Puntigrus tetrazona (Sumatra barb): 122349230
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Entry
122349230 CDS
T08985
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122349230 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptet04147
]
122349230 (copb1)
Membrane trafficking [BR:
ptet04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
122349230 (copb1)
Exosome [BR:
ptet04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
122349230 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT_2
HEAT
Cnd1
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
122349230
NCBI-ProteinID:
XP_043101136
LinkDB
All DBs
Position
7:16016748..16025006
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AA seq
953 aa
AA seq
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MTAAENVCYTLINVTNDSEPPSEVSLKTDLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLTTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDNLRPLIIEKMLEVFHAIKTVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVENELKKEAGEVKPEEEVTATPAPKLVTEMGTYVTQSALSTSRPSKKEEDRP
PLRGFLMDGDFYVAASLATTLTKVALRYVALAEDKKRQNSFVAEAMLIMATVLHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRRSLSHMLAVRLEEEKLSQKKESEK
RNVTVQADDPISFMQLTAKNEMTSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNITDLNEYLLHILKSTNMKCLTPEKALSGICGFMAANLYARSI
FGEDALANVSIEKPIHMGPDAPVNGHIRIRAKSQGMALSLGDKINLSQKRTAA
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgcagagaacgtgtgttacacgctcatcaatgtcaccaatgactccgaacca
ccatcagaagtcagcctgaaaactgatttagaaaagggggaaatcaaagccaagacagag
gctttaaagaaggtcatcatcatgatcctgaatggagagaaacttccaggcctgttaatg
actattattcggttcgtgctgcctcttcaggaccacacaattaagaaactattgctagtt
ttttgggagatcgttcctaaaacaactcccgatggcaaactacttcaggagatgatcttg
gtctgtgacgcctacaggaaggatctccagcatcccaacgagttcatccgtggctccacc
ctgcgcttcctgtgcaagctgaaggaatcagagctgcttgagcccctcatgccagcgatc
cgtgcctgtctggaacatcgtcacagctatgtacgccgcaatgcagtcctggccatctac
actatctacaggaactttgagcatttgatcccagacgcccccgagctgattcatgatttt
ctcgtaaatgagaaagacgcaagctgtaagagaaatgctttcatgatgctgattcatgca
gatcaggacagagctttggactaccttagcacctgtattgatcaggtgcatactttcgga
gacattctacagcttgtgattgtggaactgatttataaggtctgccatgccaacccctca
gagagagctcgtttcatccgttgtatctacaacctgctgcagtcgtccagtcctgctgta
aaatatgaagcggccggaactctggttactctgtccagcgctcccaccgccatcaaggct
gctgctcagtgctacattgatctgatcattaaagagagtgacaataacgttaagctcatt
gttctggaccgactgatcgagctgaaggaacatcctactcatgagcgtgtgctgcaggac
cttgtgatggatattctgagggttttgaccactcctgatcttgaggtccgcaagaagacc
ctacagctggccctggacctggtgtcatcccgcaatgtagaagagctggttatagtttta
aagaaagaagtaatcaagaccaacaatgtgacggagcacgaggacacagacaagtacagg
cagctgcttgttcgcactctccactcctgtagcgtgcgcttccctgacatggcagccaat
gtcatccctgtgctgatggagttcctgagtgacactaacgaggcggctgcagccgacgtg
ctggagtttgtgcgtgaggcgattcagaggtttgacaaccttagacctctcatcattgag
aagatgctagaggtctttcacgccatcaagactgtcaagatttacagaggcgctctgtgg
attttgggtgaatattgcagcactaaagaagacatccagagtgtcatgacagaagtccgc
aggtctttgggagagattcctattgtggaaaatgagttgaaaaaggaggctggagaggtg
aaacctgaggaggaagtgactgcaactccagctcctaagctggtgacagaaatgggtact
tacgtcactcagagtgccctgagcacctccagaccatccaaaaaagaagaggacaggcct
cctctgaggggcttcctgatggacggagacttttacgttgctgcctcactggccaccacc
ctcaccaaagtggctttgcgttacgttgcccttgccgaagacaaaaaaagacaaaattcg
tttgttgcagaggccatgctgatcatggccactgtgctccaccttggcaagtcatctcta
cccaagaagcccatcacagatgatgatgtggaccggatctcactgtgcctcaaagtcctg
tctgagtgctcgcccctcatgaatgacatctttaacaaggaatgccgcagatctctgtcc
catatgctcgctgtcagactggaggaggagaaactgtctcagaagaaagagtctgagaag
cgcaacgtaacagttcaggcagatgatccgatctccttcatgcagctgacagctaagaat
gagatgacgtccaaagaggatcaattccagctcagtctgctggctgctatgggcaatact
cagaggaaggaagccgcagaccctctagcttccaaacttaataaggtcacccagttaact
ggtttctccgatccagtgtacgcagaagcttatgttcatgtcaatcaatatgacatcgtc
ctggatgtcctggttgttaatcagactagtgacactctacagaactgcaccttggagctg
gcaacacttggggatcttaaattggttgagaaaccatctcctcttacattggctcctcac
gactttgccaacatcaaagccaacgtgaaagtggcctccacagaaaatggcatcatattt
ggaaacatagtatacgatgtatcgggagcagccagtgacaggaactgcgtggtcctcagc
gacattcacattgatatcatggactacattcaaccggcctcctgcacagacgccgagttc
agacagatgtgggctgagtttgagtgggaaaacaaggttaccgtcaacaccaacatcaca
gatctgaacgagtatctcctacacattcttaaatccaccaacatgaagtgcttgacccca
gagaaggccctgtccggcatctgtggctttatggcggcaaatctatatgcccgctctata
tttggggaggatgccctcgcaaacgtcagcatcgaaaagccaatccacatgggacctgat
gccccagtcaatggccatattcgcatccgagctaaaagccagggtatggctttgagtctg
ggtgacaaaatcaacctttctcagaagaggaccgctgcataa
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