Puntigrus tetrazona (Sumatra barb): 122349921
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Entry
122349921 CDS
T08985
Symbol
msi1b
Name
(RefSeq) RNA-binding protein Musashi homolog 1b isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122349921 (msi1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122349921 (msi1b)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122349921 (msi1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
NID
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
122349921
NCBI-ProteinID:
XP_043101995
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Position
8:18037240..18053841
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AA seq
373 aa
AA seq
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MPIPLSTLSASFLAPYSDGIHSRAMESEGSQSNLSSSDSPHDPCKMFIGGLSWQTTQEGL
KDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQSRHELDSKTIDPKVAF
PRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVT
FENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSSRGRARVMPYGMDAFMLGIGM
LGYPGFQAATYAGRSYTSLTPGYTYQFPEFHLERTPLLTSPHPPELTAIPLTAYNPMAAA
AAAAAVVRGSTPSRSAGFLGTSSPGPMADLYGTANQDSAVSSYISAASPAPSTGFSHSLG
GPLIATAFTNGYH
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgccaatccccctctccacactttctgcctcctttctcgcaccgtactcggacgggata
cacagccgcgcaatggagtcggaaggcagccaaagtaacctgtcctcctcggactcgccg
cacgacccctgtaaaatgttcatcggtggtctgagctggcagactacgcaagagggtttg
aaggactacttctgcaagtttggtgaagtgaaagagagtatggtgatgagagatccggtt
acaaaacgctcgaggggtttcggatttgtcacgtttgttgaccaagctggtgtggacaaa
gtcctggcccagtccagacatgagctggactcgaaaaccattgacccgaaagttgccttc
ccgcgacgagcccagcctaagttggtgactcggacaaagaaaatctttgttggaggcctg
tcggtgaacactactattgaagatgtaaagcagtacttcgaccagttcggaaaggtggat
gacgccatgcttatgtttgacaaaaccaccaacagacacagagggttcggatttgtgacc
tttgagaatgaagacgtggtggagaaagtctgcgagatccacttccacgaaatcaacaac
aagatggtggagtgtaagaaggcccagcccaaggaagtgatgtcgcccacaggctcttca
agaggtcgtgctcgtgtcatgccctatgggatggacgcctttatgctcggcataggaatg
ctgggttacccagggttccaggcagcaacatatgctggtcgcagctatactagtctcaca
ccaggatacacgtatcagttccccgaattccacttagagaggaccccccttctgacatca
ccccacccccctgagctcacagccattcctctgacggcgtacaaccccatggcggcagcc
gcagcagcagcagctgtggtcagaggctcaactccttctcgctcagctgggtttttaggt
accagcagccctgggccgatggcagacctgtacgggacggccaatcaggactcagccgtc
agtagctacatcagcgctgcaagccccgcccccagcaccggattcagccacagcctcggg
ggccctctgattgccacagcatttactaacggctaccattga
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