Puntigrus tetrazona (Sumatra barb): 122349573
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Entry
122349573 CDS
T08985
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122349573 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptet03021
]
122349573 (smarcd3b)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122349573 (smarcd3b)
Transcription machinery [BR:
ptet03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122349573 (smarcd3b)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122349573 (smarcd3b)
PBAF complex
122349573 (smarcd3b)
GBAF(ncBAF) complex
122349573 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
122349573
NCBI-ProteinID:
XP_043101608
LinkDB
All DBs
Position
7:complement(23916390..23946572)
Genome browser
AA seq
506 aa
AA seq
DB search
MASEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPFGGSPAVRPGL
TNQAMEASRKRPAPSQQQIQQQAVQNRNRKKPVGFPGPNEMPGRQMDMREAQSDPTLGSN
AKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKL
RLYISNTFNPAKPDAEDSEGSIASWELRVEGKLLDDPGKMKRKFSSFFKSLVIELDKDLY
GPDNHLVEWHRTQTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHT
QTRSSIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPD
PIVINHIISVDANDQKKTACYDIDVEVEDPLKAQMSSFLLSTANQQEIASLDNKIHETIE
SINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERRAEFYHEPWSQE
AVSRYFYCKIQQRRQELEQALALRNT
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggaggagaccgctggaggagctcgcaaagccaccaagagcaaactatttgag
ttcctcgtccatggagtgcggcccggtatgccatcaggagcacgaatgcctcaccagggg
gccccaatggggcctccagggccaccatttggaggaagccctgctgtccggcccggactc
accaatcaggccatggaagccagtcgtaaacgtcccgctccttcacagcagcagattcag
cagcaggccgtacagaatcgaaacaggaagaagcctgttggatttcctggaccaaatgag
atgccagggagacagatggacatgagagaggcccaatcagatcccacactcggatcaaat
gccaagaggaggaagatggctgataagatccttccacaaaggattcgtgagcttgttccg
gagtcacaggcgtatatggatctgttggcattcgagcgcaaattagaccagaccataatg
cgcaaacgggtggacattcaagaagcacttaagagacccatgaagcaaaagcgaaaactg
cgtctctacatctccaacacatttaaccctgccaagcccgatgcagaggactctgaagga
agcattgcatcctgggagctacgtgtggagggcaaactgctggatgatccgggaaagatg
aagaggaagttctcctcattcttcaagagtctggtgattgagcttgacaaagacctttat
ggccctgataaccacttggtcgagtggcatcgtacccaaaccactcaggagactgatggt
ttccaggtgaagaggcctggagatgtgaacgtgcgctgcacactgctgttaatgctagat
taccagccgcctcagtttaaactggacccgcgtctggctcgtctgctgggaatacacaca
cagactcgctccagtatcatccaggccctctggcagtatgtcaaaactaacaaactgcag
gactcgcatgacaaggagtacataaattgtgacaagtacttccaacagatcttcgactgt
ccgcgtctgaagttctctgaaattccacagcgcctcaccaacctcttacttccccccgac
cctattgtcatcaatcacatcattagcgtcgacgctaatgatcagaaaaagacagcgtgc
tatgacattgatgtagaggtggaagatccccttaaagcacaaatgagcagcttcttgctc
tccacagccaatcagcaagagattgcctctctggacaacaagatccacgagactattgag
tccatcaatcagctgaagatccagagagatttcatgctcagcttctccagggatcccaaa
ggctatatccaggactggctcaaatcccagagcagagatctgaagctgatgacagatgtt
gttgggaacccagaggaagagaggagagcagagttttatcatgagccttggtctcaggag
gctgtcagccgttacttctactgcaagattcagcagaggaggcaggagctggagcaggcc
ttggccttgaggaacacctag
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