Puntigrus tetrazona (Sumatra barb): 122349138
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Entry
122349138 CDS
T08985
Symbol
tars1
Name
(RefSeq) LOW QUALITY PROTEIN: threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122349138 (tars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ptet01007
]
122349138 (tars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptet03016
]
122349138 (tars1)
Enzymes [BR:
ptet01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
122349138 (tars1)
Amino acid related enzymes [BR:
ptet01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
122349138 (tars1)
Transfer RNA biogenesis [BR:
ptet03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122349138 (tars1)
Prokaryotic type
122349138 (tars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
122349138
NCBI-ProteinID:
XP_043101021
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All DBs
Position
7:2284442..2293236
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AA seq
718 aa
AA seq
DB search
MADESVTEQLKDLKMDEKKNSKDGGKKKNKNAGGDAGGRAELNPLPEYIDERLSIYSKLK
AEHDALLSDKAAKDSKPIKITLPDGKVVDGESWKTTPYQVACGISQGLADNTVISKVNNV
VWDLDRPLEEDCSLVFLKFDDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIENGFYY
DMFLENEGVSSNDFPCLETLCKKIIKEKQPFERLEVKKETLLEMFKYNKFKCRILNEKVT
TPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMESLQRIYGIXFPDP
KMLKEWEKFQEEAKNRDHRKLGREQDLFFFHDLSPGSCFFLPKGAYIYNTLIEFIRSEYR
KRGFQEVVTPNIYNSKLWQTSGHWQHYSENMFSFEVEKEIFALKPMNCPGHCLMFDHRPR
SWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSMDQIESEIKGCLNFLRT
VYDVFGFTFKLNLSTRPEKFLGEPEVWDQAEKQLENSLNDFGEKWVLNPGDGAFYGPKID
IQIKDAIGRYHQCATIQLDFQLPIRXNLTFVSHDGDDKKRPVIIHRAILGSVERMIAILT
ENYGGKWPLWLSPRQVMVVPVGPTCDEYAQRVQKEFHRGGLMTDVDLDPGCTLNKKIRNA
QLAQYNFILVVGEKEKTSDTVNVRTRDNKVHGERSLTDCMERLKELKASRSRNAEEEF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgagagcgttaccgaacagctgaaggacctgaaaatggacgagaagaagaat
agcaaagacggaggaaagaagaaaaacaagaatgctggtggagatgctggtggcagggct
gagttgaatcctctaccagagtacatcgatgagcgtctctccatttatagcaagctgaag
gcagaacatgatgccctgctgtcagataaagcagcaaaagacagcaagcccatcaagatc
acacttcctgatggaaaagtagtagatggggaatcctggaagaccacaccttaccaggtt
gcctgtgggatcagccaaggccttgctgataacactgtgatctccaaagtgaacaatgtg
gtatgggatctagacaggcccttagaggaagactgcagtctagtgtttctcaaattcgat
gatgaagaggcacaagcagtgtattggcactccagtgcccacataatgggagaggccatg
gagcgagtctatggaggatgcctttgttatggacctcccattgagaatggcttttactat
gatatgtttcttgaaaatgaaggtgtatcgagtaatgattttccctgtttggagaccttg
tgtaagaagatcatcaaagaaaagcagccctttgagaggctggaggtaaagaaggagact
ctgttggagatgttcaagtacaacaagttcaagtgcaggatcctaaatgaaaaggttacc
accccaacaactacagtttacaggtgtggacctttgattgatctgtgcagagggcctcat
gtgagacacacaggaaagatcaaggccttgaagatccacaagaactcttctacgtattgg
gagggcaaagctgacatggagagcctccaaaggatctatggcatcntctttcctgatcct
aaaatgctgaaagaatgggagaaatttcaggaagaagccaaaaacagggatcaccgcaaa
ctaggaagggagcaagacttgtttttcttccacgacctgagcccgggtagctgtttcttt
ctgcctaaaggagcctacatctataatacgctgatcgagtttattagaagtgaatataga
aagaggggattccaggaagtggtcacacccaacatctacaacagcaaactatggcaaacc
tcaggacactggcagcactacagcgaaaacatgttctcctttgaggtggaaaaggagatc
tttgctctcaagcccatgaactgccctggacactgtctgatgtttgatcaccggcctcgc
tcttggagagaactgcctttgcgtttggctgattttggggtcttgcaccgtaacgagttg
tctggagctcttacaggcctgaccagggtcagacgtttccaacaagatgacgcacacatc
ttctgctctatggaccagattgagtctgagataaagggttgcctgaacttcctacgtacc
gtgtatgacgtgtttggctttaccttcaaattgaacctttccaccaggccagagaagttc
ctaggagaacccgaagtgtgggaccaggccgagaagcaactggagaacagcctgaatgat
tttggagagaaatgggttctgaatcctggtgatggagctttttatggaccaaagattgat
attcagataaaggacgccatcggcaggtatcaccagtgtgccaccattcagctggacttc
cagttgcctattcgcnctaatcttacttttgtgagccatgatggcgatgacaagaagaga
cctgtgatcatccacagagcaatcctgggttcagtggagcgcatgatcgccatcctgact
gaaaactacgggggaaagtggccactgtggctgtccccacgacaggtgatggtggttcct
gtaggacccacttgtgatgagtacgcccagagagtacaaaaggagttccacaggggaggg
ttgatgacggatgtggatctggacccaggctgcaccctgaacaagaagatcaggaatgct
cagttggctcagtacaatttcattttagtggtgggtgagaaggagaagaccagtgacacg
gtaaatgttagaactcgtgacaacaaggtgcacggggagaggagtctgacagactgcatg
gagagactcaaggagctgaaggcctcaagatcccggaacgcagaagaggaattctga
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