Puntigrus tetrazona (Sumatra barb): 122349804
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Entry
122349804 CDS
T08985
Symbol
itga6b
Name
(RefSeq) integrin alpha-6b
KO
K06485
integrin alpha 6
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04382
Cornified envelope formation
ptet04510
Focal adhesion
ptet04512
ECM-receptor interaction
ptet04514
Cell adhesion molecule (CAM) interaction
ptet04518
Integrin signaling
ptet04810
Regulation of actin cytoskeleton
ptet04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122349804 (itga6b)
04514 Cell adhesion molecule (CAM) interaction
122349804 (itga6b)
04518 Integrin signaling
122349804 (itga6b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122349804 (itga6b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122349804 (itga6b)
04810 Regulation of actin cytoskeleton
122349804 (itga6b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122349804 (itga6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptet04147
]
122349804 (itga6b)
04515 Cell adhesion molecules [BR:
ptet04515
]
122349804 (itga6b)
04090 CD molecules [BR:
ptet04090
]
122349804 (itga6b)
Exosome [BR:
ptet04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122349804 (itga6b)
Exosomal proteins of breast milk
122349804 (itga6b)
Cell adhesion molecules [BR:
ptet04515
]
Integrins
Integrin alpha subunits
122349804 (itga6b)
CD molecules [BR:
ptet04090
]
Proteins
122349804 (itga6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
FG-GAP_2
Integrin_alpha
NdhN
Motif
Other DBs
NCBI-GeneID:
122349804
NCBI-ProteinID:
XP_043101910
LinkDB
All DBs
Position
1:16492947..16513595
Genome browser
AA seq
1080 aa
AA seq
DB search
MGSYRTLTLPLLSLLGWTLTSAFNLDADNVIRKTGDANSLFGFSLAMHRQLRPADKRMLL
VGAPKAKALPGQKSTITGGMYNCDINSPAQSCQRVIFDNEENLASENKQNQWMGVTVQSQ
GPGGKILVCAHRYQRRLFVGSVQELRDVTGRCYVLSEDLTINNSMDEDGGDWIFCYGRNR
GHERFGSCQQGLSATFTKDFHYLVFGAPGAYNWKGVVRMEQKNSSLWEENIFDDGPYEVG
DESRLDPDLVPVPANSYLGFSLDSGKMLTKRGQLTIVAGAPRANHSGAVVLLKKDDTLPS
LLTAEYILEGAGLASSFGYDLAVLDINGDGWQDIVVGAPQYFIKDGDIGGAIYVYLNNEG
AWDKITPKRIEGAAYSMFGLAVENMGDVNLDGYHDVAVGAPYDSNGAGNVYIFHGSPEGL
KKTQVLGGKDHNVKLFGYSLAGNMDLDRNNYPDLAIGSLSDSVLVYRARSVISIEKTVTT
TPKELDLTQKNCGDTICLDVRACFKFSVKPQTYNPTLKVKYTIKVESERQKLNLPSRVIF
NPRTTNEYESTGIVDLKGQGTESCINKGLKLQETLRDKLRGIPIEVSVEIQNPSTRRKRQ
SSLPNLLPILDSNQDATTVQFIKEGCGADHVCQSDLQLQYKFHTREPNRDVFHPLPEENG
VPILSLSDQKDIALEIKVVNRGEDAYEAQLSSSFSKSLSYSAVRTKSGEKPVTCLANQNG
SQADCELGNPFKKDAETTFYIILSTGGISLDTTEVEIDLKVKTTSDQKQLQAVKAKAIVK
IQLLLSLSGIAKPSQIYFSGAVKGESAMKLTTDVGSPIDYEFRVTNLGKPLKSFGTASII
IQWPKHNSQGKWLLYLMRMTPSGLDSFSCSNQDEVNKLGLKEPSVTRTKREIGETPAKEG
TASLLTDKRKYTVLSCEEGTECVTFRCPLTGMDSNAVISLRAYLWNSTFLEDYKKLNYID
IIVKASLDFKTSATNIQLNNEPALARVTVFPEHKVAQYGGMPWWVILVAILLGLLLLGLL
VFLLYKCGFFKRSKYDDRVPSYSAVRIKREERGKEPGKEKMDPAEKKQWMTSWNENESYS
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgggatcttacaggactttaactctaccgcttcttagcttgttgggctggacgctgacc
tctgccttcaacctggacgcagacaacgttatcaggaagacgggagatgccaacagcttg
ttcggtttctcccttgccatgcaccgacaactcagaccagctgataaaagaatgttgctt
gttggtgcaccaaaagctaaagcattgcccgggcagaagtcaacaattacaggaggcatg
tacaactgtgacataaactctcccgcccagtcatgccagcgagtgatatttgacaatgaa
gaaaacctggcatctgaaaataagcaaaaccagtggatgggagttactgtacagagccag
ggacctggaggaaagatactggtctgcgctcatcgctaccagcgacgtttatttgtgggc
tcagttcaggagctgcgtgacgtgacgggtcgttgctacgtactgagtgaggacctaacg
attaataattccatggatgaagatggcggggactggatattctgctacgggagaaacaga
ggacacgagcgctttggatcatgccagcagggtctctctgccacattcacaaaggacttt
cactacctggtgtttggagcaccgggcgcttacaactggaaaggagtggtgcggatggag
cagaagaacagctctctgtgggaggagaacatcttcgatgacggcccgtatgaagttgga
gacgagagccgacttgatccagacctggtgcccgtccccgctaacagttatttaggtttc
tcgttggactctggaaaaatgctgaccaagagaggtcagttgactatagttgctggggct
ccaagagccaatcacagtggagcagttgtgctgttaaagaaggacgacactctaccatcc
ttgttaacagccgaatacatcctggagggtgccggacttgcctcttcctttggttatgat
cttgcagttcttgacattaatggagatgggtggcaggacatcgtagtcggagcacctcag
tactttattaaggacggtgatatcggtggggccatctatgtttatctcaacaacgaaggg
gcttgggacaagatcacacccaagagaattgagggagctgcttattccatgtttggtctg
gctgtggaaaacatgggagacgtgaacctggacggttatcatgatgttgccgttggtgcc
ccgtatgacagtaacggagctggaaatgtatatatcttccacggttcacccgaaggcctt
aaaaaaacccaggttcttggaggaaaagatcacaacgtgaaactctttggatactctctt
gctgggaacatggatttggacaggaataattaccccgatctggctatcggatctctctcc
gattcagtgcttgtgtacagggcacggtcagttatcagcatcgaaaagaccgtcaccacc
actccgaaggagctagacctcactcagaaaaactgtggagacactatatgccttgacgtg
agagcctgcttcaaattttcagtcaaaccccaaacctacaatcctactctgaaggtgaaa
tacactatcaaggttgaatctgaaagacagaaacttaaccttccttctagagtcatcttc
aacccgcgcacaaccaatgagtacgaaagcacgggaatcgtagatctcaagggtcagggg
acagaaagctgcattaacaaaggcctcaaactgcaggaaaccctaagagacaaactgaga
ggtatcccgattgaagtctctgtggagatccagaatccatccacacgcaggaagagacag
agctctctccctaacctgcttcccattctggactctaaccaagacgccaccaccgttcag
tttatcaaggaaggatgtggtgctgatcatgtctgtcagagtgacctgcaactacagtat
aaattccacaccagggaaccaaacagagacgtctttcatccattacccgaggaaaatgga
gttcccatcctgtctcttagtgatcagaaggacattgccttggagatcaaggtggtgaac
cggggtgaagacgcttatgaagcgcagctgtcttcctcgttctccaaatccctctcgtat
tctgctgttcgcactaaatctggcgaaaaaccggtcacctgtctagccaatcagaatggc
tcacaagccgactgtgaactcggaaatcctttcaaaaaagatgccgagacaactttctac
atcattttgagcacgggaggaatttctttggataccactgaggttgaaattgaccttaaa
gtcaaaacgacaagtgatcaaaagcagttacaagcagtcaaagccaaagccattgttaag
atccagctgctattgtctctctcaggcatcgccaagccgtctcagatctacttcagtgga
gcagttaaaggagagagtgcgatgaagctgacaactgatgtcggcagtccaattgattat
gaattcagggttacaaatttgggcaaaccccttaagtcattcggcacggcttctataatt
atccaatggccgaagcataactctcaaggcaagtggctgctgtacctcatgaggatgacc
ccatccggtttagacagcttcagctgctcaaatcaagatgaggtcaacaaactcggcttg
aaggagccttcagtgacacgaactaaacgggaaattggagaaacacctgcaaaagaagga
acggcttctctgctcactgacaagaggaaatacacagttttgtcatgcgaggaagggacg
gagtgtgtaacattcagatgtcccctaacgggaatggacagcaatgccgtcatcagcctg
agggcttacctttggaactctaccttcctggaggactataaaaaactgaactacattgat
attattgtcaaagcatcgcttgatttcaagacctccgccacaaatatacagctgaacaat
gaaccagcactggcacgtgttaccgtgtttccggagcacaaagtagcgcagtacggcggt
atgccctggtgggtcatactggtggccattttacttggactcctcttgctgggccttttg
gtcttcttgctttataagtgtggatttttcaaacgttccaagtatgacgacagagtcccc
agttatagcgctgtgcggataaagagggaagagagggggaaagagccagggaaagagaaa
atggatcctgccgagaagaaacaatggatgacttcttggaatgaaaatgagagctactcg
tag
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