggagctgtttggctcagacttt
gagcaggttctgcctcaggaggcctga
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