Puntigrus tetrazona (Sumatra barb): 122349936
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Entry
122349936 CDS
T08985
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122349936 (apex2)
Enzymes [BR:
ptet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
122349936 (apex2)
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
122349936 (apex2)
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
122349936
NCBI-ProteinID:
XP_043102012
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Position
8:complement(11229329..11232003)
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AA seq
556 aa
AA seq
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MKIVTWNINGIRTFKNGIKKILDSFDADIICVQETKVTRDLLDEKTAIVDGYNSYFSFSR
GRSGYSGVATYCKDAATPFLAEEGLTGLLTNHGEAVGCYGDQVELSSEELLALDNEGRAV
ITQHHFIGKDGPQKLTVINVYCPRADPEKPERKHYKLQFYQLLQCRAEAILSSGSHVIVL
GDVNTSHRPIDHCDPDDVDNFEDNPGRKWLDHFLFGTADEDELADISQKSASGGKFVDSF
RHFHPKRSNAFTCWSTLTGARQTNYGTRIDYIFTDHCLVKSALTGVDIMPEVEGSDHCPV
WAELSCTLQSSPKCPPLCTRHMPEFTGRQQKLSRFFGKVSEKERFSKVSEEGLPGSQDSG
EIRENLNPKVQGNNVGKKRPTCREKDANANKAKRSNQMKTESNAKGSLLAFFKPTQTPSV
PSSGNLSPKQTKSSQDSLGSERDIRSCSRDVQMETNLSLVTDIETDNQDKVEGESTCMVK
SKDCKKEPTTGFWKAVLHGPPQPPLCKSHNEPCVLRTVKKSGPNLGRQFFVCARPQGHAS
NPQARCNFFTWVDKGK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtaacatggaacataaacggtatacgaacgtttaaaaatggcatcaagaaa
attctggattcattcgatgccgatataatctgcgttcaagagactaaagtaacccgtgac
ctgttggatgagaagacggcgattgttgatggctacaattcatactttagttttagccga
ggacgaagcggatattcgggggtagcgacctactgtaaggatgccgctactccattcctc
gctgaggaaggattgacaggtctgctgacaaatcacggagaggctgtcggttgctatggt
gaccaggttgagttatccagtgaggagcttttggcgctggacaacgaaggaagggctgtc
atcactcagcatcacttcattggcaaagatggaccacagaagctcaccgttatcaacgtt
tattgtccccgagctgatccagaaaagcctgagagaaaacattacaagctccagttttac
cagctcctccaatgcagagctgaagccatcctgagctcagggagtcacgtgattgtactg
ggagatgttaatacttctcatcgacccatagaccactgtgacccagatgatgtggataac
tttgaagataatcctgggagaaagtggctggatcattttctgtttggaacggcagatgaa
gatgaactcgcagacatctcccagaaatcagcctctggtggcaagtttgtcgactccttt
cgccatttccacccaaagcgctccaacgccttcacgtgctggtccacgctcacgggtgcc
aggcagaccaactatggcacacgaatcgactacatcttcaccgaccactgtctggtgaag
tctgcccttactggagtggacattatgccggaggtggagggatccgatcactgtcccgta
tgggcggagctcagctgtaccctccagtctagtcccaagtgcccacccctgtgcacacgt
cacatgccagagttcacgggcagacaacagaaactctcgcgcttctttggcaaagtttca
gagaaagagaggttttctaaagtctccgaagagggtctacctggatcacaggattctgga
gagattcgcgaaaacctgaatcccaaagtacagggaaataatgttggaaagaagagacct
acatgtagagaaaaagatgcaaatgcaaacaaagccaaaagaagcaatcaaatgaaaacc
gaaagcaatgctaaaggaagtcttttagctttctttaagcctacacaaacaccatctgtc
ccttccagtggaaacttgagcccgaaacagacaaaatcctctcaggatagcctaggtagt
gagagagacattaggagctgctctagagatgttcaaatggagaccaatctttctttggta
acggatatagagactgacaatcaggataaagtagaaggagagtcaacatgtatggtcaag
tcaaaggactgtaagaaggagccgaccactggattttggaaagcggttttgcatgggcct
cctcaacccccactgtgtaaatcacacaatgagccctgtgtcttacggactgtgaaaaaa
tcaggacctaatttagggcggcagttttttgtttgtgctcgtcctcaaggccatgcctcc
aatcctcaggccaggtgtaatttttttacctgggtagataaagggaagtag
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