Puntigrus tetrazona (Sumatra barb): 122349799
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Entry
122349799 CDS
T08985
Symbol
mex3b
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122349799 (mex3b)
04121 Ubiquitin system [BR:
ptet04121
]
122349799 (mex3b)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122349799 (mex3b)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122349799 (mex3b)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122349799 (mex3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
zf-C3HC4
KH_2
RING_XB3-XBAT31
zf-C3HC4_2
KH_DEAH11_2nd
Prok-RING_4
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
122349799
NCBI-ProteinID:
XP_043101903
LinkDB
All DBs
Position
7:complement(9936180..9940087)
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AA seq
523 aa
AA seq
DB search
MPSSLFADMERSGSGGPGDALDDQRALQIALDQLSLLGLDNDENSLYDNEPRKKSVNMTE
CVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRREDVAMARREII
SAAEHFSMIRASRNKNSSLNGNATAPGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRI
QQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIAMRTGGLIEFTDENDFHANGT
DVGFDLHGNASLWSKPSSSVTPTSGRKPFSNYRNDSSSSLGSASTDSYFGGNNSSSRLAD
YSPPSPALSYTASSNGNNNNNNNNNNANGFVYGGEVISPDCADLAFDPSPGFDPTPAPPG
LMWSQYERAANGTSSSSPVFPANASANANNNGPQRRANQPRLSPPLHQSNGATEHPLARR
VRSDPGGGPLSFPGYPMGSHHPGVPSDSSISSSSSSSSSSSSGTSRKGSRDCSVCFESEV
IAALVPCGHNLFCMECANRICERNEPKCPVCHAAVTQAIRIFS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcctagttcgctgttcgccgacatggagcggagcggcagcggcggaccgggggacgcc
ctggatgaccaaagagccctgcagatcgccctggaccagctctcgctgctcgggctggat
aacgatgaaaattcgctgtatgacaacgagcccaggaaaaagagcgtgaacatgaccgaa
tgcgtgcccgtgcccagctccgaacacgttgccgaaatcgtcggcaggcaaggttgcaag
attaaagccctgcgagcaaagaccaatacgtatatcaaaactccggtgcggggagaggag
ccggtctttgttgtgacaggcaggcgagaggatgtagccatggctcggagggaaatcatc
tcggcggccgagcacttctccatgatccgagcctcgcggaacaaaaacagcagcctgaac
ggaaacgccacggcgcccggcccgcccaacctgcccggccagaccaccattcaggtgcgg
gtgccctatcgcgtggtggggctggtggtcggccccaagggggccaccatcaagcgcatc
cagcagcagacgcacacctacatcgtcacgcccagccgcgacaaagagccggtgttcgag
gtgaccggcatgccggagaacgtggaccgggccagggaggagatcgaagcgcacatcgcc
atgcgcaccggcggcctgatcgagttcaccgacgagaacgacttccacgccaacggcacg
gacgtgggcttcgacctgcacgggaacgcgagcctgtggagcaagcccagctccagcgtc
actcccacttccggccgcaagccgttctccaattaccgcaacgacagctccagctccctg
gggagcgcctccaccgattcgtatttcggcggcaacaatagcagctcgaggctggccgac
tacagcccgccaagccccgccctcagctacactgcctccagcaacggcaacaacaacaat
aacaacaacaacaacaacgccaatggatttgtctacggcggcgaggtgatctcgcccgat
tgcgccgacttggccttcgacccgtcgccgggattcgaccccaccccggcgccgccgggc
ctgatgtggtcgcagtacgagcgcgccgccaacgggacctcgtcctcgtcgcccgttttc
cccgccaatgcttccgccaacgccaacaacaacggcccgcagcgccgagccaaccagccc
aggctgtccccgccgctgcaccagtccaatggcgcgaccgagcatccgttggcgcgccgg
gtgcgcagcgatccgggcggaggcccgctcagcttccccggttacccgatgggatcgcat
caccccggcgtcccctccgactcgtccatctcctcgtcctcgtcctcctcctcttcgtcc
tcgtccgggacgagccgcaagggaagccgggactgctcggtgtgcttcgagagcgaggtg
atcgcggccctggtgccctgcggccacaacctgttctgcatggagtgcgccaaccgcatc
tgcgagaggaacgagcccaaatgccccgtctgccatgctgcagttactcaggctatacgt
attttttcctaa
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