Puntigrus tetrazona (Sumatra barb): 122349483
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Entry
122349483 CDS
T08985
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122349483 (lingo1b)
Membrane trafficking [BR:
ptet04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
122349483 (lingo1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRRNT
LRR_9
V-set
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
122349483
NCBI-ProteinID:
XP_043101476
LinkDB
All DBs
Position
7:27184813..27197578
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AA seq
622 aa
AA seq
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MTFLQVTIKMVAREASGHSYLVACWQPILILMLGTVLSGSATGCPSRCECSAQERSVVCH
RRKLITLPEGIPTDTRLLDLSKNRLKAINPEEFLNYQHLEELQLNENIISVIEPGAFSNL
LGLRILGLRNNKLKLIQLGVFTGLSNLTRLDISENKIVILLDHMFQDLYNLKELEVGDND
LVFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLHNLLTLRLRHLNINIIRDFSFRRL
YRLKVLEIANWPLLETLTTKSLHGLNITTLSITNCNLTAVPYEAIQHLVYLRFFNLSFNP
IEVVEGNKMHNLLRLQAFHLVGGRLVSIEPYSFRGLNYLRVLNVSSNSLSTLEESAFHSV
GNLETLALHDNPLACDCRLLWVFRRRWRLNFNRQQPSCESPEFLQGKEFKDFPDVLPPNY
FTCQKSKIRDHKAIHRFVDEGTTVQFPCQADGDPAPMIMWQSPKKQFITTKSIGRLSVSP
DGTLEVRYAQIQDNGTYTCIAVNAGGNDTRLAHLHVHSYSPNWPHQPNKTFAFISNQPND
NGANGTGATDPFPFDMKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNAKPNIEIEYV
PRKVDGESSPTEGSHKISMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttctgcaggttaccatcaaaatggtggccagagaggcaagtgggcacagctac
ctggtggcgtgctggcagcccattctcatcctgatgctgggtaccgtgctgtccggctct
gccaccggctgcccctctcgctgtgagtgcagtgcccaagagcgatcggtcgtgtgccat
cggcggaagctgatcaccctccccgagggaattcccactgacacgcggctgttagatctc
agcaagaaccgcttgaaagccatcaacccggaggaattccttaactatcaacacctggag
gagctacagctcaacgagaacatcatttcggtcattgaaccaggggccttcagcaacctc
cttggcttgcgaatactggggctacgcaacaacaagctgaagctgattcagctgggagtt
ttcactggcctcagtaacctcacacgattagatattagtgagaataaaattgtcattttg
ctggaccacatgtttcaagatctctacaacctgaaagaactggaggtgggggacaacgac
ctagtgttcatctcccacagagcctttcatggcctcagcagcctagagcagctcactatg
gaaagatgcaatctgacctctgtgccaacagaggccttcagtcatcttcacaacctgctg
accctcaggctgcggcatctcaacatcaacatcattcgagacttttccttcaggaggctg
tatcggctcaaagtcttagagatagcaaactggcctcttttagaaaccttgaccacaaag
tccctccatggacttaacatcacaaccttgagtatcacaaactgcaatctcactgccgtc
ccttatgaggccattcagcacctggtgtaccttcgctttttcaacctgtcattcaatccg
atcgaggttgtggagggtaacaaaatgcacaatttgctgaggctccaggcatttcacttg
gttggaggccggctagtcagcattgagccttattccttcagaggactcaactaccttcgg
gttcttaatgtatccagcaatagtctaagcactttagaggagtctgccttccactcggtc
ggcaacctggagacactggctcttcacgacaaccccctggcatgcgactgtcgtctcctc
tgggtctttcgccgtcgatggcgacttaacttcaaccgccagcagccatcttgtgaatcg
ccagagtttttgcagggtaaagaattcaaagacttcccggatgttctcccaccgaattat
tttacctgtcagaaatccaagatccgggatcacaaagccattcatagattcgtggatgag
gggaccactgtccaatttccttgccaagcagatggagaccccgctcccatgattatgtgg
cagtctccaaaaaagcaattcatcactactaaaagcattggccgcctgtcggtgtcacca
gacggcaccctcgaggttagatatgcccagatacaagacaatggcacatacacctgtatt
gccgtcaatgcaggaggaaacgacacccgtttggctcacctacacgttcatagctactct
cccaattggccccatcagcccaataagacctttgctttcatctcgaaccagccaaatgat
aacggtgccaatggaactggtgcaacggatccctttccctttgatatgaagactctcatt
atcgctaccaccatggggtttatctctttcctaggggtggtgctgttctgtctggtgctc
ttgttcctctggagccgaggtaaaggcaatgccaagccaaacattgagattgagtatgtg
ccacggaaagtagatggagaaagcagcccaactgagggatcgcacaagatcagtatgaag
atgatttaa
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