Puntigrus tetrazona (Sumatra barb): 122349439
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Entry
122349439 CDS
T08985
Symbol
hmgb3a
Name
(RefSeq) high mobility group protein B3a
KO
K11296
high mobility group protein B3
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122349439 (hmgb3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptet04147
]
122349439 (hmgb3a)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
122349439 (hmgb3a)
Exosome [BR:
ptet04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
122349439 (hmgb3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
CENP-B_dimeris
NOA36
Motif
Other DBs
NCBI-GeneID:
122349439
NCBI-ProteinID:
XP_043101413
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All DBs
Position
7:14916676..14920879
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AA seq
213 aa
AA seq
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MAKGDPRKPKGKMSAYAYFVQTCREEHKKKSPEIPVSFSEFSKRCSARWKAMSDKEKSRF
EDMAKQDKVRYDQEMMHYMPGGKRGKKKDPNAPKRPPSGFFLFCSEHRPQIKAQYPSLGI
GDVAKKLGEMWNSLTDSNKQPYLMKANKLKDKYQKDVADYKTKGKAGGVSMSMGMMGNGM
APKPMMKSNMDDEDDDEEEEDEEEDDDEYDDDE
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggagaccccaggaagcccaagggcaagatgtctgcttatgcctactttgtt
cagacatgcagagaggagcacaagaagaagagccccgagattccagtcagcttttcggag
ttctccaaaagatgctctgcgagatggaaggccatgtctgataaggagaaatccaggttt
gaagacatggccaaacaggataaggtgcgttacgatcaagagatgatgcactacatgcct
ggaggcaagagaggcaaaaagaaggatcccaacgcacccaagagaccaccctctggattt
ttcctgttctgctcggaacatcgtccacaaatcaaagctcagtatcccagcttgggcatc
ggagacgtggccaaaaaacttggcgaaatgtggaacagcctcacagattccaacaaacaa
ccctatctgatgaaggccaacaagctgaaggacaagtaccaaaaggatgttgctgactac
aagacaaagggcaaggccgggggtgtgtccatgagcatgggaatgatggggaatggcatg
gctccgaaacccatgatgaagagcaatatggatgacgaggatgatgacgaggaggaggaa
gacgaagaagaggacgacgacgaatatgatgatgatgaatag
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