Puntigrus tetrazona (Sumatra barb): 122349512
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Entry
122349512 CDS
T08985
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122349512 (chd9)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122349512 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
122349512
NCBI-ProteinID:
XP_043101511
LinkDB
All DBs
Position
7:21012655..21068311
Genome browser
AA seq
2943 aa
AA seq
DB search
MTDPIMDFFDDPSIFGGGLDSLVQDDPGFTPGSVSLDDELHLGPSLEPLQVDAGSRSSTI
QHGIPYNQPVGHFDTMKSQTSMEQSFPGSEGGGNNGRAFLPQQQSFQGHMNQVPQTNGLF
LHNSPMWGNHDQKGNNYNQHHQQIHHQQLQHKQFQQQQQFQQHQAQHQQYSHQHQHLQHR
QHSLNQHSISNQLQIPHQQIAHQGLHHIGKTYQEHFYYESNVPQNHSQHGHHNSLSVEGS
PFHSTVEASIMPVSSQQHSGFQIAQGVQGFTTGPRLEDNDLAFPVQSSPATHSFPSDSVS
HASSYPTAHYTLTGQPPPTANATQSYSSGPVSMTTSSTAMPSSASNLLDSGCPFLSNSGM
EHQQQQVQIPRSPAQRCPINTSKSNQNPYSSSKVFPDGLNSFAADCPFSTAERRNHDVVG
PLITSQSSSNGFQALEEVLLGEQHGHRLDLGDAPDLLGDELLPQLEALDQEENSSHSWVN
AGLENDQEEDVKNEEGMEDVLMVYNAQPPKNTNGPSSQPRVLSPPVKSSSSSSSSSSSFI
SVSEKRAQKRQQQQQQMESSLSDDKQQKANRIISEAIAKARERGEKNIPRVMSPESFPSS
SSQHRSHRAGSSKSRGKDKSSKKARIVTSSKSKQKAQIGKIVIKLGKKKRKKTDSSEELS
DDDRPTRRSSKDDDSKRRSNRKVKRKKYEDDGEARLSDEEMKVIVKAKKSNSNTHKQPAV
QLFVENPTEEDAAVVDKIMASRVVKKEVSPGVMVETEEYYVKYKNYSYLHCEWATEQQLE
KDKRIQQKIKRFKIKQAQRAHFFADMEEEPFNPDYVEVDRVLEVSYCEDKDTGEPVVYYL
VKWCSLPYEDSTWELKEDVDQTKIEEFKKLQAAKANANRMERPPAGHWKKREQSREYCNG
NCLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLDEIYRTGIKGPFLIIAPL
STIANWEREFRTWTYLNVIVYHGSVVSRQMLQQYEMYFRDAQGRVIRGAYRFQAVITTFE
MILGGCPELNAIDWRCVIIDEAHRLKNKNCKLLEGFKLMSLEHKVLLTGTPLQNTVEELF
SLLHFLEPTRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETI
IEVELTNIQKKYYRAILEKNFSFLAKGAGQANVPNLLNTMMELRKCCNHPYLIKGAEEKI
LEDFKEVYSPAAIDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDY
LIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFD
SDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGR
DNSLGGGGQMQQQLSKKEIEDLLRRGAYGAIMDEEDEGAKFCEEDIDQILQRRTKTITIE
SEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKAEIDMDTVNGRNSLVIDTPRVRKQ
TRPFSATKDELAELSEGESSGDDKPKLRRPHDRLNSYGRTECFRVEKNLLVYGWGRWKDI
LAHGRFKRQLSERDVEWICRALLAYCLVHYRGDDKIKSFMWDLIAPTEDGRTKELQNHLG
LSTPVPRGRKGKKMKTQSSSFDIQKAEWIRKHNPEHMLSDDGYKKHLKHHCNKVLLRVRM
LYYLKQEVIGVQCQKVLDGADVSEIEIWVPEPDHSEMPALWWDMNSDKCLLLGVFKHGYE
KYNTIRADPALCFLERVGRPDEKAIAAEQRGNDFMDGDVDDPEYKPAPALLKDDMEDDAS
SPGDLVITDTVGEGGSVLDGGGGGTLGAGSGMYWPSPSTLTARLRRLITASQRFTKSRQI
LQIHQTQQALTPALYPLPPTISDTLNPKIAAKIERQQRWTRREEADFYRVVSTFGVVFDP
DLGRFDWTKFRAMARLNKKTDESLHKYLCAFIAMCRRVCRLPAIEGDMMDSSLAIQPITE
ERASRTLYRVELLRKIREQVLRHPQLYERLSLCQPGPDLPVWWETGSHDRDLLLGAAKHG
VSRTDYHILRDPELCFIAAQRNYSQNKGTAAQVQAQNQTPSLGQCHIPTPLQHIQAKEAS
ASPLSNQTELKEEPLSDREEESGEQNSKMETPSIRPPTPSGVDEKDDMHKVGENESRMVA
ARTKPLTPNSVTRKQKKLSKRSRREARRGSGSDSDSDGSSSSSSSSSSSRSSSSSSSSSR
SGSSSSSSSSSCSSGSSSSSSSSSSSSEDSDSEEVPKNASAVPGVKGFDEDSVASLNTTQ
DDMQDSHVTNGISNPPHPFQGGYMLAASYWPKDRVMINRLDSICQAVLKGKWPGVRRAYE
GNAVASFYTTKLLDNTTTLTEDPSASPQGSKVKKHVADREKEFSVKINDQEGSLKLTFQK
QGLPLKRPLEGEEGPLAQQQYLARLQELQNASDTSLADYTKTQNSYPQVLPEQMRLNGVM
DGQPVMKKRRGRRKNVEGMDLLFMNRNRPPMMAEQNPAGWSSSVPSTSAAPGLSTPQGPN
TLDTESRVPVISLKDGTRLAGEDAPKRKDLDHWLKEHPGFVADVGAFIPSANKMQFQDGR
PKQKRHRCRNPNKIDINSLTGEERVQIINRRNARKIGGAFAPPLKDLSRFLQENPEYGVP
PEWADVVKQSGYLPESMFDRILTGPIVPEEVSRRGRRPKNALAKAATVASASANAALGLS
PLLTNGLLTGLDLPSLQALQHNLQSLQSLQLTTGLMGLSHDPTNMATMFPMMLSGMTGLP
NLLGMSGILGKQDAAGVALTSDEDGKKKSGAEFATPKGSAETLSPDGKADRTESQSSKAT
TSTAANSNQTSASASGHSLALNPLLLSSMLYPGMLLTPGLNLPVANQPQAANTQPTPPLQ
PAASEATAQLAGRSEDKDSDEGEEPDEKKDNSGPEGSAKAESSSSESDSSSSSSEDSDSS
DED
NT seq
8832 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccccatcatggacttctttgatgatcctagcatatttgggggagggcttgac
agcctagtccaggatgatccagggtttacccctggttcagtgtccttggatgatgaactt
cacctgggtcctagtttggagcctcttcaggtggatgcagggtcaagatcttctactatc
cagcacgggataccctacaaccaacctgtggggcattttgacactatgaagtcacagacc
tcaatggaacagtcctttcctggttcagaaggaggtggcaacaatggaagagcatttttg
ccacagcagcaatcatttcaagggcatatgaaccaagtgccccagactaatggactgttt
cttcacaacagccccatgtggggaaaccatgatcaaaaagggaataactacaatcaacac
catcaacaaattcatcatcaacaacttcaacataaacaatttcagcaacaacaacagttt
cagcagcatcaagctcaacatcagcagtacagtcaccaacaccaacatcttcagcataga
cagcacagcctcaatcaacactcaatttcaaaccagttgcagatccctcaccaacaaata
gcccatcaaggcttgcatcatattggcaagacctatcaagaacatttttactatgagagc
aacgtcccacaaaatcattcccagcatggccaccataactcgcttagcgtggagggtagc
ccctttcattctacggttgaggcctcaataatgcctgtgtcttctcaacagcacagtggc
tttcaaatagcccaaggggtccaaggttttactacaggtccaaggttggaagacaatgac
ctggccttcccagttcagtcttcccctgcaacccattctttcccaagtgattcggttagc
cacgcttcatcttatcccactgctcattatactctgactggtcagcctccccctacagca
aatgcaacccagtcttactcctctggcccagtctctatgacaacctcttctacggctatg
ccttcatcagcttcaaaccttttggattctggttgtcctttcctgtctaattctggaatg
gaacatcagcagcaacaagtccaaataccaagaagtccggcacaacggtgcccaataaat
acctccaaatcaaatcagaatccctacagctcttcaaaggtattcccagatggtctgaat
tcgttcgctgcagactgtccattctctacggcagagcgaaggaaccatgatgtggttgga
cctttgattacaagccagagcagcagcaatgggtttcaagcactggaagaggtcttgctt
ggagagcagcacggtcacagacttgacctgggtgatgctcctgaccttttaggggatgag
ctgttgcctcagttggaggcactagaccaggaagagaactccagtcactcttgggtaaat
gcaggactagaaaatgaccaggaagaggatgtgaagaatgaggaaggcatggaggacgtg
ctaatggtttacaatgcacagcctcctaagaacactaatggtcccagcagccagccgcgg
gtactcagcccaccagtgaagagcagctcctcttcttcctcttcgtcatcctcgttcata
tccgtgtcagaaaagcgggcacagaagcgacagcagcagcaacagcagatggagtcgtcc
ctttcggacgataaacaacagaaggccaatcgaatcatctcagaggccatcgccaaagca
cgagagaggggagagaaaaatattccacgtgttatgagtccagaaagcttcccgtcgtct
tcgtcgcagcaccgcagtcacagggccggttcttccaagtccaggggcaaggataagagt
tccaagaaggcccggattgtgacgtcatccaagtccaaacaaaaggctcagattggtaaa
atcgttataaagcttggaaagaagaagcgaaagaagacagattcctctgaagagctgtct
gatgatgacagaccaactcgacgatcctctaaagatgatgattcgaagagacgttcgaac
cggaaggtcaagaggaagaagtatgaggatgacggcgaggctcgtttgtccgatgaagaa
atgaaggtcattgtaaaagccaagaagagcaactccaacactcacaaacagcctgcagtg
caactgtttgtggagaatcccactgaggaagatgctgctgtggttgataaaatcatggca
tctcgtgtggtgaaaaaagaggtttctcctggggtgatggtagaaaccgaagagtactat
gtcaagtacaaaaactactcgtatcttcactgtgagtgggcgacggagcagcagttagag
aaagacaagaggatccagcagaaaatcaagcgctttaagatcaaacaggcgcagagagca
cacttctttgctgatatggaggaggaaccattcaatcccgactatgtagaagtggacaga
gttctcgaggtctcatactgtgaggacaaggataccggagagcccgtggtgtattacctg
gtgaaatggtgttcattgccgtatgaggacagcacatgggagctgaaggaagatgttgac
cagactaaaattgaagagttcaaaaagctgcaggcagcaaaagcaaacgccaacagaatg
gagcgtccaccggcaggtcactggaagaagcgggagcaatcacgagagtattgtaatgga
aactgtctcagggattaccagctggagggggtcaactggcttctcttcaactggtataac
aggcgtaactgtattctggcggatgagatgggtctaggaaagaccatccagtccatcacg
tttctggatgagatctatcgcacagggatcaaggggcctttcctcatcatcgcccctctc
tctaccatcgctaactgggagagagagttcagaacttggacgtacctcaacgtcattgtg
taccatggcagtgtggtcagcagacagatgctacagcagtatgagatgtactttagagat
gctcagggtcgtgtgataagaggtgcttaccggtttcaggcggtcatcacaacatttgag
atgatattgggtggctgtccagaacttaacgcaatagactggcgctgtgtcatcattgat
gaagcccatcggctcaaaaataagaactgcaagctactggagggcttcaaacttatgagt
ctggaacataaggttttattgacgggcactccgctgcaaaatactgtggaggagctcttc
agtctgctgcacttcctggagccgacccgcttcccttctgaaagtaccttcatgcaggaa
tttggagacctcaagactgaggagcaggtccagaaactccaggccatcctgaaaccgatg
atgctgcgtcgtcttaaggaagacgtggagaagaagttggctcctaaagaggagaccatc
attgaagtggagctcaccaacatccagaagaaatactaccgcgccatcctggagaagaac
ttctcattcctggctaagggagctggccaagccaacgtcccgaatctgctcaacaccatg
atggaactgcggaaatgctgcaaccatccctacctcatcaaaggggctgaggagaagatc
ctagaggacttcaaagaggtgtacagccccgcagcgatagatttccacctgcaggctatg
attcagtcagcaggtaaactcgttctcattgacaagctgctccccaagatgaaggccggt
ggacacaaagtgctcatcttttctcagatggtgcgctgcctggacatcctggaagactac
ctcatccagagaagatacctctatgagcggatagacggccgtgtacgtgggaacctccgt
caagcagcaatagaccgtttcagtaaaccagactccgatcgattcgtcttcctgctgtgt
actcgagcaggtggcctcggtattaacctcacagctgccgacacctgtatcatctttgac
tctgactggaatcctcagaatgacctgcaggctcaggctcgctgccacaggattggtcag
aataaagcagtaaaagtatatcgactaatcacacgtaactcttatgagagagagatgttc
gatagagccagtttgaagctgggattggataaagctgtgcttcagagcatgagcggacga
gacaacagtctaggaggaggagggcagatgcagcagcagctctctaagaaggagattgaa
gatcttctgcggcgtggagcttatggtgccatcatggatgaggaagatgagggcgctaaa
ttttgtgaagaggacattgaccaaatcttgcaacgcagaacgaagaccatcactattgaa
tctgagggtcgaggctccacgtttgccaaggccagttttgtagcttcagggaacagaaca
gacatctctctggatgaccccaacttctgggacaagtgggccaagaaagcagagattgac
atggatacagtcaatggcagaaacagtctggtgatcgacacccctcgtgtgaggaaacag
acccggccgttcagcgctactaaggacgagctagccgagctctctgaaggggagagtagc
ggagatgacaaacccaaactccgccggccacacgaccgcctcaacagctatggccgcact
gagtgcttccgggtggagaaaaatttgttggtgtacgggtggggtcgctggaaggatatc
ctggctcacggacgctttaaacgtcagctgagcgagcgcgacgtggagtggatatgcaga
gcactcctggcatactgtcttgttcattaccgtggagatgataaaatcaagagtttcatg
tgggatctgatcgctcccacagaggacggcaggaccaaggaactccagaaccatttgggt
ttgtcgactccagtgccacgaggcaggaaaggaaagaagatgaagactcagtctagctca
tttgatatccagaaggcagagtggatccgaaaacacaacccagaacacatgttgtctgat
gacgggtacaagaaacatctgaaacaccactgcaacaaggtgctgctgagggttagaatg
ctgtactatctgaaacaagaggtgattggagtacagtgccaaaaagtgctggatggggca
gatgtcagtgagatagagatctgggttcctgagccggatcattcagagatgcctgcactg
tggtgggacatgaactcggacaaatgtctgctgttaggggtctttaagcacggttatgag
aagtacaacactattcgtgcagatccagccctgtgtttcttagaaagggttgggcgcccg
gacgagaaggccatcgctgctgaacagagaggaaatgactttatggatggagatgtggac
gaccctgagtataagcctgctccagctttgctgaaggatgatatggaggatgatgcttcc
tccccaggagacttggtcatcactgatacggtcggagaaggagggtctgtattagatggt
ggtggtggtgggactttgggtgctggatcagggatgtactggccctcaccctccacgttg
acggcccgactgcggcgtctgatcactgcttctcagcgcttcaccaagagcagacagatc
cttcagatccaccaaacacagcaggccttgacccctgccctctaccctctgccccccaca
atcagcgacacactcaatcccaaaattgctgctaagattgaaagacaacaacggtggaca
cgaagagaggaggcagatttctatcgtgtggtttcaacatttggggtagtgtttgatccg
gatctgggccgctttgactggaccaagttcagagctatggctcgactgaacaaaaaaact
gacgagagtctacacaagtacctgtgtgcctttattgccatgtgcaggagggtctgccgc
ctgcccgctatagagggagatatgatggactcctctcttgctatacaaccaatcacagag
gagcgtgcctcccgtaccttatacagagtggagctgctgcggaagataagagaacaggtg
ttgcgtcacccgcagctttatgaacgtctctcactgtgccagccaggaccggatcttcca
gtatggtgggaaacaggatcccacgatcgggatcttctacttggagcggccaaacacgga
gtcagccgaacagactaccatatcctccgtgacccggagctttgcttcatagcggcacag
agaaactacagccagaacaagggaactgcagcacaagtccaagcccagaatcagacacct
tcgctgggacagtgtcacatcccaaccccccttcagcacattcaagctaaagaggcttct
gcttcacctctctcaaaccaaactgaactgaaggaagagccactgtcagacagagaggaa
gagagcggagagcagaattccaagatggagacgccctccatcagaccacccacaccttcg
ggagtggatgagaaagatgacatgcacaaagtgggagagaacgagagccggatggtggca
gccagaacaaaaccactcacaccgaactctgtaactcgaaaacagaagaagctgagtaag
cggagccgcagagaagccaggagagggtcaggatctgactcggactcggatggctcgtca
tccagctcttcgtcaagttcttcatcgagatcttcttcctcatcctcgtcttcgtctcgg
tctggatccagttcatcgtcttcgtcttcctcctgttcttcaggctcttcatcttcgtca
tcttcgtcatcctcttcttcagaagacagtgacagcgaggaggtaccaaagaacgcgtca
gcagtgcctggtgttaaaggctttgacgaagacagcgttgcctctctcaacactacacaa
gatgacatgcaggacagtcatgtgaccaacggcatctctaaccctccccaccctttccag
ggaggttatatgctcgctgcctcctactggccaaaggaccgtgtcatgataaaccggttg
gacagtatatgtcaggcagtgctgaaggggaaatggccaggggttcgtcgggcatacgaa
ggcaacgcagtggcttctttctacaccaccaaactcctggacaacacgaccacgctcaca
gaagacccttcagcctcccctcagggttcaaaggtgaagaagcatgttgcagacagagaa
aaggagttctcagtcaaaatcaatgaccaggaaggcagccttaaactgaccttccagaag
caaggtttgcctctgaagcgccccctggagggtgaggagggacctctcgctcagcagcag
tacttagctcggctacaagagttacagaatgcatccgataccagcctcgcagactacacc
aaaacacagaacagctatccacaagtactgccagaacaaatgcgactgaatggggttatg
gacggacagcccgtaatgaaaaagaggagaggacggcggaagaatgtggaggggatggac
ctgctgttcatgaacagaaacaggcctcctatgatggcagagcagaatcctgctggctgg
agtagcagtgtccccagtacatccgctgcccctggcttgagcacacctcaggggcccaac
acccttgataccgaaagccgcgttcctgtcatcagcctcaaagatgggactcgactagcc
ggagaggacgctccaaaacgaaaagaccttgaccattggctaaaagagcacccaggcttc
gtggcagatgtgggagcctttattcctagcgcaaacaagatgcagtttcaagatgggaga
ccaaaacaaaagagacaccgctgcaggaaccccaacaaaattgacatcaacagcctgact
ggagaagagcgagtacagatcatcaacaggagaaatgctcgcaagattggtggtgcattt
gctcctcctctgaaagatttaagccggttcctgcaggagaatccagagtacggtgtacca
ccagagtgggcggacgttgttaaacagtctggttaccttcctgaaagtatgtttgaccgc
atcctgaccggccccatcgttcctgaagaagtgagccgacgaggacgacgtcccaaaaac
gctctggctaaagcagccaccgtggccagtgccagtgccaacgccgccctggggctcagc
ccactcctaaccaacggcctcctcaccgggctggacctgcctagtcttcaagctcttcag
cataacctccagagcctccagtctctccaactcaccaccggcctcatgggactgtctcac
gaccccaccaacatggccaccatgtttccgatgatgctgtccggaatgaccgggctgccg
aacctcctcggaatgagcggcatcctcggaaaacaggacgcggcgggtgtggctttgaca
agcgacgaggacgggaaaaagaagagcggtgcggagttcgccacacccaaagggtcggct
gagactttgagtccggatggcaaagctgataggacagagagtcaaagctccaaagccacc
acctcgacggccgccaactcgaatcaaacaagtgcttctgcttcaggccactcactggcc
ctcaacccccttctcctctctagtatgctctacccagggatgcttcttacgccaggcctt
aacctgcctgtggccaatcagccgcaagctgcaaacactcagccaaccccaccgctgcaa
cctgctgcctccgaagccacggcgcagctggccggccgctcggaggacaaagacagcgat
gagggggaggagcccgacgaaaagaaggataacagtggtccagagggctctgcgaaggcg
gagtcttcctcctccgagtccgacagctcctcctcgtcatccgaggattccgattccagc
gacgaagactga
DBGET
integrated database retrieval system
