Puntigrus tetrazona (Sumatra barb): 122348786
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Entry
122348786 CDS
T08985
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04136
Autophagy - other
ptet04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122348786 (atg13)
04136 Autophagy - other
122348786 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122348786 (atg13)
03029 Mitochondrial biogenesis [BR:
ptet03029
]
122348786 (atg13)
Membrane trafficking [BR:
ptet04131
]
Autophagy
Autophagosome formation proteins
ULK complex
122348786 (atg13)
Atg1 complex
122348786 (atg13)
Mitochondrial biogenesis [BR:
ptet03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122348786 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
122348786
NCBI-ProteinID:
XP_043100580
LinkDB
All DBs
Position
7:complement(22105561..22114501)
Genome browser
AA seq
536 aa
AA seq
DB search
MDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKISTCSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGDVQLTGLGEGFQTVRVGIVGTPI
GTITLSCAYRTNLALMSSRQFERTGPIMGIIIDHFVERPFTNMAHMHPCSYRAPGEDEGG
TYAGIEDSQEVCTTSFSTSPPSQCVCTVSQAHFKTPKPTLMATLKVPLMGLGISQQLYSS
RLSYQTPALGTVDLCHPTACAAPAHPHQMVVPSKEGGVPQVPAQPNHGTAAEHGRIPSCP
TGQSPQLAPPASCSSEVKTASPSDALETTFTRKVGAFVNKATTQVTTTSLDLPFAAFAPR
AYDLEENDPMVHPPLSPAPSSPLQGSLHSNNSSQSGGQPQDDFVMVEFKPAFSKDDLLPM
DLGTFYREFQNPPQLASLSIDVSAQSMAEDLDSLPEKLAVYEKNIDEFDAFVDTLQ
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgatctgagcccacaggacaagaaagacttggataaattcatcaaattcttt
gccttgaagacagtgcaagttatagttcaagcccggcttggagagaagatcagcacttgc
tcatcttcgtcaccgacaggatcagactggtttaatctggcaataaaagacatcccagag
gtgactcatgaagcaaaaaaagctcttgctggacagctacctggcatcggccgatccatg
tgtgtggagatctccctcaaaacctcagagggggactccatggagctggagacgtggtgt
ttggaaatgaatgaaaagtgtgataaggacattaaagtgtcctatacagtttataatcgg
ctgtctctgctgctcaagtctttgctggccatcacaagggtgacacctgcttacaagctt
tcacgtaaacaagggcatgactatgtcatactctacaggatctattttggagacgtccag
ctgacaggtctcggggaagggttccagacagtgcgagtgggtattgtaggcactcctata
ggcaccatcactttatcctgtgcatatcgcactaatttggcccttatgtcttcaaggcaa
tttgagaggacaggccctatcatgggtatcatcattgatcattttgtggagcgccccttc
actaatatggcacacatgcatccctgcagttacagagcacctggagaagatgagggaggg
acgtatgcaggaatagaagactctcaggaagtgtgcaccacgtccttttccacctcccca
ccatcacagtgtgtgtgtacagtaagtcaggcacattttaagacacctaagccgactctg
atggccacactgaaggttcccctcatggggcttggcatctcacagcaactgtacagctct
cgcctgtcctatcagactcctgccctgggaactgtggatttgtgtcatcctacagcttgt
gctgctcctgcacatcctcaccagatggttgtgcccagcaaagaaggtggagtaccacag
gtgccggctcagcctaatcatggcactgcggccgagcatggtcgtatcccttcatgcccc
actggacaatcccctcagctggcaccacccgcatcctgtagtagtgaggtgaagacggcg
tccccctctgatgctctagagaccaccttcaccaggaaagttggggcttttgtcaacaaa
gctaccactcaggtgacaacaaccagtttggatcttccttttgctgcattcgctccaaga
gcctatgatctagaggagaatgacccaatggtgcaccctcctctttccccggctccttca
tctcccttgcaaggcagcctgcactcaaacaactcgagccaaagtgggggccaaccgcaa
gacgactttgtcatggttgaatttaaaccagcattctctaaggatgaccttctgccaatg
gatctgggaactttctatagagagtttcaaaaccctcctcaactcgcaagcctgtccatt
gatgtcagcgcccagtctatggctgaagatttggactctcttccagagaaactggccgtt
tatgagaagaacatcgacgagtttgatgcatttgtggacacgctacaataa
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