Puntigrus tetrazona (Sumatra barb): 122349522
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Entry
122349522 CDS
T08985
Symbol
sorcs2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122349522 (sorcs2)
Membrane trafficking [BR:
ptet04131
]
Protein recycling
Others
Others
122349522 (sorcs2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD_4
PKD
InlK_D3
BNR_6
DUF6786
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
122349522
NCBI-ProteinID:
XP_043101529
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Position
7:22614163..22746832
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AA seq
1156 aa
AA seq
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MKALIMAVLAHLYPAVFLACAWMSLFGPISCHTGVINQRNARDRELDSRGGHVTGRDEAL
IAAHSRGGYSGDPGGPRVRRASAPEKVSLLSSSFVLKGDATHNQAMVHWTGENSSVILIL
TKYYHADTNKVLESSLWRSSDYGSTYTKLNLMPGTTIIVTNFYICPTNKKKVILVSSSIN
ERDQMLFISTDEGSSFQRQPVSFSVDTLLFHPSEEDKLLAYSKEAKLYISTDLGHKWTLL
QERVTKDRVFWAVTGVDVDLDLVHMEIQDIGGGYLYVTCLIQNCSDKMVTAQFLGKIDHN
SLSVQDEYIFVKVTTGNRTKYYVSYRRNEFVQMRFPKYALPKDVQIVSTDENQVFLALQE
WYQTDTYNLYQSDPQGVYYSIVLENVRSTKQPEENVLIDILEVRGIKGVFLANQKLDGKV
ITLITYNKGRDWVPLAPPTTDMNGKPVSCKQPDCHLHLHLRWADNPYVSGTVHTKDSAPG
LIMGAGNLGSQLVEYKEEMYITSDCGKTWRQVFEEEHHILYLDHGGVIVAIKDTSIPLKI
LKFSIDEGRTWSIHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVDFRQSF
PRQCTEADYDSWKLTDLQGEKCIMGQERMYRRRKESSFCIKGKSYTSALTTKPCQCTEKD
FACDYGFERAPSLRLEGDRCYPDFWHDPDSPPENCHLGHSYKSSTGYRKVISNVCEGGLN
KEQSSKQHSCPLLPPRGLQLGIKGQMLAVAPGDDITFIVHQEQGDTTSTRYQVDLMDGVR
AIYENLTVTDEPIQHRYEKPGVYRVNVKAENSAGHDQATLYIQVTAPLQDVHLEVVPIAG
RNQEVNLTAIVLPTEANLTVFYWWIGDNLQPKLTLENSLITRFSEEGEVPVTVQASNGRS
MVQDSKTVIVYDHFQVIPLSFSHNLDRFNPNIPEWRQDVGQVVTKILAKLTGVPQDSLVT
TVKPGLPTTADLYVLPQESTPVKRSVFVDKRVPTIKQVLSENNVSFIVRGGLRVLVTLAD
SDRGSRLAAAGPGVWALAVFLLISLISAAAFILFKFKRKNYKNHGSLLRPEESSLTRPWL
RFRKLPGRNVYAQMHNEKEQEMTSPVNHSEDTQNIIQGEEFIDDDLDSQTLGNAGGNHSG
VVLSINSRELHSYLTS
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgctcatcatggcagttttggcgcacctgtacccagccgtgtttttggcttgc
gcgtggatgtcactgttcggaccgatttcatgtcacaccggcgttataaaccagagaaac
gcacgggaccgagagcttgacagccgcggtgggcatgtcactggcagggacgaagcgctt
atcgcggcgcacagccgcggaggttacagcggggaccccggcggaccccgagtccggagg
gcatcggctccggaaaaagtctctctactcagcagctctttcgttcttaaaggggatgcc
acccacaaccaggcaatggtccattggacgggggaaaatagcagcgtcatcctcattctc
actaaatattaccatgcagacacaaacaaagttcttgagagttctctttggagatccagt
gattatgggtcaacctacaccaagctcaacctgatgcctggaacaaccattatcgtcaca
aacttctacatctgtcctaccaataagaaaaaggtgatcttggtgagctccagcatcaat
gaacgtgaccagatgctcttcatcagcacagatgagggttcatccttccaacggcagcct
gtctccttctccgtggatacactcctctttcatccatctgaggaagacaaacttttggct
tacagcaaggaggcgaagctgtacatctccaccgatctgggtcacaaatggactctgcta
caggagcgtgttacaaaagacagagttttttgggccgtgacgggggtggatgtggatctt
gatttggttcacatggagattcaagacatcggtggtggatacctttatgtgacatgtctc
atacaaaattgctctgataaaatggtgacagcacagttcttggggaagattgaccacaat
tccctctcagtgcaagatgaatacatatttgtgaaggtaactacaggaaatcggaccaag
tattacgtctcatatcggagaaatgaatttgttcagatgagattccctaaatatgccctt
ccaaaggatgtgcaaatagtgagtacagatgagaatcaggtattcctggccctgcaggaa
tggtatcaaacagacacgtacaacctctaccagtcagatccacaaggtgtctattactcg
attgtgttggagaacgtccgcagcaccaagcagcctgaagagaatgtcctcatcgacatc
ttggaggttcgtggcatcaagggcgtattcttagccaatcaaaaacttgatggaaaagtg
atcactcttatcacctacaacaaaggcagagactgggtaccactggctcctcccacaact
gatatgaatggcaaacctgtcagctgcaagcagcctgactgtcacctccatctccacctg
cgatgggctgacaacccttatgtgtctggaacggtccacactaaagattcggccccagga
ctcataatgggtgcaggtaaccttgggtctcagctggttgaatataaagaggagatgtac
atcacttcagactgtggcaagacctggagacaggttttcgaagaagaacaccacattctt
tatctggatcatggcggtgtcattgtggccattaaggacacctctatccctttaaaaata
ctcaagttcagcattgatgaaggtcgaacatggagcatccacaacttcaccagcacttct
gtttttgtggatggactgttgagcgaacctggagatgagacactggttatgacagtgttt
ggccacataagttaccgttcggattgggagctggtgaaggtggatttccgacagtcgttt
cccaggcagtgcacagaagctgattatgactcctggaaactcactgacctacagggagag
aaatgcatcatgggccaggagcgaatgtacaggaggaggaaagagtcctcgttctgcatt
aaagggaagagctatacatcagctttaacaaccaaaccctgccagtgcactgagaaagac
tttgcctgtgactacggctttgagcgtgctcccagcctccggttagagggcgatcgctgt
tatcctgacttctggcatgatcccgactctccacctgaaaactgccacttaggacacagt
tacaagtccagcacaggttaccggaaggtcatctctaatgtttgtgagggtggcttgaat
aaagaacagagctcgaagcagcattcctgccctctgctgccccctagaggtctgcagctg
ggcatcaagggacagatgctggccgtggcacctggtgatgacatcactttcattgtccat
caggaacagggtgacaccaccagcaccagatatcaggtggatctgatggacggcgtcagg
gctatatatgaaaacctgactgtcacagatgaacccattcaacaccgttacgagaagcca
ggtgtttaccgtgtcaatgtgaaggctgaaaactccgctggacatgaccaagccacactt
tacatccaggttacagctcctcttcaagatgtccatctggaggtggtcccaatcgctggc
agaaatcaagaagtaaatctcacagctatagtgctgcccactgaagcaaaccttactgtg
ttttactggtggattggagataaccttcagccgaagctgaccctggagaacagtctgatt
acaaggttctccgaggagggggaagttcccgtgacggttcaggcttctaatggccgatcc
atggtacaggacagcaagactgtcattgtctatgatcatttccaggtcatccctttgagt
ttcagtcataatttggatcgctttaacccaaacatccctgaatggagacaagatgtggga
caagttgtaaccaagattcttgcaaagctcacaggggttcctcaggactctttggttacc
acggtgaagcctggtcttcccaccactgcagacctctatgttctacctcaagagagcaca
ccggtgaagaggagtgtgtttgtggataagcgtgttcccactataaagcaggttctgagt
gagaacaacgtgagctttattgtgagaggagggttaagagtattggtgactctggcagac
tcggatagaggttctcggctggctgcagcaggtccaggtgtttgggctctagctgtcttt
cttctcatcagtctgatctcagctgcagcattcatactcttcaagtttaaaaggaaaaac
tacaaaaaccatggttccttgctgaggccagaggagagcagcctaacgcgtccctggctg
cgtttcagaaaactgccgggtcgaaacgtctacgcccagatgcacaatgagaaggagcag
gaaatgaccagccctgtcaatcacagtgaggacacgcagaatatcattcaaggcgaggag
ttcattgatgacgaccttgactcgcagacactaggtaacgctggaggcaaccactcagga
gtggtgttgagcataaattcaagggagctgcacagttacctgaccagctga
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